FFCP PHASE1:Hg19::chr8:23155120..23155153,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr8:23155120..23155153,- | |||
|coexpression_cluster_id=C608 | |||
|description=CAGE_peak_at_chr8:23155120..23155153,- | |description=CAGE_peak_at_chr8:23155120..23155153,- | ||
|id=chr8:23155120..23155153,- | |id=chr8:23155120..23155153,- | ||
|ontology_enrichment_celltype=CL:0000055!5.14e-29!180;CL:0000057!2.37e-18!75;CL:0000222!6.85e-15!119;CL:0000144!1.94e-12!625;CL:0000183!2.10e-11!59;CL:0000680!6.20e-11!57;CL:0000056!6.20e-11!57;CL:0000355!6.20e-11!57;CL:0000548!1.03e-10!679;CL:0000004!1.03e-10!679;CL:0000255!1.03e-10!679;CL:0000012!3.03e-10!682;CL:0000187!3.07e-10!54;CL:0002371!4.13e-10!591;CL:0000393!5.87e-09!60;CL:0000211!5.87e-09!60;CL:0000359!2.82e-08!32;CL:0000192!3.03e-08!42;CL:0000514!3.03e-08!42;CL:0002321!4.16e-08!248;CL:0000220!5.40e-08!246;CL:0002620!1.40e-07!23 | |ontology_enrichment_celltype=CL:0000055!5.14e-29!180;CL:0000057!2.37e-18!75;CL:0000222!6.85e-15!119;CL:0000144!1.94e-12!625;CL:0000183!2.10e-11!59;CL:0000680!6.20e-11!57;CL:0000056!6.20e-11!57;CL:0000355!6.20e-11!57;CL:0000548!1.03e-10!679;CL:0000004!1.03e-10!679;CL:0000255!1.03e-10!679;CL:0000012!3.03e-10!682;CL:0000187!3.07e-10!54;CL:0002371!4.13e-10!591;CL:0000393!5.87e-09!60;CL:0000211!5.87e-09!60;CL:0000359!2.82e-08!32;CL:0000192!3.03e-08!42;CL:0000514!3.03e-08!42;CL:0002321!4.16e-08!248;CL:0000220!5.40e-08!246;CL:0002620!1.40e-07!23 | ||
|ontology_enrichment_celltype_v019=CL:0000134;8.21e-12;55!CL:0000048;3.48e-11;58!CL:0000723;2.29e-10;61!CL:0002334;1.95e-08;12!CL:0000034;1.59e-07;69!CL:0002620;2.64e-07;23!CL:0002320;4.88e-07;188 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,1.59e-16,76;CL:0000048,1.21e-10,427;CL:0000222,3.10e-10,121;CL:0000723,4.78e-10,433;CL:0000034,2.74e-09,441;CL:0002334,2.03e-08,12;CL:0002620,1.76e-07,23 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:2394!5.99e-08!14 | |||
|ontology_enrichment_disease_v019=DOID:2394;3.35e-09;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,2.85e-09,14;DOID:17,6.72e-07,5;DOID:450,6.72e-07,5;DOID:66,6.72e-07,5;DOID:423,6.72e-07,5;DOID:0080000,6.72e-07,5;DOID:11722,6.72e-07,5 | |||
|ontology_enrichment_uberon=UBERON:0002049!7.70e-12!79;UBERON:0007798!7.70e-12!79;UBERON:0004872!6.89e-11!84;UBERON:0000914!1.50e-10!83;UBERON:0002329!1.50e-10!83;UBERON:0003077!1.50e-10!83;UBERON:0003059!1.50e-10!83;UBERON:0007282!1.50e-10!83;UBERON:0009618!1.50e-10!83;UBERON:0007285!1.50e-10!83;UBERON:0001637!1.73e-10!42;UBERON:0003509!1.73e-10!42;UBERON:0004572!1.73e-10!42;UBERON:0004290!2.60e-10!70;UBERON:0002385!6.96e-10!63;UBERON:0001015!6.96e-10!63;UBERON:0000383!6.96e-10!63;UBERON:0001134!6.96e-10!61;UBERON:0002036!6.96e-10!61;UBERON:0003082!6.96e-10!61;UBERON:0004535!7.87e-10!110;UBERON:0000055!2.40e-09!69;UBERON:0001009!5.51e-09!113;UBERON:0000486!6.53e-09!82;UBERON:0001981!9.94e-09!60;UBERON:0007500!9.94e-09!60;UBERON:0004537!9.94e-09!60;UBERON:0006965!9.94e-09!60;UBERON:0004573!2.40e-08!33;UBERON:0004571!2.40e-08!33;UBERON:0003914!2.77e-08!118;UBERON:0005256!4.22e-08!143;UBERON:0002100!3.42e-07!216;UBERON:0000490!7.82e-07!138 | |ontology_enrichment_uberon=UBERON:0002049!7.70e-12!79;UBERON:0007798!7.70e-12!79;UBERON:0004872!6.89e-11!84;UBERON:0000914!1.50e-10!83;UBERON:0002329!1.50e-10!83;UBERON:0003077!1.50e-10!83;UBERON:0003059!1.50e-10!83;UBERON:0007282!1.50e-10!83;UBERON:0009618!1.50e-10!83;UBERON:0007285!1.50e-10!83;UBERON:0001637!1.73e-10!42;UBERON:0003509!1.73e-10!42;UBERON:0004572!1.73e-10!42;UBERON:0004290!2.60e-10!70;UBERON:0002385!6.96e-10!63;UBERON:0001015!6.96e-10!63;UBERON:0000383!6.96e-10!63;UBERON:0001134!6.96e-10!61;UBERON:0002036!6.96e-10!61;UBERON:0003082!6.96e-10!61;UBERON:0004535!7.87e-10!110;UBERON:0000055!2.40e-09!69;UBERON:0001009!5.51e-09!113;UBERON:0000486!6.53e-09!82;UBERON:0001981!9.94e-09!60;UBERON:0007500!9.94e-09!60;UBERON:0004537!9.94e-09!60;UBERON:0006965!9.94e-09!60;UBERON:0004573!2.40e-08!33;UBERON:0004571!2.40e-08!33;UBERON:0003914!2.77e-08!118;UBERON:0005256!4.22e-08!143;UBERON:0002100!3.42e-07!216;UBERON:0000490!7.82e-07!138 | ||
