FFCP PHASE1:Hg19::chr8:22034546..22034555,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr8:22034546..22034555,+ | |||
|coexpression_cluster_id=C34 | |||
|description=CAGE_peak_at_chr8:22034546..22034555,+ | |description=CAGE_peak_at_chr8:22034546..22034555,+ | ||
|id=chr8:22034546..22034555,+ | |id=chr8:22034546..22034555,+ | ||
|ontology_enrichment_celltype=CL:0002564!4.70e-08!3 | |ontology_enrichment_celltype=CL:0002564!4.70e-08!3 | ||
|ontology_enrichment_celltype_v019=CL:0002202;1.61e-18;9!CL:0002632;1.61e-18;9!CL:0000322;1.83e-14;3!CL:0000307;1.83e-14;3!CL:0002368;3.64e-13;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0002202,1.61e-18,9;CL:0002632,1.61e-18,9;CL:0000322,1.60e-14,3;CL:0000068,2.09e-14,3;CL:0000069,2.09e-14,3;CL:0000307,2.09e-14,3;CL:0000377,2.09e-14,3;CL:0002368,3.64e-13,13 | |||
|ontology_enrichment_development_v019=UBERON:0003124;6.62e-41;1!CL:0000377;1.83e-14;3!UBERON:0004872;5.08e-07;7 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3910;5.69e-21;2!DOID:3908;3.22e-09;5!DOID:1325;6.04e-07;7!DOID:3904;6.04e-07;7 | |||
|ontology_enrichment_disease_v019_2=DOID:3910,4.66e-21,2;DOID:3908,2.97e-09,5;DOID:1325,5.70e-07,7;DOID:3904,5.70e-07,7 | |||
|ontology_enrichment_uberon=UBERON:0002242!4.70e-08!3;UBERON:0003068!4.70e-08!3;UBERON:0002328!4.70e-08!3;UBERON:0004880!4.70e-08!3;UBERON:0003124!1.90e-07!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0004903;5.69e-21;2!UBERON:0002173;5.69e-21;2!UBERON:0002186;5.69e-21;2!UBERON:0004821;1.83e-14;3!UBERON:0007499;1.83e-14;3!UBERON:0003215;1.83e-14;3!UBERON:0010368;1.83e-14;3!UBERON:0009911;1.83e-14;3!UBERON:0002299;1.83e-14;3!UBERON:0006524;1.83e-14;3!UBERON:0008874;1.83e-14;3!UBERON:0002169;1.83e-14;3!UBERON:0004894;1.83e-14;3!UBERON:0007196;1.49e-11;15!UBERON:0001558;1.49e-11;15!UBERON:0001987;2.53e-11;4!UBERON:0009856;3.42e-11;4!UBERON:0003126;6.04e-07;7!UBERON:0001005;6.04e-07;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004903,4.66e-21,2;UBERON:0002173,4.66e-21,2;UBERON:0002186,4.66e-21,2;UBERON:0004821,1.60e-14,3;UBERON:0003215,1.60e-14,3;UBERON:0010368,1.60e-14,3;UBERON:0009911,1.60e-14,3;UBERON:0002299,1.60e-14,3;UBERON:0006524,1.60e-14,3;UBERON:0008874,1.60e-14,3;UBERON:0002169,1.60e-14,3;UBERON:0004894,1.60e-14,3;UBERON:0007196,1.50e-11,15;UBERON:0001558,1.50e-11,15;UBERON:0001987,2.53e-11,4;UBERON:0004340,2.53e-11,4;UBERON:0003124,5.08e-07,7;UBERON:0003126,6.39e-07,7;UBERON:0001005,6.39e-07,7 | |||
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|short_description=p@chr8:22034546..22034555,+ | |short_description=p@chr8:22034546..22034555,+ | ||
}} | }} |
Latest revision as of 16:51, 31 July 2015
Short description: | p@chr8:22034546..22034555, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr8:22034546..22034555, + |
Coexpression cluster: | C34_placenta_chorionic_choriocarcinoma_mesothelioma_Wilms_Smooth_bile |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of tracheobronchial tree | 1.61e-18 | 9 |
epithelial cell of lower respiratory tract | 1.61e-18 | 9 |
pneumocyte | 1.60e-14 | 3 |
duct epithelial cell | 2.09e-14 | 3 |
branched duct epithelial cell | 2.09e-14 | 3 |
tracheal epithelial cell | 2.09e-14 | 3 |
tracheoblast | 2.09e-14 | 3 |
respiratory epithelial cell | 3.64e-13 | 13 |
Ontology term | p-value | n |
---|---|---|
bronchoalveolar duct junction | 4.66e-21 | 2 |
alveolar duct | 4.66e-21 | 2 |
bronchiole | 4.66e-21 | 2 |
pulmonary alveolus epithelium | 1.60e-14 | 3 |
alveolus | 1.60e-14 | 3 |
pulmonary lobule | 1.60e-14 | 3 |
lobule | 1.60e-14 | 3 |
alveolus of lung | 1.60e-14 | 3 |
alveolar system | 1.60e-14 | 3 |
pulmonary acinus | 1.60e-14 | 3 |
alveolar sac | 1.60e-14 | 3 |
alveolar wall | 1.60e-14 | 3 |
tracheobronchial tree | 1.50e-11 | 15 |
lower respiratory tract | 1.50e-11 | 15 |
placenta | 2.53e-11 | 4 |
allantois | 2.53e-11 | 4 |
chorion | 5.08e-07 | 7 |
trachea | 6.39e-07 | 7 |
respiratory airway | 6.39e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
lung adenocarcinoma | 4.66e-21 | 2 |
non-small cell lung carcinoma | 2.97e-09 | 5 |
bronchus cancer | 5.70e-07 | 7 |
bronchogenic carcinoma | 5.70e-07 | 7 |