FFCP PHASE1:Hg19::chr8:11724934..11724951,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(5 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr8:11724934..11724951,+ | |||
|coexpression_cluster_id=C2584 | |coexpression_cluster_id=C2584 | ||
|description=CAGE_peak_at_chr8:11724934..11724951,+ | |description=CAGE_peak_at_chr8:11724934..11724951,+ | ||
|id=chr8:11724934..11724951,+ | |id=chr8:11724934..11724951,+ | ||
|ontology_enrichment_celltype=CL:0002057!2.62e-56!42;CL:0000738!4.75e-56!140;CL:0002087!3.50e-52!119;CL:0000860!1.99e-51!45;CL:0000037!1.69e-49!172;CL:0000566!1.69e-49!172;CL:0002009!4.17e-48!65;CL:0002194!5.28e-48!63;CL:0000576!5.28e-48!63;CL:0000040!5.28e-48!63;CL:0000559!5.28e-48!63;CL:0002031!4.84e-47!124;CL:0000557!1.75e-46!71;CL:0000988!3.52e-46!182;CL:0000766!1.58e-44!76;CL:0002032!1.64e-43!165;CL:0000837!1.64e-43!165;CL:0000839!2.91e-43!70;CL:0000763!2.12e-36!112;CL:0000049!2.12e-36!112;CL:0002393!5.90e-14!9;CL:0002397!5.90e-14!9;CL:0000134!1.42e-10!358;CL:0002320!6.76e-10!365;CL:0000791!1.04e-08!18;CL:0000789!1.04e-08!18;CL:0002420!1.04e-08!18;CL:0002419!1.04e-08!18;CL:0000790!1.04e-08!18;CL:0000451!1.69e-08!10;CL:0000219!2.52e-08!390;CL:0000838!1.32e-07!52;CL:0000542!2.40e-07!53;CL:0000051!2.40e-07!53;CL:0000624!4.59e-07!6;CL:0000034!4.78e-07!444 | |ontology_enrichment_celltype=CL:0002057!2.62e-56!42;CL:0000738!4.75e-56!140;CL:0002087!3.50e-52!119;CL:0000860!1.99e-51!45;CL:0000037!1.69e-49!172;CL:0000566!1.69e-49!172;CL:0002009!4.17e-48!65;CL:0002194!5.28e-48!63;CL:0000576!5.28e-48!63;CL:0000040!5.28e-48!63;CL:0000559!5.28e-48!63;CL:0002031!4.84e-47!124;CL:0000557!1.75e-46!71;CL:0000988!3.52e-46!182;CL:0000766!1.58e-44!76;CL:0002032!1.64e-43!165;CL:0000837!1.64e-43!165;CL:0000839!2.91e-43!70;CL:0000763!2.12e-36!112;CL:0000049!2.12e-36!112;CL:0002393!5.90e-14!9;CL:0002397!5.90e-14!9;CL:0000134!1.42e-10!358;CL:0002320!6.76e-10!365;CL:0000791!1.04e-08!18;CL:0000789!1.04e-08!18;CL:0002420!1.04e-08!18;CL:0002419!1.04e-08!18;CL:0000790!1.04e-08!18;CL:0000451!1.69e-08!10;CL:0000219!2.52e-08!390;CL:0000838!1.32e-07!52;CL:0000542!2.40e-07!53;CL:0000051!2.40e-07!53;CL:0000624!4.59e-07!6;CL:0000034!4.78e-07!444 | ||
|ontology_enrichment_celltype_v019=CL:0000860;7.45e-85;33!CL:0002057;7.45e-85;33!CL:0000576;2.20e-64;48!CL:0000473;1.12e-61;39!CL:0000234;1.12e-61;39!CL:0000766;1.82e-41;69!CL:0002087;1.38e-21;104!CL:0002393;5.02e-20;6!CL:0002397;5.02e-20;6!CL:0000763;1.36e-19;100!CL:0000738;7.78e-15;136!CL:0000784;3.23e-11;3!CL:0000767;1.14e-10;3!CL:0000875;2.12e-10;3!CL:0002396;2.12e-10;3!CL:0000226;7.01e-10;3!CL:0000842;7.01e-10;3!CL:0000988;9.40e-10;177!CL:0000219;7.67e-07;193 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,3.77e-122,42;CL:0002057,3.77e-122,42;CL:0000473,1.16e-110,48;CL:0000234,1.16e-110,48;CL:0002009,9.18e-92,61;CL:0002194,5.64e-91,59;CL:0000576,5.64e-91,59;CL:0000040,5.64e-91,59;CL:0000559,5.64e-91,59;CL:0000557,1.22e-86,67;CL:0000766,1.68e-84,72;CL:0000839,2.84e-80,66;CL:0000738,1.05e-66,136;CL:0002087,5.55e-63,115;CL:0000763,2.91e-60,108;CL:0000049,2.91e-60,108;CL:0000037,6.96e-58,168;CL:0002031,1.41e-54,120;CL:0000988,2.84e-54,177;CL:0002032,1.87e-47,161;CL:0000837,1.87e-47,161;CL:0002393,1.16e-28,9;CL:0002397,1.16e-28,9;CL:0000134,2.08e-20,354;CL:0002320,9.54e-20,361;CL:0000219,2.03e-17,386;CL:0000034,2.36e-15,441;CL:0000048,1.42e-14,427;CL:0000723,3.52e-14,433;CL:0000784,3.24e-11,3;CL:0000767,1.18e-10,3;CL:0000875,2.37e-10,3;CL:0002396,2.37e-10,3;CL:0000226,6.60e-10,3;CL:0000842,6.60e-10,3 | |||
