FFCP PHASE1:Hg19::chr8:22576899..22576911,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr8:22576899..22576911,+ | |||
|coexpression_cluster_id=C507 | |coexpression_cluster_id=C507 | ||
|description=CAGE_peak_at_chr8:22576899..22576911,+ | |description=CAGE_peak_at_chr8:22576899..22576911,+ | ||
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|ontology_enrichment_celltype=CL:0000945!2.22e-28!24;CL:0000826!2.22e-28!24;CL:0000838!1.21e-18!52;CL:0000542!2.94e-18!53;CL:0000051!2.94e-18!53;CL:0000080!6.70e-14!6;CL:0000946!5.30e-10!1;CL:0000786!5.30e-10!1;CL:0000980!5.30e-10!1;CL:0002087!4.50e-07!119;CL:0000988!5.28e-07!182 | |ontology_enrichment_celltype=CL:0000945!2.22e-28!24;CL:0000826!2.22e-28!24;CL:0000838!1.21e-18!52;CL:0000542!2.94e-18!53;CL:0000051!2.94e-18!53;CL:0000080!6.70e-14!6;CL:0000946!5.30e-10!1;CL:0000786!5.30e-10!1;CL:0000980!5.30e-10!1;CL:0002087!4.50e-07!119;CL:0000988!5.28e-07!182 | ||
|ontology_enrichment_celltype_v019=CL:0000945;3.39e-23;24 | |ontology_enrichment_celltype_v019=CL:0000945;3.39e-23;24 | ||
|ontology_enrichment_celltype_v019_2=CL:0000945,3.31e-23,24;CL:0000826,3.31e-23,24;CL:0000838,7.73e-11,52;CL:0000542,1.23e-10,53;CL:0000051,1.23e-10,53;CL:0000988,1.11e-07,177 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease=DOID:0060058!1.32e-21!10;DOID:630!1.98e-10!1;DOID:0050177!1.98e-10!1;DOID:0050427!1.98e-10!1;DOID:0060060!4.06e-10!1;DOID:0060061!4.06e-10!1;DOID:8691!4.06e-10!1;DOID:2355!7.55e-10!1 | |ontology_enrichment_disease=DOID:0060058!1.32e-21!10;DOID:630!1.98e-10!1;DOID:0050177!1.98e-10!1;DOID:0050427!1.98e-10!1;DOID:0060060!4.06e-10!1;DOID:0060061!4.06e-10!1;DOID:8691!4.06e-10!1;DOID:2355!7.55e-10!1 | ||
|ontology_enrichment_disease_v019=DOID:630;1.67e-23;1!DOID:0050177;1.67e-23;1!DOID:0050427;1.67e-23;1 | |ontology_enrichment_disease_v019=DOID:630;1.67e-23;1!DOID:0050177;1.67e-23;1!DOID:0050427;1.67e-23;1 | ||
|ontology_enrichment_disease_v019_2=DOID:630,1.67e-23,1;DOID:0050177,1.67e-23,1;DOID:0050427,1.67e-23,1 | |||
|ontology_enrichment_uberon=UBERON:0004177!7.93e-20!7;UBERON:0002106!1.41e-12!3;UBERON:0004854!1.41e-12!3;UBERON:0009034!1.41e-12!3;UBERON:0002095!1.41e-12!3;UBERON:0004782!1.41e-12!3;UBERON:0003281!1.41e-12!3;UBERON:0009664!1.41e-12!3;UBERON:0002296!1.41e-12!3;UBERON:0005602!1.41e-12!3;UBERON:0001179!1.41e-12!3;UBERON:0006293!1.41e-12!3;UBERON:0002372!8.99e-10!1;UBERON:0001961!8.99e-10!1;UBERON:0001744!8.99e-10!1;UBERON:0001735!8.99e-10!1;UBERON:0002370!2.06e-09!4;UBERON:0005058!2.06e-09!4;UBERON:0009113!2.06e-09!4;UBERON:0003295!2.06e-09!4;UBERON:0005562!2.06e-09!4;UBERON:0002331!1.52e-08!10;UBERON:0000358!1.52e-08!10;UBERON:0000307!1.52e-08!10;UBERON:0000091!1.52e-08!10;UBERON:0000087!1.52e-08!10;UBERON:0007806!1.52e-08!10;UBERON:0008780!1.52e-08!10;UBERON:0005728!1.52e-08!10;UBERON:0001042!3.59e-08!10;UBERON:0009145!3.59e-08!10;UBERON:0006562!1.80e-07!11 | |ontology_enrichment_uberon=UBERON:0004177!7.93e-20!7;UBERON:0002106!1.41e-12!3;UBERON:0004854!1.41e-12!3;UBERON:0009034!1.41e-12!3;UBERON:0002095!1.41e-12!3;UBERON:0004782!1.41e-12!3;UBERON:0003281!1.41e-12!3;UBERON:0009664!1.41e-12!3;UBERON:0002296!1.41e-12!3;UBERON:0005602!1.41e-12!3;UBERON:0001179!1.41e-12!3;UBERON:0006293!1.41e-12!3;UBERON:0002372!8.99e-10!1;UBERON:0001961!8.99e-10!1;UBERON:0001744!8.99e-10!1;UBERON:0001735!8.99e-10!1;UBERON:0002370!2.06e-09!4;UBERON:0005058!2.06e-09!4;UBERON:0009113!2.06e-09!4;UBERON:0003295!2.06e-09!4;UBERON:0005562!2.06e-09!4;UBERON:0002331!1.52e-08!10;UBERON:0000358!1.52e-08!10;UBERON:0000307!1.52e-08!10;UBERON:0000091!1.52e-08!10;UBERON:0000087!1.52e-08!10;UBERON:0007806!1.52e-08!10;UBERON:0008780!1.52e-08!10;UBERON:0005728!1.52e-08!10;UBERON:0001042!3.59e-08!10;UBERON:0009145!3.59e-08!10;UBERON:0006562!1.80e-07!11 | ||
