FFCP PHASE1:Hg19::chr8:133846294..133846325,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr8:133846294..133846325,+ | |||
|coexpression_cluster_id=C432 | |coexpression_cluster_id=C432 | ||
|description=CAGE_peak_at_chr8:133846294..133846325,+ | |description=CAGE_peak_at_chr8:133846294..133846325,+ | ||
|id=chr8:133846294..133846325,+ | |id=chr8:133846294..133846325,+ | ||
|ontology_enrichment_celltype=CL:0000860;3.01e-23;33!CL:0002057;3.01e-23;33!CL:0000473;6.63e-16;39!CL:0000234;6.63e-16;39!CL:0000576;1.50e-11;48!CL:0000766;1.18e-08;69 | |ontology_enrichment_celltype=CL:0002057!1.50e-33!42;CL:0000860!4.09e-31!45;CL:0002194!5.39e-21!63;CL:0000576!5.39e-21!63;CL:0000040!5.39e-21!63;CL:0000559!5.39e-21!63;CL:0002009!2.87e-20!65;CL:0000766!1.70e-19!76;CL:0000839!1.25e-18!70;CL:0000557!2.49e-18!71;CL:0002087!1.07e-14!119;CL:0000763!5.22e-14!112;CL:0000049!5.22e-14!112;CL:0000738!1.37e-13!140;CL:0002031!3.00e-12!124;CL:0000037!1.05e-11!172;CL:0000566!1.05e-11!172;CL:0002032!6.23e-11!165;CL:0000837!6.23e-11!165;CL:0000988!7.56e-11!182;CL:0002393!2.82e-07!9;CL:0002397!2.82e-07!9 | ||
| | |ontology_enrichment_celltype_v019=CL:0000860;3.01e-23;33!CL:0002057;3.01e-23;33!CL:0000473;6.63e-16;39!CL:0000234;6.63e-16;39!CL:0000576;1.50e-11;48!CL:0000766;1.18e-08;69 | ||
|ontology_enrichment_disease= | |ontology_enrichment_celltype_v019_2=CL:0000860,4.29e-20,42;CL:0002057,4.29e-20,42;CL:0000473,1.18e-17,48;CL:0000234,1.18e-17,48;CL:0002194,3.13e-14,59;CL:0000576,3.13e-14,59;CL:0000040,3.13e-14,59;CL:0000559,3.13e-14,59;CL:0002009,8.69e-14,61;CL:0000839,8.53e-13,66;CL:0000557,1.30e-12,67;CL:0000766,8.79e-12,72;CL:0000763,5.03e-08,108;CL:0000049,5.03e-08,108;CL:0002087,1.46e-07,115;CL:0002031,2.91e-07,120 | ||
|ontology_enrichment_uberon=UBERON:0000941;7.06e-34;1!UBERON:0001785;7.06e-34;1!UBERON:0002464;7.06e-34;1!UBERON:0004904;7.06e-34;1!UBERON:0001021;7.06e-34;1!UBERON:0003714;1.07e-17;2!UBERON:0005162;1.07e-17;2!UBERON:0000122;1.07e-17;2 | |ontology_enrichment_development_v019=UBERON:0005425;7.06e-34;1!CL:0002057;1.52e-17;42!UBERON:0003056;2.89e-12;3 | ||
|ontology_enrichment_disease=DOID:4960!7.10e-08!1;DOID:0070004!7.10e-08!1;DOID:4235!8.12e-08!1 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!2.72e-18!80;UBERON:0001474!8.25e-17!86;UBERON:0002390!1.09e-15!102;UBERON:0003061!1.09e-15!102;UBERON:0002193!5.32e-14!112;UBERON:0004765!7.22e-14!101;UBERON:0001434!7.22e-14!101;UBERON:0002405!8.25e-12!115;UBERON:0000941!2.19e-08!1;UBERON:0004904!2.19e-08!1;UBERON:0002464!2.19e-08!1;UBERON:0001021!2.19e-08!1;UBERON:0001785!2.19e-08!1;UBERON:0002135!5.40e-08!1;UBERON:0002204!3.49e-07!167 | |||
