FFCP PHASE1:Hg19::chr7:96651945..96651968,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr7:96651945..96651968,- | |||
|coexpression_cluster_id=C4709 | |||
|description=CAGE_peak_at_chr7:96651945..96651968,- | |||
|id=chr7:96651945..96651968,- | |||
|ontology_enrichment_celltype=CL:0000062!2.07e-21!11;CL:0000375!2.07e-21!11;CL:0000335!2.07e-21!11;CL:0000035!6.13e-14!20;CL:0002540!9.70e-10!6;CL:0002092!6.26e-09!10;CL:0000047!5.21e-08!8 | |||
|ontology_enrichment_celltype_v019=CL:0000062;3.37e-13;9!CL:0000540;3.35e-09;6!CL:0000404;3.35e-09;6!CL:0000047;1.40e-07;2!CL:0000054;1.99e-07;2!CL:0000137;1.99e-07;2!CL:0000092;1.99e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000062,1.52e-18,11;CL:0000375,1.52e-18,11;CL:0000335,1.52e-18,11;CL:0000047,1.22e-14,8;CL:0000540,3.02e-09,6;CL:0000031,3.02e-09,6;CL:0000404,3.02e-09,6;CL:0000054,1.64e-07,2;CL:0000137,1.64e-07,2;CL:0000092,1.64e-07,2 | |||
|ontology_enrichment_development_v019=CL:0000335;1.95e-18;11!CL:0000031;3.35e-09;6!UBERON:0010122;1.40e-07;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:200;1.99e-07;2!DOID:4305;1.99e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:200,1.64e-07,2;DOID:4305,1.64e-07,2 | |||
|ontology_enrichment_uberon=UBERON:0001869!3.28e-21!32;UBERON:0002780!6.71e-21!41;UBERON:0001890!6.71e-21!41;UBERON:0006240!6.71e-21!41;UBERON:0003080!2.57e-20!42;UBERON:0001893!8.59e-20!34;UBERON:0000073!5.10e-19!94;UBERON:0001016!5.10e-19!94;UBERON:0001017!5.62e-19!82;UBERON:0005743!7.68e-18!86;UBERON:0002791!8.26e-18!33;UBERON:0002020!3.31e-17!34;UBERON:0003528!3.31e-17!34;UBERON:0000369!1.12e-15!4;UBERON:0002435!1.12e-15!4;UBERON:0000204!1.12e-15!4;UBERON:0010082!1.12e-15!4;UBERON:0001049!5.38e-14!57;UBERON:0005068!5.38e-14!57;UBERON:0006241!5.38e-14!57;UBERON:0007135!5.38e-14!57;UBERON:0002619!1.17e-13!22;UBERON:0002616!2.15e-13!59;UBERON:0003056!7.83e-13!61;UBERON:0001950!2.49e-12!20;UBERON:0000955!3.67e-12!69;UBERON:0006238!3.67e-12!69;UBERON:0005383!3.86e-12!3;UBERON:0005382!3.86e-12!3;UBERON:0000956!7.42e-12!25;UBERON:0000203!7.42e-12!25;UBERON:0007023!1.33e-10!115;UBERON:0003075!2.52e-10!86;UBERON:0007284!2.52e-10!86;UBERON:0004121!1.01e-09!169;UBERON:0002346!1.11e-09!90;UBERON:0000924!2.35e-09!173;UBERON:0006601!2.35e-09!173;UBERON:0009663!5.72e-09!7;UBERON:0001873!8.49e-09!2;UBERON:0010122!8.49e-09!2;UBERON:0002360!9.54e-08!2;UBERON:0000094!9.54e-08!2;UBERON:0007645!9.54e-08!2;UBERON:0000153!5.60e-07!129;UBERON:0007811!5.60e-07!129;UBERON:0002308!5.69e-07!9;UBERON:0002420!5.69e-07!9;UBERON:0000125!5.69e-07!9;UBERON:0007245!5.69e-07!9;UBERON:0010009!5.69e-07!9;UBERON:0010011!5.69e-07!9;UBERON:0000454!5.69e-07!9;UBERON:0001872!6.69e-07!5 | |||
|ontology_enrichment_uberon_v019=UBERON:0001882;1.42e-13;1!UBERON:0005403;1.42e-13;1!UBERON:0000369;2.43e-13;4!UBERON:0002435;2.43e-13;4!UBERON:0000204;2.43e-13;4!UBERON:0009663;5.19e-08;7!UBERON:0001873;1.40e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001882,1.61e-13,1;UBERON:0005403,1.61e-13,1;UBERON:0000369,2.84e-13,4;UBERON:0002435,2.84e-13,4;UBERON:0000204,2.84e-13,4;UBERON:0010082,2.84e-13,4;UBERON:0009663,5.66e-08,7;UBERON:0001016,8.48e-08,89;UBERON:0001873,1.54e-07,2;UBERON:0010