FFCP PHASE1:Hg19::chr8:23159605..23159623,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(One intermediate revision by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr8:23159605..23159623,- | |||
|coexpression_cluster_id=C608 | |||
|description=CAGE_peak_at_chr8:23159605..23159623,- | |||
|id=chr8:23159605..23159623,- | |||
|ontology_enrichment_celltype=CL:0000055!3.70e-24!180;CL:0000222!3.71e-17!119;CL:0000057!1.57e-16!75;CL:0000144!9.70e-16!625;CL:0000548!6.20e-15!679;CL:0000004!6.20e-15!679;CL:0000255!6.20e-15!679;CL:0000012!1.56e-14!682;CL:0002371!7.37e-13!591;CL:0000183!1.95e-12!59;CL:0000680!5.69e-11!57;CL:0000056!5.69e-11!57;CL:0000355!5.69e-11!57;CL:0000187!1.07e-10!54;CL:0000220!1.49e-10!246;CL:0002321!3.09e-10!248;CL:0000003!6.05e-10!722;CL:0000393!3.97e-09!60;CL:0000211!3.97e-09!60;CL:0000048!8.54e-09!430;CL:0000723!3.90e-08!436;CL:0000192!5.16e-08!42;CL:0000514!5.16e-08!42;CL:0000034!1.55e-07!444;CL:0000213!1.90e-07!57;CL:0000215!1.90e-07!57 | |||
|ontology_enrichment_celltype_v019=CL:0000197;2.25e-08;6!CL:0000098;2.25e-08;6!CL:0002167;2.25e-08;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000197,2.57e-08,6;CL:0000098,2.57e-08,6;CL:0002167,2.57e-08,6 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:2394;5.84e-09;14!DOID:0060084;1.38e-08;3!DOID:127;1.38e-08;3 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,6.17e-09,14;DOID:0060084,9.02e-09,3;DOID:127,9.02e-09,3 | |||
|ontology_enrichment_uberon=UBERON:0002049!1.77e-12!79;UBERON:0007798!1.77e-12!79;UBERON:0000914!1.21e-10!83;UBERON:0002329!1.21e-10!83;UBERON:0003077!1.21e-10!83;UBERON:0003059!1.21e-10!83;UBERON:0007282!1.21e-10!83;UBERON:0009618!1.21e-10!83;UBERON:0007285!1.21e-10!83;UBERON:0001637!3.07e-10!42;UBERON:0003509!3.07e-10!42;UBERON:0004572!3.07e-10!42;UBERON:0000055!4.87e-10!69;UBERON:0001981!1.52e-09!60;UBERON:0007500!1.52e-09!60;UBERON:0004537!1.52e-09!60;UBERON:0006965!1.52e-09!60;UBERON:0001134!1.85e-09!61;UBERON:0002036!1.85e-09!61;UBERON:0003082!1.85e-09!61;UBERON:0000490!2.18e-09!138;UBERON:0002385!2.81e-09!63;UBERON:0001015!2.81e-09!63;UBERON:0000383!2.81e-09!63;UBERON:0004535!4.26e-09!110;UBERON:0004872!9.10e-09!84;UBERON:0004290!9.95e-09!70;UBERON:0004573!1.24e-08!33;UBERON:0004571!1.24e-08!33;UBERON:0000947!1.29e-08!21;UBERON:0010191!1.29e-08!21;UBERON:0001009!1.98e-08!113;UBERON:0005256!2.65e-08!143;UBERON:0000486!3.21e-07!82;UBERON:0003914!4.27e-07!118;UBERON:0002100!4.82e-07!216 | |||
|ontology_enrichment_uberon_v019=UBERON:0003513;9.77e-07;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001637,3.95e-07,42;UBERON:0003509,3.95e-07,42;UBERON:0004572,3.95e-07,42;UBERON:0003513,7.76e-07,7 | |||
|phase1_expression=0.181678379270557,0.856402095563933,0.281908808191942,1.0007329835313,1.78784437770915,2.61701557230111,2.53299878168311,1.26343974685366,0,0,0,0,0,0.123766352960047,0,2.01697543935533,1.20538905604795,0.730310090387373,0.975865597581014,0,0.408001382488506,0.313454721478088,0,0.136874425072884,0.125542639594803,0,0,0,0,0,0,0,0,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0.639312809217652,1.0843174571537,0.50133791063589,1.30361867064741,0,1.94653948121054,0.0945348171640679,0.665188192387692,0