FFCP PHASE1:Hg19::chr8:27528777..27528800,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr8:27528777..27528800,+ | |||
|description=CAGE_peak_at_chr8:27528777..27528800,+ | |||
|id=chr8:27528777..27528800,+ | |||
|ontology_enrichment_celltype=CL:0000055!1.15e-10!180;CL:0000057!1.84e-08!75;CL:0000499!2.76e-08!27;CL:0000327!3.72e-07!14 | |||
|ontology_enrichment_celltype_v019=CL:0000153;3.15e-14;9!CL:0000447;3.15e-14;9!CL:0002582;8.48e-12;3!CL:0000327;4.70e-11;15!CL:0000138;3.08e-10;6!CL:0000499;3.59e-09;28!CL:0002583;5.02e-09;2!CL:0002602;4.64e-08;2!CL:0002334;9.48e-08;12!CL:0002570;1.26e-07;8 | |||
|ontology_enrichment_celltype_v019_2=CL:0000153,7.42e-15,9;CL:0000447,7.42e-15,9;CL:0002582,2.97e-12,3;CL:0000327,1.56e-11,15;CL:0000058,1.27e-10,6;CL:0000138,1.27e-10,6;CL:0000499,1.68e-09,28;CL:0002583,5.80e-09,2;CL:0002602,4.51e-08,2;CL:0002334,6.63e-08,12;CL:0002570,7.59e-08,8 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000033!8.80e-11!123;UBERON:0000153!9.03e-10!129;UBERON:0007811!9.03e-10!129;UBERON:0000477!1.35e-09!286;UBERON:0000475!1.38e-08!365;UBERON:0003075!3.47e-08!86;UBERON:0007284!3.47e-08!86;UBERON:0000064!4.51e-08!219;UBERON:0000468!8.61e-08!659;UBERON:0004121!1.99e-07!169;UBERON:0002346!3.34e-07!90;UBERON:0000467!5.11e-07!625;UBERON:0000480!6.48e-07!626;UBERON:0000924!8.51e-07!173;UBERON:0006601!8.51e-07!173 | |||
|ontology_enrichment_uberon_v019=UBERON:0006444;4.64e-08;2!UBERON:0001995;4.64e-08;2!UBERON:0004715;4.64e-08;2!UBERON:0004905;2.99e-07;8!UBERON:0000982;2.99e-07;8!UBERON:0004770;2.99e-07;8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006444,4.51e-08,2;UBERON:0001995,4.51e-08,2;UBERON:0004715,4.51e-08,2;UBERON:0004905,1.96e-07,8;UBERON:0000982,1.96e-07,8;UBERON:0004770,1.96e-07,8 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0.261185628199839,0.245733936501509,0,0.436882744260345,0.263766978228454,1.11389717664042,1.65698687863958,0.672325146451775,0.602694528023977,0.730310090387373,0,0.738726348460727,1.42800483870977,0,0,1.09499540058307,0.125542639594803,0,0,0,0,0,0,0,0.30120591877825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0,1.80719576192283,0.50133791063589,1.88300474649071,3.9764297352555,2.43317435151318,0.0945348171640679,0.443458794925128,0.351339142772504,0.261958150995425,0.728590576585084,0,0,0,0,0,0,0,0,0,0,0.56530794192401,0,0.550236083880135,0.417989933073621,0,0,0.33472061276467,0,0.760272105718513,0.24406205754817,0.367663080345869,0,0.446498641420399,0.22452937262617,0.337834441449967,0,0,0,0,0,0,0,0.379891534993739,0,0.860509862246441,1.06400514659507,0,0,0,0,0,0,0,0,0.70296429550139,0,0,0.149448680551801,0.469737994575059,0.161872944368132,0,0.204154171254893,0.982674538494144,0.103325781175765,0,0.247266929278557,0.910161361938026,0.718618141816238,0.673344455816265,0.875829639103749,0.831192346452549,0,0.30648779579902,0.300476117813194,0.113432183160021,0.358779271377724,0,0.211931901159562,0.600182192168805,0.412210116953756,0,0,0.506328996723799,0.194874010322397,0.504867548488229,0.368199594569197,0.484938170456436,1.06502877754984,0.201504196455281,0.339121184620975,0,0,0,0.121973706129595,0.132529768321485,0.232387885739037,0.10366105501537,0.504641701751257,0,0,0,0,0,0,0.354920400119532,0.674338760312407,0,0.882351781859152,0.871517776369625,0.237270619111097,0.404493924480493,0.588664395376038,0.38474715694639,0,1.40241773803446,0,1.47008711385542,0,0,0,0,0,0.514703430895577,0,0,0.201057944823262,0.185176890317059,0,2.07986957055916,2.88662684050547,0.231860809950154,0.352226082707465,0,0,0,0,0,0,0,0,0.93733833986777,0,0.283550194484773,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.336393253036082,0.43596006883328,0.80672114403045,0,0,0.845302752556,0,0,1.02882949704857,0,2.1313774321288,0,0.542621605391443,0,0,0,0,0,0,0,0,0,0,0.718874566474748,0,0,0,0