FFCP PHASE1:Hg19::chr8:11710828..11710871,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr8:11710828..11710871,+ | |||
|coexpression_cluster_id=C632 | |||
|description=CAGE_peak_at_chr8:11710828..11710871,+ | |description=CAGE_peak_at_chr8:11710828..11710871,+ | ||
|id=chr8:11710828..11710871,+ | |id=chr8:11710828..11710871,+ | ||
|ontology_enrichment_celltype=CL:0000680!9.71e-09!57;CL:0000056!9.71e-09!57;CL:0000355!9.71e-09!57;CL:0000192!1.25e-08!42;CL:0000514!1.25e-08!42;CL:0000222!2.01e-08!119;CL:0000055!2.22e-08!180;CL:0000183!2.38e-08!59;CL:0000187!7.43e-08!54;CL:0002194!9.67e-08!63;CL:0000576!9.67e-08!63;CL:0000040!9.67e-08!63;CL:0000559!9.67e-08!63;CL:0002009!1.76e-07!65;CL:0002371!3.45e-07!591;CL:0000359!4.60e-07!32 | |ontology_enrichment_celltype=CL:0000680!9.71e-09!57;CL:0000056!9.71e-09!57;CL:0000355!9.71e-09!57;CL:0000192!1.25e-08!42;CL:0000514!1.25e-08!42;CL:0000222!2.01e-08!119;CL:0000055!2.22e-08!180;CL:0000183!2.38e-08!59;CL:0000187!7.43e-08!54;CL:0002194!9.67e-08!63;CL:0000576!9.67e-08!63;CL:0000040!9.67e-08!63;CL:0000559!9.67e-08!63;CL:0002009!1.76e-07!65;CL:0002371!3.45e-07!591;CL:0000359!4.60e-07!32 | ||
|ontology_enrichment_celltype_v019=CL:0000473;2.07e-08;39!CL:0000234;2.07e-08;39!CL:0000235;3.31e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002194,8.35e-11,59;CL:0000576,8.35e-11,59;CL:0000040,8.35e-11,59;CL:0000559,8.35e-11,59;CL:0002009,5.17e-10,61;CL:0000839,2.74e-08,66;CL:0000192,4.89e-08,43;CL:0000514,4.89e-08,43;CL:0000680,4.93e-08,58;CL:0000056,4.93e-08,58;CL:0000355,4.93e-08,58;CL:0000557,5.54e-08,67;CL:0000473,5.98e-08,48;CL:0000234,5.98e-08,48;CL:0000048,1.41e-07,427;CL:0000222,2.03e-07,121;CL:0000723,2.56e-07,433;CL:0000235,3.88e-07,6;CL:0000187,5.34e-07,55 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002204!8.19e-15!167;UBERON:0000468!1.13e-14!659;UBERON:0000467!1.56e-13!625;UBERON:0000480!3.03e-13!626;UBERON:0003081!4.02e-12!216;UBERON:0000926!1.55e-11!448;UBERON:0004120!1.55e-11!448;UBERON:0006603!1.55e-11!448;UBERON:0002050!5.80e-10!605;UBERON:0005423!5.80e-10!605;UBERON:0000923!1.11e-09!604;UBERON:0005291!1.11e-09!604;UBERON:0006598!1.11e-09!604;UBERON:0002532!1.11e-09!604;UBERON:0000922!1.71e-09!612;UBERON:0001637!5.42e-09!42;UBERON:0003509!5.42e-09!42;UBERON:0004572!5.42e-09!42;UBERON:0004573!7.73e-09!33;UBERON:0004571!7.73e-09!33;UBERON:0004872!1.20e-08!84;UBERON:0000490!1.59e-08!138;UBERON:0000486!3.39e-08!82;UBERON:0001981!4.27e-08!60;UBERON:0007500!4.27e-08!60;UBERON:0004537!4.27e-08!60;UBERON:0006965!4.27e-08!60;UBERON:0002049!7.90e-08!79;UBERON:0007798!7.90e-08!79;UBERON:0000055!1.03e-07!69;UBERON:0002385!2.05e-07!63;UBERON:0001015!2.05e-07!63;UBERON:0000383!2.05e-07!63;UBERON:0000914!2.33e-07!83;UBERON:0002329!2.33e-07!83;UBERON:0003077!2.33e-07!83;UBERON:0003059!2.33e-07!83;UBERON:0007282!2.33e-07!83;UBERON:0009618!2.33e-07!83;UBERON:0007285!2.33e-07!83;UBERON:0001134!3.07e-07!61;UBERON:0002036!3.07e-07!61;UBERON:0003082!3.07e-07!61;UBERON:0002405!4.35e-07!115;UBERON:0004765!6.82e-07!101;UBERON:0001434!6.82e-07!101;UBERON:0002371!7.30e-07!80;UBERON:0003914!7.47e-07!118 | |||
