FFCP PHASE1:Hg19::chr8:11313523..11313532,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr8:11313523..11313532,- | |||
|coexpression_cluster_id=C959 | |||
|description=CAGE_peak_at_chr8:11313523..11313532,- | |description=CAGE_peak_at_chr8:11313523..11313532,- | ||
|id=chr8:11313523..11313532,- | |id=chr8:11313523..11313532,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0007123;1.61e-27;5 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:3112;6.58e-10;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3112,6.88e-10,1 | |||
|ontology_enrichment_uberon=UBERON:0001049!2.68e-15!57;UBERON:0005068!2.68e-15!57;UBERON:0006241!2.68e-15!57;UBERON:0007135!2.68e-15!57;UBERON:0000073!2.60e-12!94;UBERON:0001016!2.60e-12!94;UBERON:0002780!1.77e-11!41;UBERON:0001890!1.77e-11!41;UBERON:0006240!1.77e-11!41;UBERON:0007023!2.10e-11!115;UBERON:0002616!2.56e-11!59;UBERON:0000955!3.63e-11!69;UBERON:0006238!3.63e-11!69;UBERON:0003080!5.18e-11!42;UBERON:0001017!1.63e-10!82;UBERON:0005743!4.56e-10!86;UBERON:0003075!8.82e-09!86;UBERON:0007284!8.82e-09!86;UBERON:0001893!1.51e-08!34;UBERON:0002346!2.10e-08!90;UBERON:0002791!6.60e-08!33;UBERON:0002619!1.45e-07!22;UBERON:0001869!1.65e-07!32;UBERON:0002020!2.09e-07!34;UBERON:0003528!2.09e-07!34;UBERON:0002046!6.05e-07!5;UBERON:0004117!6.05e-07!5;UBERON:0007689!6.05e-07!5;UBERON:0007123!6.05e-07!5;UBERON:0003091!6.05e-07!5 | |ontology_enrichment_uberon=UBERON:0001049!2.68e-15!57;UBERON:0005068!2.68e-15!57;UBERON:0006241!2.68e-15!57;UBERON:0007135!2.68e-15!57;UBERON:0000073!2.60e-12!94;UBERON:0001016!2.60e-12!94;UBERON:0002780!1.77e-11!41;UBERON:0001890!1.77e-11!41;UBERON:0006240!1.77e-11!41;UBERON:0007023!2.10e-11!115;UBERON:0002616!2.56e-11!59;UBERON:0000955!3.63e-11!69;UBERON:0006238!3.63e-11!69;UBERON:0003080!5.18e-11!42;UBERON:0001017!1.63e-10!82;UBERON:0005743!4.56e-10!86;UBERON:0003075!8.82e-09!86;UBERON:0007284!8.82e-09!86;UBERON:0001893!1.51e-08!34;UBERON:0002346!2.10e-08!90;UBERON:0002791!6.60e-08!33;UBERON:0002619!1.45e-07!22;UBERON:0001869!1.65e-07!32;UBERON:0002020!2.09e-07!34;UBERON:0003528!2.09e-07!34;UBERON:0002046!6.05e-07!5;UBERON:0004117!6.05e-07!5;UBERON:0007689!6.05e-07!5;UBERON:0007123!6.05e-07!5;UBERON:0003091!6.05e-07!5 | ||
|ontology_enrichment_uberon_v019=UBERON:0002046;1.61e-27;5!UBERON:0003296;1.18e-19;4!UBERON:0010133;1.18e-19;4!UBERON:0000007;9.97e-18;2!UBERON:0001894;1.77e-11;7!UBERON:0002368;3.66e-11;33!UBERON:0003112;1.48e-09;1!UBERON:0011158;1.48e-09;1!UBERON:0003128;1.48e-09;1!UBERON:0001703;1.48e-09;1!UBERON:0002241;1.48e-09;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002046,2.51e-27,5;UBERON:0004117,2.51e-27,5;UBERON:0007689,2.51e-27,5;UBERON:0007123,2.51e-27,5;UBERON:0003091,2.51e-27,5;UBERON:0003296,9.46e-20,4;UBERON:0010133,9.46e-20,4;UBERON:0000007,6.82e-18,2;UBERON:0009722,1.48e-12,11;UBERON:0007690,1.48e-12,11;UBERON:0001894,1.57e-11,7;UBERON:0006222,1.57e-11,7;UBERON:0002368,4.06e-11,35;UBERON:0003112,1.48e-09,1;UBERON:0011158,1.48e-09,1;UBERON:0003128,1.48e-09,1;UBERON:0001703,1.48e-09,1;UBERON:0002241,1.48e-09,1;UBERON:0004761,1.48e-09,1;UBERON:0009617,1.48e-09,1;UBERON:0000949,1.79e-08,45;UBERON:0008814,9.92e-08,18 