|ontology_enrichment_uberon_v019=UBERON:0002384;8.66e-08;198!UBERON:0001637;3.05e-07;42!UBERON:0003509;3.05e-07;42!UBERON:0004572;3.05e-07;42!UBERON:0004457;5.32e-07;9!UBERON:0000042;5.32e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001637,7.54e-10,42;UBERON:0003509,7.54e-10,42;UBERON:0004572,7.54e-10,42;UBERON:0002384,2.44e-07,371;UBERON:0004872,4.20e-07,83;UBERON:0004573,4.93e-07,33;UBERON:0004571,4.93e-07,33;UBERON:0007503,8.34e-07,78 | |||
|phase1_expression=1.2717486548939,1.92690471501885,2.39622486963151,3.00219895059391,1.78784437770915,0.872338524100369,2.53299878168311,0,0,0.982935746006035,0,0.218441372130172,0,0.37129905888014,0.994192127183747,1.34465029290355,3.61616716814386,0,0.975865597581014,0.246242116153576,2.24400760368678,0.626909442956176,0,0.136874425072884,0.251085279189606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.35350429851818,1.53435074212236,6.50590474292219,3.50936537445123,1.44846518960824,0.795285947051099,2.43317435151318,0.661743720148475,2.66075276955077,0.702678285545008,0,0,0,0,0,0,0,0,0,0,0,1.04142150482278,0.56530794192401,2.09749718104953,2.20094433552054,0.208994966536811,1.03366703667732,0.35576626268671,1.00416183829401,0.805658634218294,0,0.976248230192678,1.10298924103761,5.67099363517232,0.535798369704479,0.22452937262617,0,0,0,0.732806975721629,0,0,0,9.44246708221105,1.51956613997496,5.69359477496841,9.17877186396204,2.12801029319014,0.560677600142307,5.33744978648525,4.44001587150888,0.311211035399766,0.942974704487816,0.980771418680752,0.454072282934794,1.72852777344,0.234321431833797,0,0,0.298897361103602,0.469737994575059,0.323745888736263,0.140450806702248,0.204154171254893,0.61417158655884,0.103325781175765,1.18800285728205,2.71993622206413,0.910161361938026,1.43723628363248,0.505008341862199,0,0,0.438977620880838,2.75839016219118,0.751190294532984,1.02088964844019,19.3740806543971,2.98980344345994,4.23863802319124,8.70264178644767,2.98852334791473,19.0653999633766,2.04728541964749,4.38818463827292,1.85130309806277,12.3692549379616,2.57739716198438,0.484938170456436,15.620422070731,2.31729825923573,1.52604533079439,0,1.09098448236334,0,0.121973706129595,0.265059536642971,0.464775771478074,0.310983165046111,0,0,1.56449532329816,1.28648187638577,1.38134921352481,0.464367928031979,0.721879481669586,0.118306800039844,0.337169380156203,0.482022059766964,0.441175890929576,0.217879444092406,0.237270619111097,0.674156540800822,0,0,0,0,0.8231480226628,0,0,0,0,0,0,1.54411029268673,0,0,0,0,0,1.03993478527958,2.88662684050547,0,0.587043471179108,0.433099343283221,0,0.380508304469197,0,0,0,0,0,0,0.16798212819886,0,0.0895585227028483,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.672786506072164,0.87192013766656,0.80672114403045,3.23179289394444,0,5.071816515336,3.19125739901845,7.28052058379563,0.514414748524284,0,0.266422179016099,2.57360388584666,1.08524321078289,1.64648067356154,0.325736184293735,1.77695974371273,1.58390374586686,0,0,0.799783929456456,0,0,0,1.91699884393266,1.14861935834114,0,0.868687840005475,1.64381058040307,0.358121926479791,0,0,0,0,