FFCP PHASE1:Hg19::chr8:133847581..133847588,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr8:133847581..133847588,- | |||
|coexpression_cluster_id=C432 | |||
|description=CAGE_peak_at_chr8:133847581..133847588,- | |description=CAGE_peak_at_chr8:133847581..133847588,- | ||
|id=chr8:133847581..133847588,- | |id=chr8:133847581..133847588,- | ||
|ontology_enrichment_celltype=CL:0000860!1.15e-35!45;CL:0002057!1.13e-32!42;CL:0002194!1.62e-24!63;CL:0000576!1.62e-24!63;CL:0000040!1.62e-24!63;CL:0000559!1.62e-24!63;CL:0002009!1.03e-23!65;CL:0000766!1.96e-23!76;CL:0000839!6.59e-22!70;CL:0000557!1.41e-21!71;CL:0000763!2.75e-15!112;CL:0000049!2.75e-15!112;CL:0002087!2.84e-14!119;CL:0000738!9.02e-14!140;CL:0002031!1.40e-11!124;CL:0000037!8.70e-11!172;CL:0000566!8.70e-11!172;CL:0000988!4.56e-10!182;CL:0002032!1.06e-09!165;CL:0000837!1.06e-09!165 | |ontology_enrichment_celltype=CL:0000860!1.15e-35!45;CL:0002057!1.13e-32!42;CL:0002194!1.62e-24!63;CL:0000576!1.62e-24!63;CL:0000040!1.62e-24!63;CL:0000559!1.62e-24!63;CL:0002009!1.03e-23!65;CL:0000766!1.96e-23!76;CL:0000839!6.59e-22!70;CL:0000557!1.41e-21!71;CL:0000763!2.75e-15!112;CL:0000049!2.75e-15!112;CL:0002087!2.84e-14!119;CL:0000738!9.02e-14!140;CL:0002031!1.40e-11!124;CL:0000037!8.70e-11!172;CL:0000566!8.70e-11!172;CL:0000988!4.56e-10!182;CL:0002032!1.06e-09!165;CL:0000837!1.06e-09!165 | ||
|ontology_enrichment_celltype_v019=CL:0000860;4.43e-16;33!CL:0002057;4.43e-16;33!CL:0002393;1.63e-15;6!CL:0002397;1.63e-15;6!CL:0000766;1.25e-12;69!CL:0000576;1.26e-12;48!CL:0000771;3.06e-12;2!CL:0000473;9.61e-11;39!CL:0000234;9.61e-11;39!CL:0000226;1.12e-08;3!CL:0000842;1.12e-08;3!CL:0002087;1.97e-08;104 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.56e-25,42;CL:0002057,1.56e-25,42;CL:0000473,2.40e-22,48;CL:0000234,2.40e-22,48;CL:0000766,4.21e-19,72;CL:0002194,7.09e-18,59;CL:0000576,7.09e-18,59;CL:0000040,7.09e-18,59;CL:0000559,7.09e-18,59;CL:0002009,2.68e-17,61;CL:0000839,5.29e-16,66;CL:0000557,9.11e-16,67;CL:0000738,8.37e-13,136;CL:0000763,9.65e-13,108;CL:0000049,9.65e-13,108;CL:0000771,2.59e-12,2;CL:0002087,5.75e-12,115;CL:0002393,1.18e-10,9;CL:0002397,1.18e-10,9;CL:0000037,2.50e-10,168;CL:0000988,8.62e-10,177;CL:0002031,8.49e-09,120;CL:0000226,1.12e-08,3;CL:0000842,1.12e-08,3;CL:0002032,1.74e-08,161;CL:0000837,1.74e-08,161 | |||
|ontology_enrichment_development_v019=CL:0002057;3.80e-21;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.29e-19!102;UBERON:0003061!1.29e-19!102;UBERON:0002371!5.83e-19!80;UBERON:0002193!1.12e-17!112;UBERON:0001474!1.62e-17!86;UBERON:0002405!9.16e-15!115;UBERON:0004765!1.20e-14!101;UBERON:0001434!1.20e-14!101;UBERON:0002204!4.35e-08!167;UBERON:0003081!4.52e-08!216 | |ontology_enrichment_uberon=UBERON:0002390!1.29e-19!102;UBERON:0003061!1.29e-19!102;UBERON:0002371!5.83e-19!80;UBERON:0002193!1.12e-17!112;UBERON:0001474!1.62e-17!86;UBERON:0002405!9.16e-15!115;UBERON:0004765!1.20e-14!101;UBERON:0001434!1.20e-14!101;UBERON:0002204!4.35e-08!167;UBERON:0003081!4.52e-08!216 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,4.68e-14,98;UBERON:0003061,4.68e-14,98;UBERON:0002371,6.48e-14,76;UBERON:0001474,6.68e-13,82;UBERON:0002193,9.49e-13,108;UBERON:0004765,9.34e-12,90;UBERON:0002405,2.24e-11,93;UBERON:0001434,1.41e-10,100 | |||
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|short_description=p@chr8:133847581..133847588,- | |short_description=p@chr8:133847581..133847588,- | ||
}} | }} |
Latest revision as of 15:12, 31 July 2015
Short description: | p@chr8:133847581..133847588, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr8:133847581..133847588, - |
Coexpression cluster: | C432_CD14_choriocarcinoma_Peripheral_CD34_Mast_Fibroblast_granulocyte |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 1.56e-25 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.56e-25 | 42 |
defensive cell | 2.40e-22 | 48 |
phagocyte | 2.40e-22 | 48 |
myeloid leukocyte | 4.21e-19 | 72 |
monopoietic cell | 7.09e-18 | 59 |
monocyte | 7.09e-18 | 59 |
monoblast | 7.09e-18 | 59 |
promonocyte | 7.09e-18 | 59 |
macrophage dendritic cell progenitor | 2.68e-17 | 61 |
myeloid lineage restricted progenitor cell | 5.29e-16 | 66 |
granulocyte monocyte progenitor cell | 9.11e-16 | 67 |
leukocyte | 8.37e-13 | 136 |
myeloid cell | 9.65e-13 | 108 |
common myeloid progenitor | 9.65e-13 | 108 |
eosinophil | 2.59e-12 | 2 |
nongranular leukocyte | 5.75e-12 | 115 |
intermediate monocyte | 1.18e-10 | 9 |
CD14-positive, CD16-positive monocyte | 1.18e-10 | 9 |
hematopoietic stem cell | 2.50e-10 | 168 |
hematopoietic cell | 8.62e-10 | 177 |
hematopoietic lineage restricted progenitor cell | 8.49e-09 | 120 |
single nucleate cell | 1.12e-08 | 3 |
mononuclear cell | 1.12e-08 | 3 |
hematopoietic oligopotent progenitor cell | 1.74e-08 | 161 |
hematopoietic multipotent progenitor cell | 1.74e-08 | 161 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 4.68e-14 | 98 |
blood island | 4.68e-14 | 98 |
bone marrow | 6.48e-14 | 76 |
bone element | 6.68e-13 | 82 |
hemolymphoid system | 9.49e-13 | 108 |
skeletal element | 9.34e-12 | 90 |
immune system | 2.24e-11 | 93 |
skeletal system | 1.41e-10 | 100 |