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.382067028739756,0.410502947249729,0.236132343941038,0,0,0,0,0,0,1.93668001450754,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236482229888585,0,0,0,0.188242339542605,0,0,0,0.320929027076094,0,0,0,0,0,0.56738522469114,0,0,0.521482918420201,0,0,0.368277635987565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.1384259382189,1.17447437874188,0.382273228125229,0,0,0,0,0,0.616804496998528,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.403213486449465,0.267440195783507,0.289648807765598,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0,0,0,0.953962497221368,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12663051166458,0.132409180813219,0.286836620748814,0,0,0,0,0,0,0.163461903113459,0,0,0,0,0,0,0.117434498643765,0,0,0,0,0,0,0,0,0,0.336672227908132,0,0,0,0,0,0.113432183160021,2.69084453533293,0,0.211931901159562,0.600182192168805,0.103052529238439,1.54584324027377,0.37223371266318,0.506328996723799,0,0.757301322732344,0,0,0.355009592516614,0.201504196455281,0.169560592310488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.441463099414651,0,0,0,0,0.301586917234893,0,0,0,0,0,0,0,0,0.190254152234598,0,0,0,0,0,0,0.335964256397719,0,0.179117045405697,0,0,0.985326475791887,0.880484340132261,0,0,0,0.063497894292169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.197030760201927,0.431255149719035,0.128343036279748,0,0,0,0,0,0,0,0,0,0,0,0.207970861530807,0.178428988797162,0.157702415033935,0,0,0,0,0,0,0.260650843404249,0,0,0,0,0,0,0,0,0,0,0,0.256278298511402,0,0,0,0.154209693802656,0,0,0,0,0,0,0,0,0,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0.223874754722178,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0852266274161009,0,0,0,0.382838137483752,0,0,3.46293581513704,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.05650146756755,0.136499911407986,0,0,0,0,0,0,0,0,0,0,0.430234056612155,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.962479855263359,0,0.185803175125719,0,0.0711418433484141,0,0,0,0.211673582723883,0,0,0,0,0,0,0,0,0,0.343505344755765,0,0,0,0,0,0,0,0,0,0,0,0,0.334330152832435,0.284136146806413,0,0,0,0.994147647766298,0.562677665642051,1.11308705022906,1.15362711958732,0,0.398495976502139,0,1.76352923497993,0.409074730008619,0.123084805461069,0,0.269605053441981,0.537063524026827,0,0,0,0,0,0.278304294485554,0,0,0,0,0.227586896570999,0,0,0.344743373241465,0,0,2.65722415744152,0,0,0.552896299656123,0.295547618953547,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.632994193584081,0.163232808159148,0,0,0,0,0,0,0.123563938946503,0.208843899010911,0.471807930864739,0,0,0,0,0,0,0,0,0.189559738885464,0,0,0,0.330991955875499,0,0,0,0,0,0.195984794828755,0.34823682632161,0.17472666824203,0,0,0,0,0.0969890164884194,0.0882561266915003,0.225980740780532,0.137041924646751,0.19871461170299,0.316553979779393,0.195551382734803,0.0801588202515337,0,0,0,0,0.857974989309823,0,0.248505071130865,0,0,0,0,0,0,0,0,0,0.262887354279314,0,0,0,0,0,0,0,0.720599767084807,0,0,0,0,0.196854963029498,0,0.795229689809303,0.272406812223151,0,0,0,0.674921674654501,0,0.182248669974074,0,0.0788057072991982,0.104909176269996,0.211200673038813,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258