122,1.54e-07,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125118519871964,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.4115740113314,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.771622122786426,0,0.532844358032199,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.76228387266739,2.60279707715243,0,2.84777651068393,1.27587750330633,0,0,0,0,0,0,0,0,0,0,1.80567659836631,9.09630016223939,0,0.664225598535437,0.921845842708516,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.824125183365091,0.660075999364704,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.70038601945582,0,0,0,0,0,0,0,0,0,0,0,0,0,0.278304294485554,0,0,0,0,0,0,0,0,0,0,0.885741385813839,2.17073589525734,0,0,0,0.219385397153973,0,0,0,0,0.23056390438806,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.937057782901357,0,0,0,0,0,1.22429104652196,0.126373159256976,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.253243183823515,0,0,0,0,0,3.55063448114339,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0,0,0.303747783290123,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.28984205722165,0,0,0,0.189403005275089,0.251567901752575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.90078792938764,0.786329709279482,0,0,0,0,0,0,0,0,0,0,1.22035527683273,0,0,0,1.00828678488687,0.345786262321089,0,0,0,0,0,0,1.90691047733584,0,3.77940822020922,0,0,0,0,0,0,0.135075169236789,0,0,0.253663240775627,0.546974809018219,0,0.496211178389294,0,0,0,0,0,0,0.177404740325278,0,0,0,0.197318320688547,0,0,0,0.628462359664008,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.1294608203896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.407948941145488,2.18175345170189,0,0,0,0,0.378499274505237,0.109265571963696,0,0,0,0,0,0.757786982182394,0.267964130156178,0,0.517164979309476,0,0,0.0645889098360061,0.0620747142958579,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122241444182866,0,0,0,0 | |||
|short_description=p@chr7:96651945..96651968,- | |||
}} |
Latest revision as of 13:00, 31 July 2015
Short description: | p@chr7:96651945..96651968, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr7:96651945..96651968, - |
Coexpression cluster: | C4709_Osteoblast_anaplastic_neuroblastoma_gastric_osteosarcoma_small_temporal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
osteoblast | 1.52e-18 | 11 |
osteoprogenitor cell | 1.52e-18 | 11 |
mesenchyme condensation cell | 1.52e-18 | 11 |
neuronal stem cell | 1.22e-14 | 8 |
neuron | 3.02e-09 | 6 |
neuroblast | 3.02e-09 | 6 |
electrically signaling cell | 3.02e-09 | 6 |
bone matrix secreting cell | 1.64e-07 | 2 |
osteocyte | 1.64e-07 | 2 |
osteoclast | 1.64e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
nucleus accumbens | 1.61e-13 | 1 |
ventral striatum | 1.61e-13 | 1 |
corpus striatum | 2.84e-13 | 4 |
striatum | 2.84e-13 | 4 |
ventral part of telencephalon | 2.84e-13 | 4 |
future corpus striatum | 2.84e-13 | 4 |
telencephalic nucleus | 5.66e-08 | 7 |
nervous system | 8.48e-08 | 89 |
caudate nucleus | 1.54e-07 | 2 |
future caudate nucleus | 1.54e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
giant cell tumor | 1.64e-07 | 2 |
bone giant cell tumor | 1.64e-07 | 2 |