FFCP PHASE1:Hg19::chr8:23160901..23160919,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr8:23160901..23160919,- to FFCP PHASE1:Hg19::chr8:23160901..23160919,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr8:23160901..23160919,- | |||
|coexpression_cluster_id=C608 | |||
|description=CAGE_peak_at_chr8:23160901..23160919,- | |||
|id=chr8:23160901..23160919,- | |||
|ontology_enrichment_celltype=CL:0000055!4.71e-18!180;CL:0000222!2.51e-15!119;CL:0000144!1.03e-13!625;CL:0000057!1.21e-13!75;CL:0000548!9.50e-12!679;CL:0000004!9.50e-12!679;CL:0000255!9.50e-12!679;CL:0002371!1.56e-11!591;CL:0000012!2.02e-11!682;CL:0000183!2.80e-09!59;CL:0000187!1.25e-08!54;CL:0002321!1.42e-08!248;CL:0000220!1.58e-08!246;CL:0000680!2.24e-08!57;CL:0000056!2.24e-08!57;CL:0000355!2.24e-08!57;CL:0000499!4.02e-08!27;CL:0000213!6.27e-08!57;CL:0000215!6.27e-08!57;CL:0000003!1.02e-07!722;CL:0000048!2.10e-07!430;CL:0000723!4.29e-07!436;CL:0000393!7.19e-07!60;CL:0000211!7.19e-07!60 | |||
|ontology_enrichment_celltype_v019=CL:0000197;3.14e-10;6!CL:0000098;3.14e-10;6!CL:0002167;3.14e-10;6!CL:0002593;3.84e-08;2!CL:0002583;1.19e-07;2!CL:0002595;4.00e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000197,3.06e-10,6;CL:0000098,3.06e-10,6;CL:0002167,3.06e-10,6;CL:0002593,2.22e-08,2;CL:0002583,5.03e-08,2;CL:0002595,2.79e-07,5 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:2394!9.55e-09!14 | |||
|ontology_enrichment_disease_v019=DOID:2394;3.06e-11;14!DOID:0060084;3.95e-11;3!DOID:127;3.95e-11;3!DOID:120;1.07e-08;27!DOID:0060072;1.89e-08;4!DOID:193;5.50e-08;29 | |||
|ontology_enrichment_disease_v019_2=DOID:0060084,2.28e-11,3;DOID:127,2.28e-11,3;DOID:2394,3.38e-11,14;DOID:120,1.19e-08,27;DOID:0060072,1.26e-08,4;DOID:193,6.05e-08,29 | |||
|ontology_enrichment_uberon=UBERON:0002049!5.81e-08!79;UBERON:0007798!5.81e-08!79;UBERON:0001637!2.21e-07!42;UBERON:0003509!2.21e-07!42;UBERON:0004572!2.21e-07!42;UBERON:0001134!3.20e-07!61;UBERON:0002036!3.20e-07!61;UBERON:0003082!3.20e-07!61;UBERON:0004872!3.28e-07!84;UBERON:0004535!3.74e-07!110;UBERON:0003914!4.03e-07!118;UBERON:0001009!5.07e-07!113;UBERON:0004290!7.13e-07!70 | |||
|ontology_enrichment_uberon_v019=UBERON:0003513;1.15e-08;7!UBERON:0002456;3.84e-08;2!UBERON:0001637;1.45e-07;42!UBERON:0003509;1.45e-07;42!UBERON:0004572;1.45e-07;42!UBERON:0003834;4.00e-07;5!UBERON:0001533;4.00e-07;5!UBERON:0004573;5.05e-07;33!UBERON:0004571;5.05e-07;33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003513,8.30e-09,7;UBERON:0002456,2.22e-08,2;UBERON:0001637,5.21e-08,42;UBERON:0003509,5.21e-08,42;UBERON:0004572,5.21e-08,42;UBERON:0003834,2.79e-07,5;UBERON:0001533,2.79e-07,5;UBERON:0004573,3.39e-07,33;UBERON:0004571,3.39e-07,33 | |||
|phase1_expression=0.181678379270557,0.856402095563933,0.704772020479856,0,0.893922188854576,0,0,0,0,0.491467873003018,0,0.436882744260345,0,0,0.662794751455832,1.34465029290355,0.602694528023977,2.19093027116212,0.975865597581014,0.123121058076788,0,0,0,0.273748850145768,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0.142169232487422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,0.670700859703636,0.383587685530591,0.361439152384566,2.00535164254356,0.869079113764942,0.795285947051099,0.973269740605272,0,0.665188192387692,0.351339142772504,0,0.364295288292542,0,0,0,0,0,0,0,0.39752481473341,0,1.04142150482278,0,1.25849830862972,2.20094433552054,0,0.775250277507987,0.35576626268671,0,0,0,0.24406205754817,0.367663080345869,1.62028389576352,0.17859945656816,0,0,0,0.949265659568129,0,0,0,0,0.993943903390637,0.506522046658319,0.794455084879313,2.29469296599051,0,0.560677600142307,0,2.71334303258876,0,0.134710672069688,0.653847612453835,0.302714855289863,0,0.234321431833797,0,0,0.149448680551801,0,0,0,0,0.368502951935304,0,0,1.23633464639278,0,0,0,0.125118519871964,0,0,0.30648779579902,0.150238058906597,0.453728732640084,2.15267562826634,0.213557388818567,0.847727604638247,0.300091096084402,0.206105058476878,2.57640540045629,0.558350568994769,0.843881661206331,0.487185025805993,1.26216887122057,0.644349290496095,0.323292113637624,2.13005755509969,0.403008392910561,0.847802961552438,0,0,0,0.121973706129595,0,0,0,0,0,1.56449532329816,0.643240938192885,0,0,0,0.354920400119532,0.337169380156203,0.482022059766964,0.441175890929576,0,0,0.134831308160164,0,0,0,5.60967095213783,0.4115740113314,0,0,0,0,0,0,0.686271241194102,0,0,0,0.0925884451585296,0,1.03993478527958,2.88662684050547,0,0.117408694235822,0.144366447761074,0,0.190254152234598,0,0,0,0,0,0,0,0,0