FFCP PHASE1:Hg19::chr8:11710161..11710184,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr8:11710161..11710184,+
|short_description=p@chr8:11710161..11710184,+
|description=CAGE_peak_at_chr8:11710161..11710184,+
|association_with_transcript=NA
|E...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr8:11710161..11710184,+ | |||
|coexpression_cluster_id=C632 | |||
|description=CAGE_peak_at_chr8:11710161..11710184,+ | |||
|id=chr8:11710161..11710184,+ | |||
|ontology_enrichment_celltype=CL:0002371!4.15e-07!591;CL:0002194!6.52e-07!63;CL:0000576!6.52e-07!63;CL:0000040!6.52e-07!63;CL:0000559!6.52e-07!63;CL:0002009!8.19e-07!65 | |||
|ontology_enrichment_celltype_v019=CL:0000235;8.83e-27;6!CL:0000840;1.89e-07;5!CL:0000135;7.73e-07;3!CL:0000388;7.73e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000235,5.91e-27,6;CL:0002194,1.26e-09,59;CL:0000576,1.26e-09,59;CL:0000040,1.26e-09,59;CL:0000559,1.26e-09,59;CL:0002009,3.17e-09,61;CL:0000839,2.49e-08,66;CL:0000557,3.62e-08,67;CL:0000840,1.87e-07,5;CL:0001029,1.87e-07,5;CL:0000766,2.02e-07,72;CL:0000135,7.32e-07,3;CL:0000388,7.32e-07,3;CL:0002619,9.74e-07,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:0060084;7.73e-07;3!DOID:127;7.73e-07;3 | |||
|ontology_enrichment_disease_v019_2=DOID:0060084,7.32e-07,3;DOID:127,7.32e-07,3 | |||
|ontology_enrichment_uberon=UBERON:0000926!1.96e-08!448;UBERON:0004120!1.96e-08!448;UBERON:0006603!1.96e-08!448;UBERON:0002204!9.29e-08!167;UBERON:0000468!1.75e-07!659;UBERON:0003081!4.82e-07!216 | |||
|ontology_enrichment_uberon_v019=UBERON:0007846;7.73e-07;3!UBERON:0000043;7.73e-07;3!UBERON:0007845;7.73e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,4.87e-08,76;UBERON:0000926,5.49e-08,315;UBERON:0004120,5.49e-08,315;UBERON:0006603,5.49e-08,315;UBERON:0001434,2.33e-07,100;UBERON:0001474,3.03e-07,82;UBERON:0003081,3.03e-07,203;UBERON:0007846,7.32e-07,3;UBERON:0000043,7.32e-07,3;UBERON:0007845,7.32e-07,3 | |||
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| ||
|short_description=p@chr8:11710161..11710184,+ | |||
}} | }} |
Latest revision as of 14:15, 31 July 2015
Short description: | p@chr8:11710161..11710184, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr8:11710161..11710184, + |
Coexpression cluster: | C632_Monocytederived_Macrophage_Dendritic_CD14_Keratinocyte_basal_tenocyte |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
macrophage | 5.91e-27 | 6 |
monopoietic cell | 1.26e-09 | 59 |
monocyte | 1.26e-09 | 59 |
monoblast | 1.26e-09 | 59 |
promonocyte | 1.26e-09 | 59 |
macrophage dendritic cell progenitor | 3.17e-09 | 61 |
myeloid lineage restricted progenitor cell | 2.49e-08 | 66 |
granulocyte monocyte progenitor cell | 3.62e-08 | 67 |
immature conventional dendritic cell | 1.87e-07 | 5 |
common dendritic progenitor | 1.87e-07 | 5 |
myeloid leukocyte | 2.02e-07 | 72 |
fibrocyte | 7.32e-07 | 3 |
tendon cell | 7.32e-07 | 3 |
adult endothelial progenitor cell | 9.74e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 4.87e-08 | 76 |
mesoderm | 5.49e-08 | 315 |
mesoderm-derived structure | 5.49e-08 | 315 |
presumptive mesoderm | 5.49e-08 | 315 |
skeletal system | 2.33e-07 | 100 |
bone element | 3.03e-07 | 82 |
lateral plate mesoderm | 3.03e-07 | 203 |
dense regular connective tissue | 7.32e-07 | 3 |
tendon | 7.32e-07 | 3 |
regular connective tissue | 7.32e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
cell type benign neoplasm | 7.32e-07 | 3 |
leiomyoma | 7.32e-07 | 3 |