FFCP PHASE1:Hg19::chr8:144260966..144260967,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr8:144260966..144260967,- | |||
|coexpression_cluster_id=C330 | |||
|description=CAGE_peak_at_chr8:144260966..144260967,- | |||
|id=chr8:144260966..144260967,- | |||
|ontology_enrichment_celltype=CL:0000784!2.98e-36!3;CL:0000451!4.53e-27!10;CL:0001014!5.58e-25!2;CL:0001016!5.58e-25!2;CL:0000840!1.54e-18!5;CL:0001029!1.54e-18!5;CL:0000990!1.45e-12!8;CL:0000453!1.40e-10!5 | |||
|ontology_enrichment_celltype_v019=CL:0001014;5.04e-34;2!CL:0001016;5.04e-34;2!CL:0000451;6.20e-25;10!CL:0000322;2.62e-23;3!CL:0000784;4.09e-23;3!CL:0000453;1.60e-14;5!CL:0000840;2.45e-12;5!CL:0002202;1.04e-08;9!CL:0002632;1.04e-08;9!CL:0000990;1.12e-08;8 | |||
|ontology_enrichment_celltype_v019_2=CL:0001014,5.04e-34,2;CL:0001016,5.04e-34,2;CL:0000451,6.20e-25,10;CL:0000322,2.62e-23,3;CL:0000784,4.09e-23,3;CL:0000453,1.60e-14,5;CL:0000840,2.45e-12,5;CL:0001029,2.45e-12,5;CL:0002202,1.04e-08,9;CL:0002632,1.04e-08,9;CL:0000990,1.12e-08,8 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:1325!1.09e-07!7;DOID:3904!1.09e-07!7;DOID:3910!2.15e-07!2 | |||
|ontology_enrichment_disease_v019=DOID:3910;3.61e-34;2!DOID:3908;1.40e-14;5!DOID:1325;8.16e-11;7!DOID:3904;8.16e-11;7!DOID:3905;1.04e-08;9 | |||
|ontology_enrichment_disease_v019_2=DOID:3910,3.61e-34,2;DOID:3908,1.40e-14,5;DOID:1325,8.16e-11,7;DOID:3904,8.16e-11,7;DOID:3905,1.04e-08,9 | |||
|ontology_enrichment_uberon=UBERON:0004903!2.15e-07!2;UBERON:0002173!2.15e-07!2;UBERON:0002186!2.15e-07!2 | |||
|ontology_enrichment_uberon_v019=UBERON:0004903;3.61e-34;2!UBERON:0002173;3.61e-34;2!UBERON:0002186;3.61e-34;2!UBERON:0004821;2.62e-23;3!UBERON:0007499;2.62e-23;3!UBERON:0003215;2.62e-23;3!UBERON:0010368;2.62e-23;3!UBERON:0009911;2.62e-23;3!UBERON:0002299;2.62e-23;3!UBERON:0006524;2.62e-23;3!UBERON:0008874;2.62e-23;3!UBERON:0002169;2.62e-23;3!UBERON:0004894;2.62e-23;3!UBERON:0009856;7.35e-18;4!UBERON:0000058;5.73e-08;10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004903,3.61e-34,2;UBERON:0002173,3.61e-34,2;UBERON:0002186,3.61e-34,2;UBERON:0004821,2.62e-23,3;UBERON:0003215,2.62e-23,3;UBERON:0010368,2.62e-23,3;UBERON:0009911,2.62e-23,3;UBERON:0002299,2.62e-23,3;UBERON:0006524,2.62e-23,3;UBERON:0008874,2.62e-23,3;UBERON:0002169,2.62e-23,3;UBERON:0004894,2.62e-23,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.260118695119756,0,0.276350017785848,0,0,0,0,0,0,0.34362744548263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0.476981248610684,0.571994910780128,1.48583000531826,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254094624222463,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962221127255121,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.798317485731266,0.191505370132367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.08507300585533,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.674921674654501,2.32140586367385,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123935764259002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150962843566674,0.154348316215889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr8:144260966..144260967,- | |||
}} |
Latest revision as of 15:51, 31 July 2015
Short description: | p@chr8:144260966..144260967, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr8:144260966..144260967, - |
Coexpression cluster: | C330_bronchioalveolar_oral_signet_embryonic_lymphangiectasia_testis_adult |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD1a-positive Langerhans cell | 5.04e-34 | 2 |
immature CD1a-positive Langerhans cell | 5.04e-34 | 2 |
dendritic cell | 6.20e-25 | 10 |
pneumocyte | 2.62e-23 | 3 |
plasmacytoid dendritic cell | 4.09e-23 | 3 |
Langerhans cell | 1.60e-14 | 5 |
immature conventional dendritic cell | 2.45e-12 | 5 |
common dendritic progenitor | 2.45e-12 | 5 |
epithelial cell of tracheobronchial tree | 1.04e-08 | 9 |
epithelial cell of lower respiratory tract | 1.04e-08 | 9 |
conventional dendritic cell | 1.12e-08 | 8 |
Ontology term | p-value | n |
---|---|---|
bronchoalveolar duct junction | 3.61e-34 | 2 |
alveolar duct | 3.61e-34 | 2 |
bronchiole | 3.61e-34 | 2 |
pulmonary alveolus epithelium | 2.62e-23 | 3 |
alveolus | 2.62e-23 | 3 |
pulmonary lobule | 2.62e-23 | 3 |
lobule | 2.62e-23 | 3 |
alveolus of lung | 2.62e-23 | 3 |
alveolar system | 2.62e-23 | 3 |
pulmonary acinus | 2.62e-23 | 3 |
alveolar sac | 2.62e-23 | 3 |
alveolar wall | 2.62e-23 | 3 |
Ontology term | p-value | n |
---|---|---|
lung adenocarcinoma | 3.61e-34 | 2 |
non-small cell lung carcinoma | 1.40e-14 | 5 |
bronchus cancer | 8.16e-11 | 7 |
bronchogenic carcinoma | 8.16e-11 | 7 |
lung carcinoma | 1.04e-08 | 9 |