.821905290201534,0,0,0,0,0,0.254094624222463,0,0,0.837581326671744,3.18969375826582,0,0,0,0.981531933753119,0,0.542530047399471,0.207970861530807,0.356857977594324,0,0,0,0,0,0.664225598535437,0.553107505625109,0.0868836144680828,0.783204629850962,1.37257369524342,0,0,0,1.21251028578504,3.32870879020994,0.907170879989041,0,0,0.280660094433074,0.256278298511402,0.511707249066704,0.321707842287215,0,4.00945203886904,2.13074070375753,1.97105174433142,1.55776328755086,4.53220475993841,0.120859449591622,0,0,0.229628896329213,0.910455840033585,0.524497659837696,0,0.231046011313244,1.56869953835371,0,0.105551628892876,1.13733384070897,0.170093705276516,0.431831832204279,0,0,1.00337954770971,0,0,0,0,0,0.256450125116389,0.328014645699706,0,0,0,0,0,0,0,0.193341436584244,0.924291702687866,0,0.275673144969061,0.429680979473094,0.435050081742686,0,0.356128142586949,0,0,0,0,0.464845549297286,0,1.3940745403212,0,0,0,0,0,0,0.316379424718726,0,0,0.42793898803392,0,0,0,0.274537029736055,0.117812402345686,0.202182481573316,0,0,0,0,0,0,0.141405431953713,1.13008116620243,0,1.32687795048244,0.438450885253763,0.578775534266688,0.655894752046633,0,0.30982349809975,0.281695602532241,0,0,0,0.354761064070598,1.68886108238131,1.64647446479951,0.379473173765715,2.44954304171488,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.735120647943095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.47748896947538,0.593929361665277,0,0.994147647766298,0.984685914873589,0.333926115068718,0,0,0.996239941255349,0,0,0.409074730008619,0,0,0,0,0,0.493217028184668,0,0,0,0,0,0,0,0,0,0,0,0,0.291604613383254,0.347249989866585,0,1.20596438625408,0,0.663475559587348,0,0,0,0,0.230850775511391,0,0,0.0897576444097721,0.108647371922008,0.957003479195758,1.4655614944298,0.533034776018635,0,0,0.166211681900156,0,0,0,0,0,0,0.163232808159148,0,0,0,0,0,0,0,0,0.134802265961354,0,0,0,0,0,0.394584402849391,0,0,0.505492637027904,0,0.103688191397247,0,0,0,0,0,0,0.173559738335131,0.0979923974143777,0.0870592065804026,0.52418000472609,0,0.774050650312681,0.511625219603299,0.656923656425674,0,0.0882561266915003,0.225980740780532,0,0.19871461170299,0.0633107959558787,0.195551382734803,0,0.213452994739353,0,0.144090417154106,0,0,0,0.124252535565433,0,0.67952103036807,0.313808538937,0.305994652908965,0.577901179803038,0,0.136905378891993,0,0,0,0,0,0,1.39775300349294,0,0,0,0,0,0.0787831823072236,0.0824158583811665,0.0674035438541849,0.0984274815147488,0,0,0.953423842781029,0,0,0.415440338029185,0,0,0.121499113316049,0,0.0788057072991982,0,0,0,0,0,0,0,1.08599920350743,0,2.28611152076586,0,0,0.340776043570843,0.339936274560377,0,1.32506888912221,0.129282956361551,0.79339561045614,0,0,0,0,0.414239055347196,0,0,0,0,0,0,0,0,0.157054096250234,0,1.46431517882356,0.500763722825999,1.72022758707021,0.998361463831671,0.4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| |||
|short_description=p@chr8:27528777..27528800,+ | |||
}} |
Latest revision as of 17:39, 31 July 2015
Short description: | p@chr8:27528777..27528800, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr8:27528777..27528800, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
GAG secreting cell | 7.42e-15 | 9 |
carbohydrate secreting cell | 7.42e-15 | 9 |
visceral preadipocyte | 2.97e-12 | 3 |
extracellular matrix secreting cell | 1.56e-11 | 15 |
chondroblast | 1.27e-10 | 6 |
chondrocyte | 1.27e-10 | 6 |
stromal cell | 1.68e-09 | 28 |
subcutaneous preadipocyte | 5.80e-09 | 2 |
annulus pulposus cell | 4.51e-08 | 2 |
preadipocyte | 6.63e-08 | 12 |
mesenchymal stem cell of adipose | 7.59e-08 | 8 |
Ontology term | p-value | n |
---|---|---|
annulus fibrosus | 4.51e-08 | 2 |
fibrocartilage | 4.51e-08 | 2 |
annulus fibrosus disci intervertebralis | 4.51e-08 | 2 |
articulation | 1.96e-07 | 8 |
skeletal joint | 1.96e-07 | 8 |
articular system | 1.96e-07 | 8 |