|ontology_enrichment_uberon_v019=UBERON:0002331;3.14e-20;10!UBERON:0000178;9.77e-14;15!UBERON:0000179;9.77e-14;15!UBERON:0000463;9.77e-14;15!UBERON:0002390;4.06e-11;32!UBERON:0000478;7.83e-09;24!UBERON:0002106;8.96e-09;3 | |ontology_enrichment_uberon_v019=UBERON:0002331;3.14e-20;10!UBERON:0000178;9.77e-14;15!UBERON:0000179;9.77e-14;15!UBERON:0000463;9.77e-14;15!UBERON:0002390;4.06e-11;32!UBERON:0000478;7.83e-09;24!UBERON:0002106;8.96e-09;3 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002331,3.25e-20,10;UBERON:0000358,3.25e-20,10;UBERON:0000307,3.25e-20,10;UBERON:0000091,3.25e-20,10;UBERON:0000087,3.25e-20,10;UBERON:0007010,3.25e-20,10;UBERON:0007806,3.25e-20,10;UBERON:0008780,3.25e-20,10;UBERON:0005728,3.25e-20,10;UBERON:0000178,9.99e-14,15;UBERON:0000179,9.99e-14,15;UBERON:0000463,9.99e-14,15;UBERON:0000478,7.94e-09,24;UBERON:0002106,8.96e-09,3;UBERON:0004854,8.96e-09,3;UBERON:0009034,8.96e-09,3;UBERON:0002095,8.96e-09,3;UBERON:0004782,8.96e-09,3;UBERON:0003281,8.96e-09,3;UBERON:0009664,8.96e-09,3;UBERON:0002296,8.96e-09,3;UBERON:0005602,8.96e-09,3;UBERON:0001179,8.96e-09,3;UBERON:0006293,8.96e-09,3 | |||
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|short_description=p@chr8:22576899..22576911,+ | |short_description=p@chr8:22576899..22576911,+ | ||
}} | }} |
Latest revision as of 17:02, 31 July 2015
Short description: | p@chr8:22576899..22576911, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr8:22576899..22576911, + |
Coexpression cluster: | C507_splenic_hairy_b_cord_B_xeroderma_mycosis |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 3.31e-23 | 24 |
pro-B cell | 3.31e-23 | 24 |
lymphoid lineage restricted progenitor cell | 7.73e-11 | 52 |
lymphocyte | 1.23e-10 | 53 |
common lymphoid progenitor | 1.23e-10 | 53 |
hematopoietic cell | 1.11e-07 | 177 |
Ontology term | p-value | n |
---|---|---|
umbilical cord | 3.25e-20 | 10 |
blastocyst | 3.25e-20 | 10 |
blastula | 3.25e-20 | 10 |
bilaminar disc | 3.25e-20 | 10 |
inner cell mass | 3.25e-20 | 10 |
cleaving embryo | 3.25e-20 | 10 |
connecting stalk | 3.25e-20 | 10 |
inner cell mass derived epiblast | 3.25e-20 | 10 |
extraembryonic mesoderm | 3.25e-20 | 10 |
blood | 9.99e-14 | 15 |
haemolymphatic fluid | 9.99e-14 | 15 |
organism substance | 9.99e-14 | 15 |
extraembryonic structure | 7.94e-09 | 24 |
spleen | 8.96e-09 | 3 |
gastrointestinal system mesentery | 8.96e-09 | 3 |
stomach region | 8.96e-09 | 3 |
mesentery | 8.96e-09 | 3 |
gastrointestinal system serosa | 8.96e-09 | 3 |
mesentery of stomach | 8.96e-09 | 3 |
gut mesentery | 8.96e-09 | 3 |
dorsal mesentery | 8.96e-09 | 3 |
dorsal mesogastrium | 8.96e-09 | 3 |
peritoneal cavity | 8.96e-09 | 3 |
spleen primordium | 8.96e-09 | 3 |
Ontology term | p-value | n |
---|---|---|
genetic disease | 1.67e-23 | 1 |
monogenic disease | 1.67e-23 | 1 |
xeroderma pigmentosum | 1.67e-23 | 1 |