FFCP PHASE1:Hg19::chr8:144261092..144261101,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr8:144261092..144261101,- | |||
|coexpression_cluster_id=C80 | |coexpression_cluster_id=C80 | ||
|description=CAGE_peak_at_chr8:144261092..144261101,- | |description=CAGE_peak_at_chr8:144261092..144261101,- | ||
|id=chr8:144261092..144261101,- | |id=chr8:144261092..144261101,- | ||
|ontology_enrichment_celltype=CL:0001014!5.34e-20!2;CL:0001016!5.34e-20!2;CL:0000453!2.46e-17!5;CL:0000451!9.44e-14!10;CL:0000990!7.09e-10!8;CL:0000840!2.95e-07!5;CL:0001029!2.95e-07!5 | |ontology_enrichment_celltype=CL:0001014!5.34e-20!2;CL:0001016!5.34e-20!2;CL:0000453!2.46e-17!5;CL:0000451!9.44e-14!10;CL:0000990!7.09e-10!8;CL:0000840!2.95e-07!5;CL:0001029!2.95e-07!5 | ||
|ontology_enrichment_celltype_v019=CL:0001014;8.82e-51;2!CL:0001016;8.82e-51;2!CL:0000451;4.81e-21;10!CL:0000453;4.92e-21;5!CL:0000840;1.03e-17;5!CL:0000990;3.74e-12;8!CL:0000322;1.60e-09;3!CL:0000784;1.60e-09;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0001014,8.82e-51,2;CL:0001016,8.82e-51,2;CL:0000453,4.92e-21,5;CL:0000451,4.98e-21,10;CL:0000840,1.03e-17,5;CL:0001029,1.03e-17,5;CL:0000990,3.74e-12,8;CL:0000322,1.41e-09,3;CL:0000784,1.67e-09,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:1325;4.22e-15;7!DOID:3904;4.22e-15;7!DOID:3910;1.29e-13;2!DOID:3905;5.67e-12;9!DOID:1324;1.47e-07;15!DOID:5409;1.59e-07;4!DOID:0050615;3.84e-07;16 | |||
|ontology_enrichment_disease_v019_2=DOID:1325,3.79e-15,7;DOID:3904,3.79e-15,7;DOID:3910,1.07e-13,2;DOID:3905,5.22e-12,9;DOID:1324,1.40e-07,15;DOID:5409,1.59e-07,4;DOID:0050615,3.66e-07,16 | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0004903;1.29e-13;2!UBERON:0002173;1.29e-13;2!UBERON:0002186;1.29e-13;2!UBERON:0004821;1.60e-09;3!UBERON:0007499;1.60e-09;3!UBERON:0003215;1.60e-09;3!UBERON:0010368;1.60e-09;3!UBERON:0009911;1.60e-09;3!UBERON:0002299;1.60e-09;3!UBERON:0006524;1.60e-09;3!UBERON:0008874;1.60e-09;3!UBERON:0002169;1.60e-09;3!UBERON:0004894;1.60e-09;3!UBERON:0009856;1.86e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004903,1.07e-13,2;UBERON:0002173,1.07e-13,2;UBERON:0002186,1.07e-13,2;UBERON:0004821,1.41e-09,3;UBERON:0003215,1.41e-09,3;UBERON:0010368,1.41e-09,3;UBERON:0009911,1.41e-09,3;UBERON:0002299,1.41e-09,3;UBERON:0006524,1.41e-09,3;UBERON:0008874,1.41e-09,3;UBERON:0002169,1.41e-09,3;UBERON:0004894,1.41e-09,3 | |||
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|short_description=p@chr8:144261092..144261101,- | |short_description=p@chr8:144261092..144261101,- | ||
}} | }} |
Latest revision as of 15:51, 31 July 2015
Short description: | p@chr8:144261092..144261101, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr8:144261092..144261101, - |
Coexpression cluster: | C80_immature_migratory_CD14_Dendritic_splenic_cord_Mast |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD1a-positive Langerhans cell | 8.82e-51 | 2 |
immature CD1a-positive Langerhans cell | 8.82e-51 | 2 |
Langerhans cell | 4.92e-21 | 5 |
dendritic cell | 4.98e-21 | 10 |
immature conventional dendritic cell | 1.03e-17 | 5 |
common dendritic progenitor | 1.03e-17 | 5 |
conventional dendritic cell | 3.74e-12 | 8 |
pneumocyte | 1.41e-09 | 3 |
plasmacytoid dendritic cell | 1.67e-09 | 3 |
Ontology term | p-value | n |
---|---|---|
bronchoalveolar duct junction | 1.07e-13 | 2 |
alveolar duct | 1.07e-13 | 2 |
bronchiole | 1.07e-13 | 2 |
pulmonary alveolus epithelium | 1.41e-09 | 3 |
alveolus | 1.41e-09 | 3 |
pulmonary lobule | 1.41e-09 | 3 |
lobule | 1.41e-09 | 3 |
alveolus of lung | 1.41e-09 | 3 |
alveolar system | 1.41e-09 | 3 |
pulmonary acinus | 1.41e-09 | 3 |
alveolar sac | 1.41e-09 | 3 |
alveolar wall | 1.41e-09 | 3 |
Ontology term | p-value | n |
---|---|---|
bronchus cancer | 3.79e-15 | 7 |
bronchogenic carcinoma | 3.79e-15 | 7 |
lung adenocarcinoma | 1.07e-13 | 2 |
lung carcinoma | 5.22e-12 | 9 |
lung cancer | 1.40e-07 | 15 |
lung small cell carcinoma | 1.59e-07 | 4 |
respiratory system cancer | 3.66e-07 | 16 |