,0,0.383382679165211,0,0,0,0,0,0,0,0,0,0.205654985406647,0,0,0.336393253036082,0.43596006883328,0.22001485746285,0.387815147273333,0,0.845302752556,0.26593811658487,2.08014873822732,0.257207374262142,0,1.0656887160644,0.285955987316295,0,0,0.65147236858747,0,0.791951872933429,0,0,0.299918973546171,0,0,0,0.718874566474748,0,0,0,0.410952645100767,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.03115498439341,7.13715955188647,4.1002627908823,1.28855556491985,0,0,0,0,0.368738337083406,0.260650843404249,0,1.02943027143257,0,0,0,0,0,0,0.248107807818777,0,1.40330047216537,0.896974044789907,0.511707249066704,1.12597744800525,0,1.3878872442239,1.9531789784444,0,0.519254429183621,0.929683027679674,0,0.40101294060657,0,0.459257792658427,1.0925470080403,0.262248829918848,0,0.0770153371044148,0,0,0.105551628892876,1.13733384070897,0.510281115829547,0.647747748306418,0,0.270946437543853,0,0,0,0.223874754722178,0,0,0.256450125116389,0.328014645699706,0,0,0,0,0,0,0,0.193341436584244,0.308097234229289,0.307007349452259,0.137836572484531,0.107420244868274,0.435050081742686,0.340906509664404,0.534192213880424,0,0,0.127612712494584,0,0.464845549297286,5.66662224295152,0,0,0,0,0,0.143124886741991,0,0,0,0.255897791311334,0,0,0,0,0.54907405947211,0.471249609382746,0,0,0,0.975267478179181,1.94970791705028,3.16950440270266,0.136499911407986,1.27264888758341,0,0,3.98063385144732,0,0,0,0.202910376962704,0.6196469961995,0.845086807596724,0.143411352204052,0.294747123039363,0.35667105148125,0,1.05553817648832,1.31717957183961,0.379473173765715,1.04980416073495,0,0,0,0,0,0,0.443430153536676,0,0,0,0,0,0,0,0,0,0.427296284509893,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.284136146806413,0,0,0,0,0,0,0,0,0,0,0,0,0,1.86623752597084,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183195186803725,0,0,0,0,0,0,0,0,0,1.05499032264014,0,0,0,0.995261931078505,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0870592065804026,0,0.687944129886466,0,0.0730893170861856,0,0,0,0,0.274083849293502,0,0,0,0.160317640503067,0,0.19980960958213,0,0,0,0,0,0,0.135904206073614,0,0.305994652908965,0,0,0,0,0.429765441419957,0,0,0,0,0.199679000498991,0,0,0,0.360299883542404,0,0,0.0824158583811665,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.62899880526114,3.45688596480507,1.30634944043764,0,0,0.511164065356265,0.226624183040251,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.327872630709804,0,0,0,0,0,0,0,0.138348634936231,0.124980407962107,0,0,0.235265819698172,0,0,1.19403842309499,0.467426619694449,0,0.568209015825267,0.50313580350515,0,0.915360273587694,0.604923695052956,0,0.147855149989634,1.11507737014592,0.449803112163605,0.155262956876259,0.414706207840855,1.06336685823198,3.65221543268214,1.05180326298053,3.80805212168795,0,1.63663793282303,0.859284456339908,0.928067519756987,1.59238355479446,0.800055529326307,0,0.336749488765919,0,0.192619830407303,0,1.30497145982606,0.680117776536817,0,0.244736704506468,0.71635536432595,0.617602894321944,0.657852148736121,1.06013487567529,0.964570191354574,0.675769762612291,0,0,1.21543982470953,0,0,0,0,0.982829546539238,0.98309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| ||
|short_description=p@chr8:23160901..23160919,- | |||
}} | }} |
Latest revision as of 17:07, 31 July 2015
Short description: | p@chr8:23160901..23160919, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr8:23160901..23160919, - |
Coexpression cluster: | C608_Smooth_mesenchymal_hepatic_Olfactory_Ewing_basal_Fibroblast |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
receptor cell | 3.06e-10 | 6 |
sensory epithelial cell | 3.06e-10 | 6 |
olfactory epithelial cell | 3.06e-10 | 6 |
smooth muscle cell of the internal thoracic artery | 2.22e-08 | 2 |
subcutaneous preadipocyte | 5.03e-08 | 2 |
smooth muscle cell of the subclavian artery | 2.79e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
trunk blood vessel | 8.30e-09 | 7 |
internal thoracic artery | 2.22e-08 | 2 |
artery | 5.21e-08 | 42 |
arterial blood vessel | 5.21e-08 | 42 |
arterial system | 5.21e-08 | 42 |
thoracic segment blood vessel | 2.79e-07 | 5 |
subclavian artery | 2.79e-07 | 5 |
systemic artery | 3.39e-07 | 33 |
systemic arterial system | 3.39e-07 | 33 |
Ontology term | p-value | n |
---|---|---|
cell type benign neoplasm | 2.28e-11 | 3 |
leiomyoma | 2.28e-11 | 3 |
ovarian cancer | 3.38e-11 | 14 |
female reproductive organ cancer | 1.19e-08 | 27 |
benign neoplasm | 1.26e-08 | 4 |
reproductive organ cancer | 6.05e-08 | 29 |