|ontology_enrichment_uberon_v019=UBERON:0000941;7.06e-34;1!UBERON:0001785;7.06e-34;1!UBERON:0002464;7.06e-34;1!UBERON:0004904;7.06e-34;1!UBERON:0001021;7.06e-34;1!UBERON:0003714;1.07e-17;2!UBERON:0005162;1.07e-17;2!UBERON:0000122;1.07e-17;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000941,7.06e-34,1;UBERON:0001785,7.06e-34,1;UBERON:0002464,7.06e-34,1;UBERON:0004904,7.06e-34,1;UBERON:0001021,7.06e-34,1;UBERON:0003902,7.06e-34,1;UBERON:0005425,7.06e-34,1;UBERON:0003714,1.07e-17,2;UBERON:0005162,1.07e-17,2;UBERON:0000122,1.07e-17,2;UBERON:0002371,3.41e-11,76;UBERON:0001474,2.04e-10,82;UBERON:0004765,1.55e-09,90;UBERON:0001781,1.57e-09,4;UBERON:0002405,3.03e-09,93;UBERON:0002390,8.48e-09,98;UBERON:0003061,8.48e-09,98;UBERON:0001434,1.24e-08,100;UBERON:0002193,5.03e-08,108;UBERON:0000966,8.97e-07,6;UBERON:0005388,8.97e-07,6;UBERON:0001802,8.97e-07,6 | |||
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|short_description=p@chr8:133846294..133846325,+ | |short_description=p@chr8:133846294..133846325,+ | ||
}} | }} |
Latest revision as of 15:12, 31 July 2015
Short description: | p@chr8:133846294..133846325, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr8:133846294..133846325, + |
Coexpression cluster: | C432_CD14_choriocarcinoma_Peripheral_CD34_Mast_Fibroblast_granulocyte |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 4.29e-20 | 42 |
CD14-positive, CD16-negative classical monocyte | 4.29e-20 | 42 |
defensive cell | 1.18e-17 | 48 |
phagocyte | 1.18e-17 | 48 |
monopoietic cell | 3.13e-14 | 59 |
monocyte | 3.13e-14 | 59 |
monoblast | 3.13e-14 | 59 |
promonocyte | 3.13e-14 | 59 |
macrophage dendritic cell progenitor | 8.69e-14 | 61 |
myeloid lineage restricted progenitor cell | 8.53e-13 | 66 |
granulocyte monocyte progenitor cell | 1.30e-12 | 67 |
myeloid leukocyte | 8.79e-12 | 72 |
myeloid cell | 5.03e-08 | 108 |
common myeloid progenitor | 5.03e-08 | 108 |
nongranular leukocyte | 1.46e-07 | 115 |
hematopoietic lineage restricted progenitor cell | 2.91e-07 | 120 |
Ontology term | p-value | n |
---|---|---|
cranial nerve II | 7.06e-34 | 1 |
cranial nerve | 7.06e-34 | 1 |
nerve trunk | 7.06e-34 | 1 |
nerve connecting eye with brain | 7.06e-34 | 1 |
nerve | 7.06e-34 | 1 |
retinal neural layer | 7.06e-34 | 1 |
presumptive neural retina | 7.06e-34 | 1 |
neural tissue | 1.07e-17 | 2 |
multi cell component structure | 1.07e-17 | 2 |
neuron projection bundle | 1.07e-17 | 2 |
bone marrow | 3.41e-11 | 76 |
bone element | 2.04e-10 | 82 |
skeletal element | 1.55e-09 | 90 |
layer of retina | 1.57e-09 | 4 |
immune system | 3.03e-09 | 93 |
hematopoietic system | 8.48e-09 | 98 |
blood island | 8.48e-09 | 98 |
skeletal system | 1.24e-08 | 100 |
hemolymphoid system | 5.03e-08 | 108 |
retina | 8.97e-07 | 6 |
photoreceptor array | 8.97e-07 | 6 |
posterior segment of eyeball | 8.97e-07 | 6 |