|ontology_enrichment_development_v019=CL:0002057;1.87e-86;42!CL:0000049;1.74e-17;108 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!6.22e-41!80;UBERON:0002390!8.81e-38!102;UBERON:0003061!8.81e-38!102;UBERON:0001474!1.02e-36!86;UBERON:0002193!3.16e-36!112;UBERON:0004765!8.89e-30!101;UBERON:0001434!8.89e-30!101;UBERON:0002405!5.00e-28!115;UBERON:0002204!2.01e-13!167;UBERON:0003081!1.45e-12!216;UBERON:0002384!5.52e-09!375 | |ontology_enrichment_uberon=UBERON:0002371!6.22e-41!80;UBERON:0002390!8.81e-38!102;UBERON:0003061!8.81e-38!102;UBERON:0001474!1.02e-36!86;UBERON:0002193!3.16e-36!112;UBERON:0004765!8.89e-30!101;UBERON:0001434!8.89e-30!101;UBERON:0002405!5.00e-28!115;UBERON:0002204!2.01e-13!167;UBERON:0003081!1.45e-12!216;UBERON:0002384!5.52e-09!375 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.14e-78,76;UBERON:0001474,4.04e-72,82;UBERON:0002390,2.44e-67,98;UBERON:0003061,2.44e-67,98;UBERON:0004765,9.88e-65,90;UBERON:0002405,2.76e-62,93;UBERON:0002193,5.00e-60,108;UBERON:0001434,3.83e-57,100;UBERON:0002204,1.26e-29,167;UBERON:0003081,4.92e-29,203;UBERON:0002384,7.59e-19,371;UBERON:0000926,2.47e-14,315;UBERON:0004120,2.47e-14,315;UBERON:0006603,2.47e-14,315 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.4407426443737,8.44424675813868,14.0882672217629,0,0,0,0,0,2.64240395401362,60.9394949385065,48.130667392834,26.2583153566181,0.223915474239924,0,0,3.05336301437086,3.40088349319928,1.94067248950253,6.74044207026485,2.46700732813095,4.02618282163635,5.17846306179871,4.35473201099471,6.62150243688039,8.96338769915208,9.03678557017357,14.8969135253776,2.44715041405386,3.0019676506363,1.79778787556068,15.610278510916,15.0836642725764,10.8687311385837,3.62836430205388,5.38551875578406,1.27867425159808,3.48251086354301,1.70215567407342,1.86846674698672,7.78870862295904,7.82224377630302,9.33912032232002,4.23779651843358,5.89244217580104,2.53169909952708,8.45021145247767,9.779797798392,11.3215668574523,11.6821776392355,5.40636814229423,4.98249318760948,10.8304842621674,6.36533367037088,6.39324538176219,0,0.546138611262131,0.889509253863555,1.70692089026603,0.400395987036012,0,0,0,1.1384259382189,1.76171156811282,2.29363936875137,5.28685314316103,2.80254281490768,0.526768169550154,0.196709770113833,0.393010762749165,0.205601498999509,0.167186495390678,0.32592226663359,0,0,0,0.589211814949674,0,0,0.128091319725675,0,0,0,0,0.14828656316206,0,1.04535523804977,0,0.766440987203842,0,0,0.637130828648193,0,0,0.150575119077773,0.255973222308837,0,0.236777252044017,0,0.604820229674197,0.534880391567015,0.289648807765598,0,0,0,0,0,0,0,0,0.0945348171640679,0,0,0,0,0,0,0.174129737299267,0.531831842075461,65.3464310596637,67.4953994720551,57.9473702074121,0.39752481473341,0,0.347140501607594,0,0,0,0,0,0,0.66944122552934,0.402829317109147,0,0,0,0,0,0,0.112611480483322,1.53316637465883,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134710672069688,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168776332241266,0,0,0,0,0,0,0,0,0,0,0,0,0.116193942869518,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144366447761074,0,0,0,0,0.246217006087397,0,0.148631162288728,0.93733833986777,0,0,0,0,0,0,0,0.621984346622316,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.10833939483032,0,0,0,0.144781306667579,0,0,0,1.18218456121156,0.646882724578552,1.41177339907723,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.3082884179662,6.90285442619574,4.69601254335155,0,1.66435439510497,