FFCP PHASE1:Hg19::chr8:11702366..11702398,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr8:11702366..11702398,+ | |||
|coexpression_cluster_id=C632 | |||
|description=CAGE_peak_at_chr8:11702366..11702398,+ | |description=CAGE_peak_at_chr8:11702366..11702398,+ | ||
|id=chr8:11702366..11702398,+ | |id=chr8:11702366..11702398,+ | ||
|ontology_enrichment_celltype=CL:0002371!9.63e-10!591;CL:0002194!1.23e-09!63;CL:0000576!1.23e-09!63;CL:0000040!1.23e-09!63;CL:0000559!1.23e-09!63;CL:0002009!2.79e-09!65;CL:0000057!2.80e-09!75;CL:0000144!6.79e-09!625;CL:0000839!3.23e-08!70;CL:0000557!4.06e-07!71;CL:0000548!7.73e-07!679;CL:0000004!7.73e-07!679;CL:0000255!7.73e-07!679 | |ontology_enrichment_celltype=CL:0002371!9.63e-10!591;CL:0002194!1.23e-09!63;CL:0000576!1.23e-09!63;CL:0000040!1.23e-09!63;CL:0000559!1.23e-09!63;CL:0002009!2.79e-09!65;CL:0000057!2.80e-09!75;CL:0000144!6.79e-09!625;CL:0000839!3.23e-08!70;CL:0000557!4.06e-07!71;CL:0000548!7.73e-07!679;CL:0000004!7.73e-07!679;CL:0000255!7.73e-07!679 | ||
|ontology_enrichment_celltype_v019=CL:0000473;1.86e-08;39!CL:0000234;1.86e-08;39!CL:0000235;1.88e-08;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002194,2.76e-10,59;CL:0000576,2.76e-10,59;CL:0000040,2.76e-10,59;CL:0000559,2.76e-10,59;CL:0002009,1.28e-09,61;CL:0000839,2.32e-09,66;CL:0000235,2.11e-08,6;CL:0000048,3.45e-08,427;CL:0000723,4.48e-08,433;CL:0000557,6.70e-08,67;CL:0002320,6.81e-08,361;CL:0000473,9.45e-08,48;CL:0000234,9.45e-08,48;CL:0000134,1.38e-07,354;CL:0000034,2.38e-07,441;CL:0000219,8.85e-07,386 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000468!1.54e-10!659;UBERON:0003081!3.26e-10!216;UBERON:0000926!1.14e-08!448;UBERON:0004120!1.14e-08!448;UBERON:0006603!1.14e-08!448;UBERON:0004765!8.88e-08!101;UBERON:0001434!8.88e-08!101;UBERON:0002371!1.96e-07!80;UBERON:0002204!2.05e-07!167;UBERON:0000467!2.14e-07!625;UBERON:0002193!3.14e-07!112;UBERON:0000480!3.20e-07!626;UBERON:0002405!6.15e-07!115 | |ontology_enrichment_uberon=UBERON:0000468!1.54e-10!659;UBERON:0003081!3.26e-10!216;UBERON:0000926!1.14e-08!448;UBERON:0004120!1.14e-08!448;UBERON:0006603!1.14e-08!448;UBERON:0004765!8.88e-08!101;UBERON:0001434!8.88e-08!101;UBERON:0002371!1.96e-07!80;UBERON:0002204!2.05e-07!167;UBERON:0000467!2.14e-07!625;UBERON:0002193!3.14e-07!112;UBERON:0000480!3.20e-07!626;UBERON:0002405!6.15e-07!115 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000926,2.27e-12,315;UBERON:0004120,2.27e-12,315;UBERON:0006603,2.27e-12,315;UBERON:0003081,1.23e-10,203;UBERON:0001434,2.13e-08,100;UBERON:0002204,3.00e-08,167;UBERON:0002384,5.34e-08,371;UBERON:0002371,5.85e-08,76;UBERON:0004765,1.10e-07,90;UBERON:0001474,3.17e-07,82 | |||