.087834785693126,0,0,0,0,0,0,0,0,0,0.198762407366705,0,0.347140501607594,0.56530794192401,0,2.47606237746061,0.417989933073621,0,0.35576626268671,0,0,0,0.24406205754817,0.367663080345869,7.29127753093584,0.267899184852239,0.22452937262617,0,0,0,0.732806975721629,0,0,0,1.49091585508596,0.506522046658319,0.397227542439656,2.29469296599051,0.709336764396714,0.560677600142307,0,2.22000793575444,0,0,0.326923806226917,0.302714855289863,0,0,0,0,0.298897361103602,0,0,0.421352420106746,0,0.61417158655884,0.103325781175765,0,1.7308685049499,1.82032272387605,0.718618141816238,0.168336113954066,0.125118519871964,0.277064115484183,0.438977620880838,1.5324389789951,0.300476117813194,0.113432183160021,1.25572744982203,0.427114777637135,0.635795703478686,0.300091096084402,0.206105058476878,2.57640540045629,0.558350568994769,0.168776332241266,0.292311015483596,1.7670364197088,0.552299391853796,0.161646056818812,1.42003837006646,0.302256294682921,0.339121184620975,0.193260853163297,0,0,0,0,0,0.10366105501537,0,0,0,2.57296375277154,0,0.464367928031979,0.721879481669586,0.236613600079688,0.337169380156203,0.241011029883482,0.441175890929576,0,0,0.404493924480493,0.196221465125346,0,0.738155454624648,4.20725321410337,0.8231480226628,0,0,0,0,0,0,0.343135620597051,0,0,0,0,0.325808305310325,1.03993478527958,2.88662684050547,0,0.587043471179108,0.288732895522148,0,0.190254152234598,0,0,0,0,0,0,0.335964256397719,0.141775097242386,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.43596006883328,0.2933531432838,0.258543431515556,0,0.845302752556,1.06375246633948,1.04007436911366,0,0,0,0.714889968290738,0.542621605391443,0,0.325736184293735,1.06617584622764,1.58390374586686,0.602878754119172,0,0.199945982364114,0,0,0,0.958499421966331,0,0,0.289562613335158,0.410952645100767,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12269149171914,0.500170521059677,0,6.44709670745502,13.20374517099,3.94256037584837,1.17141414992713,0.601892199455438,0,0,0,0.737476674166813,0.173767228936166,0.195801157462741,0.343143423810856,0,0,0,0,0,0,0.248107807818777,0.153461973288062,0.841980283299221,0.384417447767103,0.511707249066704,1.12597744800525,0,0.925258162815933,1.42049380250502,0.0821271560138091,3.11552657510173,1.27831416305955,0,0.601519410909855,0,0.459257792658427,0.546273504020151,0.393373244878272,0,0.231046011313244,0,0,0.211103257785751,0,0.170093705276516,1.0795795805107,0,0.270946437543853,1.50506932156456,0,0,0.223874754722178,0,0,0,0,0,0,0.0915694648183434,0,0,0,1.6068392984416,0.193341436584244,0.308097234229289,0.15350367472613,0.413509717453592,0.214840489736547,0.290033387828457,0.255679882248303,1.24644849905432,0.165284915360978,0,0,0,0.464845549297286,5.03699754929024,1.3940745403212,0.616067160352178,0,0,0.37064843820784,0,0,0.632758849437452,0.190630193923825,0,0,0,0.78494864019923,0.179872457583315,0.54907405947211,0.117812402345686,0,0,0.421258456238981,0.48763373908959,2.43713489631284,0,0.682499557039929,0.848432591722276,0,0,1.32687795048244,1.75380354101505,0,0.655894752046633,1.01455188481352,0,0.845086807596724,0,0.491245205065606,2.1400263088875,0,0.211107635297664,0.987884678879706,0.379473173765715,0.349934720244983