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256450125116389,0,0,0,0,0,0,0,0,0,0,0,0.137836572484531,0,0,0,0.0890320356467374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0.79312517629427,0,0,0,0,0,0,0,0,0,0,0,0,0.684704037099577,0,0,0,0.1605880751037,0.605399121573143,1.27753871307098,0,0,0.223676107892416,0.333698283423817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0.110579259931225,0,0,0,0,0,0,0,0.0897576444097721,0,0.31900115973192,0,0,0,0.156980256395025,0,0,0,0,0,0,0,0,0,0.216388639742091,0,0,0,0,0,0.104421949505455,0.337005664903385,0,0.234264445725339,0.182454789215666,0,0,0,0,0,0.505492637027904,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0,3.83239764200917,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272406812223151,0,0,0,0,1.5476039091159,0.182248669974074,0,0.0788057072991982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106787412567695,0,0,0,0,0,0,0,0,0,0,0.157054096250234,0,0,0,0,0.110929051536852,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.521988583930423,0,0.463044948647668,0,0,0,0,0,0,0,0,0,0,0,0.194860308839388,0.132864840313363,0.163565394255844,0,0,0,0,0.106691729694141,0,0,0,0,0.622077260032973,0,0,0,0.327628914576042,0,0,0.123935764259002,0,0,0.0788617450012534,0,0,0,0.0642292250964595,0,0,0,0,0.0691572524642179,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163771917510097,0,0.135075169236789,0,0.206686796501184,0.0634158101939068,0,0,0,0,0,0,0,0,0,0.0887023701626388,0,0,0.203909198930495,0.0657727735628491,0,0,0.078493092850514,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.198950775161368,0,0,0,0,0,0,0,0.245148321753905,0,0,0.594092800654172,0,0,0,0.128915775947154,0,0,0,0,0,0,0.430018749454354,0,0.135982980381829,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112131862580613,0,0,0,0,0.0673520530145875,0.143444410785353,0,0,0,0,0,0,0.122241444182866,0,0,0.201273793591026,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.4407426443737,8.44424675813868,14.0882672217629,0,0,0,0,0,2.64240395401362,60.9394949385065,48.130667392834,26.2583153566181,0.223915474239924,0,0,3.05336301437086,3.40088349319928,1.94067248950253,6.74044207026485,2.46700732813095,4.02618282163635,5.17846306179871,4.35473201099471,6.62150243688039,8.96338769915208,9.03678557017357,14.8969135253776,2.44715041405386,3.0019676506363,1.79778787556068,15.610278510916,15.0836642725764,10.8687311385837,3.62836430205388,5.38551875578406,1.27867425159808,3.48251086354301,1.70215567407342,1.86846674698672,7.78870862295904,7.82224377630302,9.33912032232002,4.23779651843358,5.89244217580104,2.53169909952708,8.45021145247767,9.779797798392,11.3215668574523,11.6821776392355,5.40636814229423,4.98249318760948,10.8304842621674,6.36533367037088,6.39324538176219,0,0.546138611262131,0.889509253863555,1.70692089026603,0.400395987036012,0,0,0,1.1384259382189,1.76171156811282,2.29363936875137,5.28685314316103,2.80254281490768,0.526768169550154,0.196709770113833,0.393010762749165,0.205601498999509,0.167186495390678,0.32592226663359,0,0,0,0.589211814949674,0,0,0.128091319725675,0,0,0,0,0.14828656316206,0,1.04535523804977,0,0.766440987203842,0,0,0.637130828648193,0,0,0.150575119077773,0.255973222308837,0,0.236777252044017,0,0.604820229674197,0.534880391567015,0.289648807765598,0,0,0,0,0,0,0,0,0.0945348171640679,0,0,0,0,0,0,0.174129737299267,0.531831842075461,65.3464310596637,67.4953994720551,57.9473702074121,0.39752481473341,0,0.347140501607594,0,0,0,0,0,0,0.66944122552934,0.402829317109147,0,0,