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|phase1_expression=1.09007027562334,1.2846031433459,0.422863212287913,3.00219895059391,1.78784437770915,6.97870819280295,0,3.79031924056099,1.30592814099919,0,0,0.873765488520689,0.527533956456907,0.74259811776028,1.32558950291166,7.39557661096953,2.41077811209591,2.19093027116212,3.90346239032406,0.123121058076788,0.408001382488506,0.313454721478088,0.572471974262113,0.136874425072884,0,0,0,0,0,0,0,0,0.30120591877825,0.369754010166788,0,0,0,1.10799081706375,0,0.651032612147555,5.82180233023803,4.53451132426571,1.80302897343931,1.01778767145695,1.13362783106643,1.21292030593908,1.62700325833979,0.822335776043652,1.54853185447552,4.31538588483226,2.0492856522328,0.47296445977717,0.689491361473237,0.645484683583826,5.41705946377367,2.63539275359647,2.72906150057846,0.898893937780338,2.44867113896722,1.28371610830437,2.55734850319616,0.989553900560148,0.398927315243264,0,1.7412554317715,1.70215567407342,1.86846674698672,1.00499466102697,3.12889751052121,0.434377689410233,1.21079900526674,1.10483290796269,0.632924774881769,0.211255286311942,0.425208599930087,0.628975936525128,0.336985893439485,0.750884464207532,0,0.285012743741249,0,0.182664153764634,0,0.546138611262131,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0,0,0.167186495390678,0,0,0,0.222820913770347,0,0.221533894583621,0.270803863765016,0.25618263945135,0.130059347559878,0.328875809207352,0.829050053357545,0,0.14828656316206,0,0,0.226618685395132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.34140171940727,0.639312809217652,4.3372698286148,0,1.88300474649071,0,0,0.0945348171640679,0.443458794925128,0.175669571386252,0.654895377488563,0.728590576585084,1.11235332835329,5.51730569212962,4.35324343248168,11.3014266441035,0,0,0,0.596287222100115,0,1.38856200643038,0,2.09749718104953,2.75118041940067,0.208994966536811,0.516833518338658,1.06729878806013,0.33472061276467,4.83395180530976,2.28081631715554,1.95249646038536,1.47065232138347,3.24056779152704,0.17859945656816,0.44905874525234,0.337834441449967,0,0,1.09921046358244,0,0,0,2.98183171017191,0,1.05927344650575,2.58152958673932,0.709336764396714,2.80338800071154,1.06748995729705,3.45334567784024,0.311211035399766,0.67355336034844,0.817309515567294,0.151357427644931,1.15235184896,0.937285727335186,6.24320153660641,0.570471821544449,4.33401173600223,0.587172493218824,0.485618833104395,0.280901613404497,0.816616685019573,0.491337269247072,0.413303124703062,0,3.70900393917835,0.910161361938026,0.718618141816238,1.0100166837244,0.375355559615893,0,1.31693286264251,0.612975591598039,1.05166641234618,0.794025282120147,1.61450672119976,2.34913127700424,1.69545520927649,2.10063767259082,0.515262646192195,0.772921620136887,1.67505170698431,2.70042131586026,0.292311015483596,1.51460264546469,0.368199594569197,0.484938170456436,3.19508633264953,0.705264687593482,1.01736355386293,2.51239109112286,3.00020732649918,1.72082757233402,0,0,0.116193942869518,0.207322110030741,0,0,0,4.5026865673502,0,3.25057549622385,6.49691533502627,0.236613600079688,0.168584690078102,0,0.110293972732394,0.435758888184812,0,0.269662616320329,0.784885860501384,0.38474715694639,1.4763109092493,0,0.4115740113314,0,3.80265104465493,0.982827216677626,1.18157981336281,0,0.245976877086227,1.3725424823882,7.90202054942104,0,0.100528972411631,0.0925884451585296,0,4.15973914111831,0,0.695582429850461,0,1.29929802984966,0.462985512576611,0.570762456703795,0.790204397959275,1.71697232418975,11.8184162921951,6.08