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.427296284509893,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.284136146806413,0,0.296964680832639,0,0,0,0.111308705022906,0,0,0,0,0,0.102268682502155,0,2.79935628895627,0,0,0,0,0,1.11136990144637,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.549585560411174,0.533034776018635,0,0,0,0,0,0,0,0,1.89898258075224,0,0,0,0,0.0884575645033392,0,0,0,0,0,0,0,0,0.19566461893209,0.242780379534093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.174118413160805,0,1.20390222730132,0.0967563312890851,0.0730893170861856,0.164230914106418,0,0,0,0,0,0,0,0.160317640503067,0,0.39961921916426,0,0,0,0,0,0,0.271808412147228,0.104602846312333,0,0,0,0,0,0.429765441419957,0,0,0,0,0,0,0,0,0.720599767084807,0,0,0,0,0,0,0,0,0.321506296930038,0,0,0,0,0,0,0,0.0524545881349981,0,0,0,0,0,0,1.08599920350743,1.72844298240254,1.63293680054705,0,0,0.170388021785422,0.453248366080503,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110929051536852,0.0620964029413835,0,0.249960815924213,0,0,0.941063278792687,0,0,0.895528817321244,0.701139929541673,0.554805861502613,0.189403005275089,0.754703705257725,0,0.457680136793847,1.05861646634267,0.621748802331122,0,0.796483835818512,0.449803112163605,0,0.414706207840855,1.59505028734797,2.60872530905867,1.05180326298053,2.28483127301277,0,1.09109195521536,1.61115835563733,0,3.98095888698616,0.800055529326307,0.686791410365586,0.336749488765919,0,0.385239660814607,0,0.260994291965212,0.680117776536817,0.463044948647668,0.97894681802587,0.179088841081487,0.308801447160972,0.219284049578707,0.353378291891762,1.15748422962549,0,0,0.345430341731199,0.607719912354764,0,0,0,0,3.60370833731054,0.491545817507439,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.59002175326709,0,0,0.352675943690684,3.062454773532,0,0,0,0,0,0,0,0,0,0,0,0,1.52552838186867,0,0,0,1.81534561833168,0,0,0.655087670040387,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171488009437418,0,0,0,0,0,0,0,0,1.51149313853035,0.47775168788705,0,0,0,0,0,0,0,0,0,0.118332000730565,0,0,0,0.62041277132864,0.955538938977433,0,0,0,0,0,0,0,0,0,0.118920090777569,0,0,0,0.0771741581079447,0,0,0,0,0,0,0,2.20905249094162,0,0,0,0,0,0,0,0,0,0,0,0,0,2.60396512716726,0.462175628631418,3.02838593486652,0.126166424835079,0,0.126698501011437,0,0,0,0,0,0,0,0,0,0,0,0,0.112131862580613,0,0,0.217716747896961,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr8:23159605..23159623,- | |||
}} |
Latest revision as of 17:07, 31 July 2015
Short description: | p@chr8:23159605..23159623, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr8:23159605..23159623, - |
Coexpression cluster: | C608_Smooth_mesenchymal_hepatic_Olfactory_Ewing_basal_Fibroblast |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
receptor cell | 2.57e-08 | 6 |
sensory epithelial cell | 2.57e-08 | 6 |
olfactory epithelial cell | 2.57e-08 | 6 |
Ontology term | p-value | n |
---|---|---|
artery | 3.95e-07 | 42 |
arterial blood vessel | 3.95e-07 | 42 |
arterial system | 3.95e-07 | 42 |
trunk blood vessel | 7.76e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 6.17e-09 | 14 |
cell type benign neoplasm | 9.02e-09 | 3 |
leiomyoma | 9.02e-09 | 3 |