0,0,0,0,0.112611480483322,1.53316637465883,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134710672069688,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168776332241266,0,0,0,0,0,0,0,0,0,0,0,0,0.116193942869518,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144366447761074,0,0,0,0,0.246217006087397,0,0.148631162288728,0.93733833986777,0,0,0,0,0,0,0,0.621984346622316,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.10833939483032,0,0,0,0.144781306667579,0,0,0,1.18218456121156,0.646882724578552,1.41177339907723,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.3082884179662,6.90285442619574,4.69601254335155,0,1.66435439510497,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256450125116389,0,0,0,0,0,0,0,0,0,0,0,0.137836572484531,0,0,0,0.0890320356467374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0.79312517629427,0,0,0,0,0,0,0,0,0,0,0,0,0.684704037099577,0,0,0,0.1605880751037,0.605399121573143,1.27753871307098,0,0,0.223676107892416,0.333698283423817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0.110579259931225,0,0,0,0,0,0,0,0.0897576444097721,0,0.31900115973192,0,0,0,0.156980256395025,0,0,0,0,0,0,0,0,0,0.216388639742091,0,0,0,0,0,0.104421949505455,0.337005664903385,0,0.234264445725339,0.182454789215666,0,0,0,0,0,0.505492637027904,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0,3.83239764200917,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272406812223151,0,0,0,0,1.5476039091159,0.182248669974074,0,0.0788057072991982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106787412567695,0,0,0,0,0,0,0,0,0,0,0.157054096250234,0,0,0,0,0.110929051536852,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.521988583930423,0,0.463044948647668,0,0,0,0,0,0,0,0,0,0,0,0.194860308839388,0.132864840313363,0.163565394255844,0,0,0,0,0.106691729694141,0,0,0,0,0.622077260032973,0,0,0,0.327628914576042,0,0,0.123935764259002,0,0,0.0788617450012534,0,0,0,0.0642292250964595,0,0,0,0,0.0691572524642179,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163771917510097,0,0.135075169236789,0,0.206686796501184,0.0634158101939068,0,0,0,0,0,0,0,0,0,0.0887023701626388,0,0,0.203909198930495,0.0657727735628491,0,0,0.078493092850514,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.198950775161368,0,0,0,0,0,0,0,0.245148321753905,0,0,0.594092800654172,0,0,0,0.128915775947154,0,0,0,0,0,0,0.430018749454354,0,0.135982980381829,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112131862580613,0,0,0,0,0.0673520530145875,0.143444410785353,0,0,0,0,0,0,0.122241444182866,0,0,0.201273793591026,0 | ||
|short_description=p@chr8:11724934..11724951,+ | |short_description=p@chr8:11724934..11724951,+ | ||
}} | }} |
Latest revision as of 14:16, 31 July 2015
Short description: | p@chr8:11724934..11724951, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr8:11724934..11724951, + |
Coexpression cluster: | C2584_Dendritic_CD14_Basophils_CD14CD16_Peripheral_CD34_granulocyte |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.14e-78 | 76 |
bone element | 4.04e-72 | 82 |
hematopoietic system | 2.44e-67 | 98 |
blood island | 2.44e-67 | 98 |
skeletal element | 9.88e-65 | 90 |
immune system | 2.76e-62 | 93 |
hemolymphoid system | 5.00e-60 | 108 |
skeletal system | 3.83e-57 | 100 |
musculoskeletal system | 1.26e-29 | 167 |
lateral plate mesoderm | 4.92e-29 | 203 |
connective tissue | 7.59e-19 | 371 |
mesoderm | 2.47e-14 | 315 |
mesoderm-derived structure | 2.47e-14 | 315 |
presumptive mesoderm | 2.47e-14 | 315 |