411089362018,12.4850176322532,0.93733833986777,1.34385702559088,0.567100388969546,0.53735113621709,0,0,0,0.352193736052904,0,0,0,1.20645999155121,1.52795370223311,1.17217447210047,3.4214489204541,2.67351481028641,0.600686115687835,0.571652865261156,0,0,0.36669142910475,2.71470603091333,0,6.762422020448,2.12750493267896,3.12022310734098,0.771622122786426,0,0.532844358032199,0.428933980974443,0.542621605391443,0.823240336780769,0.977208552881205,0,3.95975936466715,2.71295439353627,0,1.29964888536674,36.4871341923571,38.6737960402737,27.4084121327941,0.718874566474748,0,0,0.868687840005475,1.43833425785268,1.25342674267927,0.112085143993527,0.197030760201927,0,0,0,0,0,0.502548796003046,1.27587750330633,0,0,0,0.736148950314839,1.50051156317903,1.35632511849868,1.45579603071565,1.24900292158013,1.41932173530541,0.234282829985426,1.20378439891088,0,0,0,0.553107505625109,1.04260337361699,0,0.686286847621712,0.206768026122887,1.07857100409308,0.106727557803444,2.12189300012382,3.32870879020994,1.20956117331872,1.24053903909388,0.920771839728375,2.52594084989766,1.02511319404561,1.02341449813341,1.12597744800525,0,0.616838775210622,1.77561725313127,1.56041596426237,1.03850885836724,3.7187321107187,0.120859449591622,4.0101294060657,0.368323955743585,0.68888668898764,1.82091168006717,3.67148361886388,1.35359883872224,1.38627606787947,0,1.46139224653261,1.05551628892876,0,1.19065593693561,0,1.54227252690289,0.812839312631559,1.50506932156456,0.254876273045038,0,0,1.31555925987561,1.0457418040996,0.769350375349168,0.328014645699706,0,0.515205058238611,0,0.165018999841176,0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| ||
|short_description=p@chr8:11702366..11702398,+ | |short_description=p@chr8:11702366..11702398,+ | ||
}} | }} |
Latest revision as of 14:13, 31 July 2015
Short description: | p@chr8:11702366..11702398, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr8:11702366..11702398, + |
Coexpression cluster: | C632_Monocytederived_Macrophage_Dendritic_CD14_Keratinocyte_basal_tenocyte |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
monopoietic cell | 2.76e-10 | 59 |
monocyte | 2.76e-10 | 59 |
monoblast | 2.76e-10 | 59 |
promonocyte | 2.76e-10 | 59 |
macrophage dendritic cell progenitor | 1.28e-09 | 61 |
myeloid lineage restricted progenitor cell | 2.32e-09 | 66 |
macrophage | 2.11e-08 | 6 |
multi fate stem cell | 3.45e-08 | 427 |
somatic stem cell | 4.48e-08 | 433 |
granulocyte monocyte progenitor cell | 6.70e-08 | 67 |
connective tissue cell | 6.81e-08 | 361 |
defensive cell | 9.45e-08 | 48 |
phagocyte | 9.45e-08 | 48 |
mesenchymal cell | 1.38e-07 | 354 |
stem cell | 2.38e-07 | 441 |
motile cell | 8.85e-07 | 386 |
Ontology term | p-value | n |
---|---|---|
mesoderm | 2.27e-12 | 315 |
mesoderm-derived structure | 2.27e-12 | 315 |
presumptive mesoderm | 2.27e-12 | 315 |
lateral plate mesoderm | 1.23e-10 | 203 |
skeletal system | 2.13e-08 | 100 |
musculoskeletal system | 3.00e-08 | 167 |
connective tissue | 5.34e-08 | 371 |
bone marrow | 5.85e-08 | 76 |
skeletal element | 1.10e-07 | 90 |
bone element | 3.17e-07 | 82 |