0,0,0,0,0,0.749007023947182,0,0,1.10422342547226,1.00034104211935,1.08506009479894,22.0449113222656,30.6897860731118,14.0355149380202,9.01988895443892,0.300946099727719,4.5481500811197,2.0694614258501,1.32845119707087,0.553107505625109,0.434418072340414,0.195801157462741,1.71571711905428,0,0,0,0,1.66435439510497,0.604780586659361,5.21026396419431,2.76231551918512,3.64858122762996,5.25370511948374,1.02341449813341,6.11244900345709,1.48418066444991,4.00945203886904,3.72879623157567,0.410635780069046,0,3.60252173225874,0,1.40354529212299,0,1.03333003348146,0.728364672026868,0.524497659837696,0.902399225814824,0.539107359730903,0,0,0.633309773357254,4.54933536283586,1.36074964221213,2.15915916102139,0,0.270946437543853,2.00675909541941,0.254876273045038,0,1.56712328305525,0,0,0.256450125116389,0.328014645699706,0.325378394664303,0,0.0915694648183434,0,0,0,3.21367859688319,0.676695028044854,1.84858340537573,1.07452572308291,0.689182862422653,0.751941714077915,0.580066775656914,1.44885266607372,1.60257664164127,0.330569830721956,0.192190067365106,0,0,1.85938219718914,33.0552964172172,0,0.616067160352178,0.532306030317022,0.869932992075073,0.37064843820784,1.14499909393593,0.372158369359667,0.949138274156178,0.762520775695299,0.767693373934002,0.42793898803392,0.318203247925937,2.35484592059769,1.07923474549989,1.92175920815238,0.589062011728432,0.808729926293264,0,1.26377536871694,0,2.68084838594413,4.22600587027022,2.45699840534374,3.95935209470396,1.13008116620243,2.2054613741845,1.99031692572366,2.19225442626881,0,0,1.01455188481352,0,2.53526042279017,0.717056761020258,1.47373561519682,3.21003946333125,0,1.68886108238131,3.29294892959902,1.51789269506286,0,0,0,0,0,0,0,0,0,0,0,0,0.238231775457789,0,0,0,0,0.961416640147258,0.962479855263359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.439524537815682,0,0,0,0,0,0,0,0,0.333926115068718,0,0,0.19924798825107,0.276283915531148,0,0.511343412510774,0.123084805461069,14.3078210324431,0,0,0,0.0986434056369336,0,3.33410970433911,0,0,0,0,0,0.724999575434793,0.1137934482855,0.254253650292766,0,0,0,0.347249989866585,0,0,0,0,0,0,0.21787692703798,0,0,0,0,0,0.108647371922008,0.31900115973192,2.65633020865401,1.5991043280559,0,0,0,0,0,0,0,0,6.96293612942489,0,0,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| ||
|short_description=p@chr8:23155120..23155153,- | |short_description=p@chr8:23155120..23155153,- | ||
}} | }} |
Latest revision as of 17:07, 31 July 2015
Short description: | p@chr8:23155120..23155153, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr8:23155120..23155153, - |
Coexpression cluster: | C608_Smooth_mesenchymal_hepatic_Olfactory_Ewing_basal_Fibroblast |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 1.59e-16 | 76 |
multi fate stem cell | 1.21e-10 | 427 |
mesodermal cell | 3.10e-10 | 121 |
somatic stem cell | 4.78e-10 | 433 |
stem cell | 2.74e-09 | 441 |
preadipocyte | 2.03e-08 | 12 |
skin fibroblast | 1.76e-07 | 23 |
Ontology term | p-value | n |
---|---|---|
artery | 7.54e-10 | 42 |
arterial blood vessel | 7.54e-10 | 42 |
arterial system | 7.54e-10 | 42 |
connective tissue | 2.44e-07 | 371 |
splanchnic layer of lateral plate mesoderm | 4.20e-07 | 83 |
systemic artery | 4.93e-07 | 33 |
systemic arterial system | 4.93e-07 | 33 |
epithelial vesicle | 8.34e-07 | 78 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 2.85e-09 | 14 |
musculoskeletal system disease | 6.72e-07 | 5 |
myotonic disease | 6.72e-07 | 5 |
muscle tissue disease | 6.72e-07 | 5 |
myopathy | 6.72e-07 | 5 |
muscular disease | 6.72e-07 | 5 |
myotonic dystrophy | 6.72e-07 | 5 |