FFCP PHASE1:Hg19::chr7:93519576..93519598,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr7:93519576..93519598,+ | |||
|coexpression_cluster_id=C378 | |||
|description=CAGE_peak_at_chr7:93519576..93519598,+ | |description=CAGE_peak_at_chr7:93519576..93519598,+ | ||
|id=chr7:93519576..93519598,+ | |id=chr7:93519576..93519598,+ | ||
|ontology_enrichment_celltype=CL:0000187!1.63e-23!54;CL:0000359!2.35e-23!32;CL:0000680!5.21e-23!57;CL:0000056!5.21e-23!57;CL:0000355!5.21e-23!57;CL:0000192!1.39e-22!42;CL:0000514!1.39e-22!42;CL:0000183!5.98e-22!59;CL:0000393!5.14e-20!60;CL:0000211!5.14e-20!60;CL:0000222!4.39e-15!119;CL:0000055!1.46e-11!180;CL:0002595!4.66e-09!5;CL:0002494!8.39e-09!16;CL:0002594!9.48e-07!4 | |ontology_enrichment_celltype=CL:0000187!1.63e-23!54;CL:0000359!2.35e-23!32;CL:0000680!5.21e-23!57;CL:0000056!5.21e-23!57;CL:0000355!5.21e-23!57;CL:0000192!1.39e-22!42;CL:0000514!1.39e-22!42;CL:0000183!5.98e-22!59;CL:0000393!5.14e-20!60;CL:0000211!5.14e-20!60;CL:0000222!4.39e-15!119;CL:0000055!1.46e-11!180;CL:0002595!4.66e-09!5;CL:0002494!8.39e-09!16;CL:0002594!9.48e-07!4 | ||
|ontology_enrichment_celltype_v019=CL:0000359;2.43e-27;32!CL:0002595;2.53e-26;5!CL:0000192;1.88e-17;43!CL:0002593;8.60e-12;2!CL:0000187;2.77e-10;55!CL:0000393;5.47e-08;61!CL:0000211;5.47e-08;61!CL:0002494;7.85e-08;16 | |||
|ontology_enrichment_celltype_v019_2=CL:0000359,1.83e-28,32;CL:0002595,3.65e-26,5;CL:0000192,1.59e-23,43;CL:0000514,1.59e-23,43;CL:0000187,1.14e-17,55;CL:0000680,1.39e-16,58;CL:0000056,1.39e-16,58;CL:0000355,1.39e-16,58;CL:0000393,1.32e-15,61;CL:0000211,1.32e-15,61;CL:0002593,9.57e-12,2;CL:0002494,7.46e-08,16;CL:0000222,2.58e-07,121 | |||
|ontology_enrichment_development_v019=CL:0000514;1.88e-17;43!CL:0000355;9.25e-09;58!UBERON:0003124;8.34e-07;1 | |||
|ontology_enrichment_disease=DOID:2394!6.51e-11!14;DOID:0060072!9.21e-07!4 | |ontology_enrichment_disease=DOID:2394!6.51e-11!14;DOID:0060072!9.21e-07!4 | ||
|ontology_enrichment_disease_v019=DOID:0060084;1.07e-07;3!DOID:127;1.07e-07;3 | |||
|ontology_enrichment_disease_v019_2=DOID:0060084,9.55e-08,3;DOID:127,9.55e-08,3 | |||
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|ontology_enrichment_uberon_v019=UBERON:0003834;2.53e-26;5!UBERON:0001533;2.53e-26;5!UBERON:0003513;9.58e-19;7!UBERON:0001637;2.87e-15;42!UBERON:0003509;2.87e-15;42!UBERON:0004572;2.87e-15;42!UBERON:0004573;3.97e-15;33!UBERON:0004571;3.97e-15;33!UBERON:0002119;2.21e-12;4!UBERON:0002456;8.60e-12;2!UBERON:0007500;2.51e-08;56!UBERON:0001981;2.51e-08;56!UBERON:0004537;2.51e-08;56 