FFCP PHASE1:Hg19::chr8:133847743..133847756,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr8:133847743..133847756,+ | |||
|coexpression_cluster_id=C432 | |coexpression_cluster_id=C432 | ||
|description=CAGE_peak_at_chr8:133847743..133847756,+ | |description=CAGE_peak_at_chr8:133847743..133847756,+ | ||
|id=chr8:133847743..133847756,+ | |id=chr8:133847743..133847756,+ | ||
|ontology_enrichment_celltype=CL:0002057!9.55e-27!42;CL:0000860!6.50e-25!45;CL:0002194!2.79e-17!63;CL:0000576!2.79e-17!63;CL:0000040!2.79e-17!63;CL:0000559!2.79e-17!63;CL:0002009!9.87e-17!65;CL:0000839!1.71e-15!70;CL:0002568!2.38e-15!1;CL:0000557!2.88e-15!71;CL:0000766!3.21e-14!76;CL:0002087!6.61e-11!119;CL:0000763!2.12e-09!112;CL:0000049!2.12e-09!112;CL:0000738!4.06e-09!140;CL:0002031!2.10e-08!124;CL:0000037!3.22e-07!172;CL:0000566!3.22e-07!172;CL:0000988!9.26e-07!182 | |ontology_enrichment_celltype=CL:0002057!9.55e-27!42;CL:0000860!6.50e-25!45;CL:0002194!2.79e-17!63;CL:0000576!2.79e-17!63;CL:0000040!2.79e-17!63;CL:0000559!2.79e-17!63;CL:0002009!9.87e-17!65;CL:0000839!1.71e-15!70;CL:0002568!2.38e-15!1;CL:0000557!2.88e-15!71;CL:0000766!3.21e-14!76;CL:0002087!6.61e-11!119;CL:0000763!2.12e-09!112;CL:0000049!2.12e-09!112;CL:0000738!4.06e-09!140;CL:0002031!2.10e-08!124;CL:0000037!3.22e-07!172;CL:0000566!3.22e-07!172;CL:0000988!9.26e-07!182 | ||
|ontology_enrichment_celltype_v019=CL:0000860;1.50e-22;33!CL:0002057;1.50e-22;33!CL:0000473;4.17e-14;39!CL:0000234;4.17e-14;39!CL:0000576;9.86e-11;48!CL:0000766;2.05e-08;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.19e-19,42;CL:0002057,1.19e-19,42;CL:0000473,2.57e-17,48;CL:0000234,2.57e-17,48;CL:0002194,4.87e-14,59;CL:0000576,4.87e-14,59;CL:0000040,4.87e-14,59;CL:0000559,4.87e-14,59;CL:0002009,1.29e-13,61;CL:0000839,1.15e-12,66;CL:0000557,1.71e-12,67;CL:0000766,1.07e-11,72;CL:0000763,4.22e-08,108;CL:0000049,4.22e-08,108;CL:0002087,1.17e-07,115;CL:0002031,2.26e-07,120 | |||
|ontology_enrichment_development_v019=CL:0002057;8.94e-15;42 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.25e-15!102;UBERON:0003061!1.25e-15!102;UBERON:0002193!3.83e-14!112;UBERON:0002405!1.00e-13!115;UBERON:0002371!1.79e-13!80;UBERON:0001474!1.75e-12!86;UBERON:0004765!1.63e-10!101;UBERON:0001434!1.63e-10!101;UBERON:0003081!3.47e-08!216 | |ontology_enrichment_uberon=UBERON:0002390!1.25e-15!102;UBERON:0003061!1.25e-15!102;UBERON:0002193!3.83e-14!112;UBERON:0002405!1.00e-13!115;UBERON:0002371!1.79e-13!80;UBERON:0001474!1.75e-12!86;UBERON:0004765!1.63e-10!101;UBERON:0001434!1.63e-10!101;UBERON:0003081!3.47e-08!216 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,3.92e-11,76;UBERON:0001474,2.17e-10,82;UBERON:0004765,1.51e-09,90;UBERON:0002405,2.87e-09,93;UBERON:0002390,7.68e-09,98;UBERON:0003061,7.68e-09,98;UBERON:0001434,1.11e-08,100;UBERON:0002193,4.22e-08,108 | |||
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|short_description=p@chr8:133847743..133847756,+ | |short_description=p@chr8:133847743..133847756,+ | ||
}} | }} |
Latest revision as of 15:13, 31 July 2015
Short description: | p@chr8:133847743..133847756, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr8:133847743..133847756, + |
Coexpression cluster: | C432_CD14_choriocarcinoma_Peripheral_CD34_Mast_Fibroblast_granulocyte |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 1.19e-19 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.19e-19 | 42 |
defensive cell | 2.57e-17 | 48 |
phagocyte | 2.57e-17 | 48 |
monopoietic cell | 4.87e-14 | 59 |
monocyte | 4.87e-14 | 59 |
monoblast | 4.87e-14 | 59 |
promonocyte | 4.87e-14 | 59 |
macrophage dendritic cell progenitor | 1.29e-13 | 61 |
myeloid lineage restricted progenitor cell | 1.15e-12 | 66 |
granulocyte monocyte progenitor cell | 1.71e-12 | 67 |
myeloid leukocyte | 1.07e-11 | 72 |
myeloid cell | 4.22e-08 | 108 |
common myeloid progenitor | 4.22e-08 | 108 |
nongranular leukocyte | 1.17e-07 | 115 |
hematopoietic lineage restricted progenitor cell | 2.26e-07 | 120 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 3.92e-11 | 76 |
bone element | 2.17e-10 | 82 |
skeletal element | 1.51e-09 | 90 |
immune system | 2.87e-09 | 93 |
hematopoietic system | 7.68e-09 | 98 |
blood island | 7.68e-09 | 98 |
skeletal system | 1.11e-08 | 100 |
hemolymphoid system | 4.22e-08 | 108 |