|ontology_enrichment_uberon_v019=UBERON:0004573;7.55e-09;33!UBERON:0004571;7.55e-09;33!UBERON:0001637;6.52e-07;42!UBERON:0003509;6.52e-07;42!UBERON:0004572;6.52e-07;42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002204,7.82e-16,167;UBERON:0000926,1.45e-15,315;UBERON:0004120,1.45e-15,315;UBERON:0006603,1.45e-15,315;UBERON:0003081,1.78e-13,203;UBERON:0004573,1.26e-09,33;UBERON:0004571,1.26e-09,33;UBERON:0002371,1.99e-09,76;UBERON:0001637,6.12e-09,42;UBERON:0003509,6.12e-09,42;UBERON:0004572,6.12e-09,42;UBERON:0002405,7.46e-09,93;UBERON:0001474,1.47e-08,82;UBERON:0000486,3.76e-08,83;UBERON:0004765,9.70e-08,90;UBERON:0001434,9.72e-08,100;UBERON:0001134,3.40e-07,62;UBERON:0002036,3.40e-07,62;UBERON:0003082,3.40e-07,62;UBERON:0002050,3.77e-07,564;UBERON:0002385,4.00e-07,64;UBERON:0001015,4.00e-07,64;UBERON:0000383,4.00e-07,64;UBERON:0004872,5.21e-07,83;UBERON:0000055,5.43e-07,68;UBERON:0000923,5.89e-07,560;UBERON:0010316,5.89e-07,560;UBERON:0005291,5.89e-07,560;UBERON:0006598,5.89e-07,560;UBERON:0010317,5.89e-07,560;UBERON:0002532,5.89e-07,560 | |||
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| ||
|short_description=p@chr8:11710828..11710871,+ | |short_description=p@chr8:11710828..11710871,+ | ||
}} | }} |
Latest revision as of 14:16, 31 July 2015
Short description: | p@chr8:11710828..11710871, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr8:11710828..11710871, + |
Coexpression cluster: | C632_Monocytederived_Macrophage_Dendritic_CD14_Keratinocyte_basal_tenocyte |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
monopoietic cell | 8.35e-11 | 59 |
monocyte | 8.35e-11 | 59 |
monoblast | 8.35e-11 | 59 |
promonocyte | 8.35e-11 | 59 |
macrophage dendritic cell progenitor | 5.17e-10 | 61 |
myeloid lineage restricted progenitor cell | 2.74e-08 | 66 |
smooth muscle cell | 4.89e-08 | 43 |
smooth muscle myoblast | 4.89e-08 | 43 |
muscle precursor cell | 4.93e-08 | 58 |
myoblast | 4.93e-08 | 58 |
multi-potent skeletal muscle stem cell | 4.93e-08 | 58 |
granulocyte monocyte progenitor cell | 5.54e-08 | 67 |
defensive cell | 5.98e-08 | 48 |
phagocyte | 5.98e-08 | 48 |
multi fate stem cell | 1.41e-07 | 427 |
mesodermal cell | 2.03e-07 | 121 |
somatic stem cell | 2.56e-07 | 433 |
macrophage | 3.88e-07 | 6 |
muscle cell | 5.34e-07 | 55 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system | 7.82e-16 | 167 |
mesoderm | 1.45e-15 | 315 |
mesoderm-derived structure | 1.45e-15 | 315 |
presumptive mesoderm | 1.45e-15 | 315 |
lateral plate mesoderm | 1.78e-13 | 203 |
systemic artery | 1.26e-09 | 33 |
systemic arterial system | 1.26e-09 | 33 |
bone marrow | 1.99e-09 | 76 |
artery | 6.12e-09 | 42 |
arterial blood vessel | 6.12e-09 | 42 |
arterial system | 6.12e-09 | 42 |
immune system | 7.46e-09 | 93 |
bone element | 1.47e-08 | 82 |
multilaminar epithelium | 3.76e-08 | 83 |
skeletal element | 9.70e-08 | 90 |
skeletal system | 9.72e-08 | 100 |
skeletal muscle tissue | 3.40e-07 | 62 |
striated muscle tissue | 3.40e-07 | 62 |
myotome | 3.40e-07 | 62 |
embryonic structure | 3.77e-07 | 564 |
muscle tissue | 4.00e-07 | 64 |
musculature | 4.00e-07 | 64 |
musculature of body | 4.00e-07 | 64 |
splanchnic layer of lateral plate mesoderm | 5.21e-07 | 83 |
vessel | 5.43e-07 | 68 |
germ layer | 5.89e-07 | 560 |
germ layer / neural crest | 5.89e-07 | 560 |
embryonic tissue | 5.89e-07 | 560 |
presumptive structure | 5.89e-07 | 560 |
germ layer / neural crest derived structure | 5.89e-07 | 560 |
epiblast (generic) | 5.89e-07 | 560 |