565912723101,0,0,0,0,0.628817220398664,0.828478110694391,0.496166021811951,0,0,0,0,0,0,0,0,0.886068179966986,0.122026264901963,0.3755727921195,0.573409195690071,0.998361463831671,0.620964029413834,0.276697269872462,0,0.151649117541648,0,0,0,0.144921028610825,0.149254802886874,0,0,0.189403005275089,0,0,0,0.151230923763239,0,0.147855149989634,0.159296767163702,0,0.155262956876259,0,0,0,0,0.380805212168795,0,0,0.429642228169954,0,0,0,0,0,0,0,0,0,0.226705925512272,0,1.22368352253234,0.71635536432595,0.308801447160972,0,0.530067437837643,1.54331230616732,0,0.256241518587947,0,0,0.276516872303462,0,0.132864840313363,0,0,0.245772908753719,0,0.19998739585493,0,0,0,0,0,0,0.127894371303652,1.50954735955355,0.157265941855896,0.982886743728125,0,0,0.123935764259002,0,0,0,0,0,0,0.256916900385838,0,0.319267718114302,0,0,0.138314504928436,1.29180516505481,0,0.0981477185010256,0,0.366857197043358,0.231051332300676,0,0,0,0,0,0,0,2.12903492763126,0.739280431085226,0.472763092328763,1.56215619722769,0,0.317079050969534,0,0,0,0,0.127762427639595,0,3.02655349996942,1.82089681270989,2.04895972216168,0.0887023701626388,0,0,0.271878931907327,0.131545547125698,0.709163045303809,0,0,0.471346769748006,0,0,0.215927591218621,0,0.142953088353313,0.790068058663633,0,0,0,0,0,0,0,0.828324005113957,0.596493833314104,0.423387050190929,0,0.62041277132864,0.955538938977433,0.223710863595585,0.294450700845729,0,0,0,0,0,0,13.9265542612958,0.118920090777569,0,0.659643100472575,0,0.0771741581079447,0,0,0,0,0.196308467114945,1.18818560130834,0.4226557275834,0.169927114687817,0,0.128915775947154,0.799529247399431,0,0,0.160482733378337,0,0,0.143339583151451,0.315543124386369,0.135982980381829,0.436350690340377,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0.535928260312357,0.829169439458779,0.517164979309476,0,0.23806443146374,0.064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| ||
|short_description=p@chr8:11313523..11313532,- | |short_description=p@chr8:11313523..11313532,- | ||
}} | }} |
Latest revision as of 14:05, 31 July 2015
Short description: | p@chr8:11313523..11313532, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr8:11313523..11313532, - |
Coexpression cluster: | C959_small_thyroid_Smooth_Burkitt_Fibroblast_pineal_papillary |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
thyroid gland | 2.51e-27 | 5 |
pharyngeal pouch | 2.51e-27 | 5 |
thyroid diverticulum | 2.51e-27 | 5 |
pharyngeal pouch 2 | 2.51e-27 | 5 |
thyroid primordium | 2.51e-27 | 5 |
gland of diencephalon | 9.46e-20 | 4 |
neuroendocrine gland | 9.46e-20 | 4 |
pituitary gland | 6.82e-18 | 2 |
entire pharyngeal arch endoderm | 1.48e-12 | 11 |
early pharyngeal endoderm | 1.48e-12 | 11 |
diencephalon | 1.57e-11 | 7 |
future diencephalon | 1.57e-11 | 7 |
endocrine gland | 4.06e-11 | 35 |
olfactory region | 1.48e-09 | 1 |
primary subdivision of skull | 1.48e-09 | 1 |
cranium | 1.48e-09 | 1 |
neurocranium | 1.48e-09 | 1 |
chondrocranium | 1.48e-09 | 1 |
cartilaginous neurocranium | 1.48e-09 | 1 |
head paraxial mesoderm | 1.48e-09 | 1 |
endocrine system | 1.79e-08 | 45 |
pharyngeal arch system | 9.92e-08 | 18 |
Ontology term | p-value | n |
---|---|---|
papillary adenocarcinoma | 6.88e-10 | 1 |