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003834,3.65e-26,5;UBERON:0001533,3.65e-26,5;UBERON:0001637,5.89e-21,42;UBERON:0003509,5.89e-21,42;UBERON:0004572,5.89e-21,42;UBERON:0004872,3.92e-20,83;UBERON:0003513,1.24e-18,7;UBERON:0004573,5.50e-17,33;UBERON:0004571,5.50e-17,33;UBERON:0002329,6.49e-17,71;UBERON:0003059,6.49e-17,71;UBERON:0007282,6.49e-17,71;UBERON:0004290,6.49e-17,71;UBERON:0009618,6.49e-17,71;UBERON:0003077,1.26e-16,72;UBERON:0007285,1.26e-16,72;UBERON:0007524,2.40e-16,73;UBERON:0001134,2.66e-15,62;UBERON:0002036,2.66e-15,62;UBERON:0003082,2.66e-15,62;UBERON:0007503,4.67e-15,78;UBERON:0002385,1.01e-14,64;UBERON:0001015,1.01e-14,64;UBERON:0000383,1.01e-14,64;UBERON:0007500,4.82e-14,59;UBERON:0001981,4.82e-14,59;UBERON:0004537,4.82e-14,59;UBERON:0006965,4.82e-14,59;UBERON:0000486,6.36e-14,83;UBERON:0002119,1.73e-12,4;UBERON:0000055,8.65e-12,68;UBERON:0002456,9.57e-12,2;UBERON:0003914,1.78e-11,117;UBERON:0004535,3.70e-11,109;UBERON:0001009,9.38e-11,112;UBERON:0005256,9.50e-11,122;UBERON:0003104,2.14e-10,160;UBERON:0009142,2.14e-10,160;UBERON:0002049,6.70e-10,78;UBERON:0007798,6.70e-10,78;UBERON:0000490,3.14e-09,148;UBERON:0000926,6.04e-09,315;UBERON:0004120,6.04e-09,315;UBERON:0006603,6.04e-09,315;UBERON:0003081,3.26e-07,203;UBERON:0000948,3.74e-07,24;UBERON:0005498,3.74e-07,24;UBERON:0004140,3.74e-07,24;UBERON:0009881,3.74e-07,24;UBERON:0004141,3.74e-07,24;UBERON:0003084,3.74e-07,24;UBERON:0007005,3.74e-07,24;UBERON:0004139,3.74e-07,24;UBERON:0004291,3.74e-07,24 | |||
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| ||
|short_description=p@chr7:93519576..93519598,+ | |short_description=p@chr7:93519576..93519598,+ | ||
}} | }} |
Latest revision as of 12:37, 31 July 2015
Short description: | p@chr7:93519576..93519598, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr7:93519576..93519598, + |
Coexpression cluster: | C378_Smooth_mesenchymal_placenta_clear_leiomyoma_renal_Preadipocyte |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
vascular associated smooth muscle cell | 1.83e-28 | 32 |
smooth muscle cell of the subclavian artery | 3.65e-26 | 5 |
smooth muscle cell | 1.59e-23 | 43 |
smooth muscle myoblast | 1.59e-23 | 43 |
muscle cell | 1.14e-17 | 55 |
muscle precursor cell | 1.39e-16 | 58 |
myoblast | 1.39e-16 | 58 |
multi-potent skeletal muscle stem cell | 1.39e-16 | 58 |
electrically responsive cell | 1.32e-15 | 61 |
electrically active cell | 1.32e-15 | 61 |
smooth muscle cell of the internal thoracic artery | 9.57e-12 | 2 |
cardiocyte | 7.46e-08 | 16 |
mesodermal cell | 2.58e-07 | 121 |
Ontology term | p-value | n |
---|---|---|
cell type benign neoplasm | 9.55e-08 | 3 |
leiomyoma | 9.55e-08 | 3 |