FFCP PHASE1:Hg19::chr7:93518492..93518540,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr7:93518492..93518540,- | |||
|coexpression_cluster_id=C378 | |||
|description=CAGE_peak_at_chr7:93518492..93518540,- | |description=CAGE_peak_at_chr7:93518492..93518540,- | ||
|id=chr7:93518492..93518540,- | |id=chr7:93518492..93518540,- | ||
|ontology_enrichment_celltype=CL:0000680!2.47e-25!57;CL:0000056!2.47e-25!57;CL:0000355!2.47e-25!57;CL:0000187!1.36e-24!54;CL:0000192!1.85e-24!42;CL:0000514!1.85e-24!42;CL:0000183!2.76e-22!59;CL:0000359!5.16e-22!32;CL:0000393!6.56e-22!60;CL:0000211!6.56e-22!60;CL:0000222!1.22e-21!119;CL:0000055!1.06e-19!180;CL:0000057!7.74e-09!75;CL:0000220!4.92e-08!246;CL:0000548!5.09e-08!679;CL:0000004!5.09e-08!679;CL:0000255!5.09e-08!679;CL:0002494!5.18e-08!16;CL:0002321!8.29e-08!248;CL:0000012!9.02e-08!682;CL:0000144!9.63e-08!625;CL:0000048!1.51e-07!430;CL:0000723!2.14e-07!436;CL:0002595!2.44e-07!5;CL:0002371!8.09e-07!591;CL:0000034!9.72e-07!444 | |ontology_enrichment_celltype=CL:0000680!2.47e-25!57;CL:0000056!2.47e-25!57;CL:0000355!2.47e-25!57;CL:0000187!1.36e-24!54;CL:0000192!1.85e-24!42;CL:0000514!1.85e-24!42;CL:0000183!2.76e-22!59;CL:0000359!5.16e-22!32;CL:0000393!6.56e-22!60;CL:0000211!6.56e-22!60;CL:0000222!1.22e-21!119;CL:0000055!1.06e-19!180;CL:0000057!7.74e-09!75;CL:0000220!4.92e-08!246;CL:0000548!5.09e-08!679;CL:0000004!5.09e-08!679;CL:0000255!5.09e-08!679;CL:0002494!5.18e-08!16;CL:0002321!8.29e-08!248;CL:0000012!9.02e-08!682;CL:0000144!9.63e-08!625;CL:0000048!1.51e-07!430;CL:0000723!2.14e-07!436;CL:0002595!2.44e-07!5;CL:0002371!8.09e-07!591;CL:0000034!9.72e-07!444 | ||
|ontology_enrichment_celltype_v019=CL:0000359;1.25e-35;32!CL:0000192;3.53e-26;43!CL:0002595;2.71e-14;5!CL:0000187;1.04e-13;55!CL:0000393;7.94e-12;61!CL:0000211;7.94e-12;61!CL:0002594;6.56e-11;4!CL:0002494;2.51e-09;16!CL:0002539;1.70e-08;10!CL:0002593;5.39e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000359,1.45e-37,32;CL:0000192,4.36e-37,43;CL:0000514,4.36e-37,43;CL:0000680,1.23e-29,58;CL:0000056,1.23e-29,58;CL:0000355,1.23e-29,58;CL:0000187,1.64e-29,55;CL:0000393,8.12e-26,61;CL:0000211,8.12e-26,61;CL:0002595,2.52e-14,5;CL:0000222,3.45e-14,121;CL:0002594,5.64e-11,4;CL:0000048,6.16e-11,427;CL:0000723,1.44e-10,433;CL:0000034,4.28e-10,441;CL:0002494,2.83e-09,16;CL:0002539,1.40e-08,10;CL:0000057,8.41e-08,76;CL:0002593,5.32e-07,2 | |||
|ontology_enrichment_development_v019=CL:0000514;3.53e-26;43!CL:0000355;3.89e-13;58 | |||
|ontology_enrichment_disease=DOID:2394!2.87e-15!14;DOID:120!1.05e-08!27;DOID:193!9.76e-08!29 | |ontology_enrichment_disease=DOID:2394!2.87e-15!14;DOID:120!1.05e-08!27;DOID:193!9.76e-08!29 | ||
|ontology_enrichment_disease_v019=DOID:2394;4.66e-24;14!DOID:120;2.61e-13;27!DOID:193;3.57e-12;29!DOID:0060072;1.35e-11;4!DOID:0060084;2.70e-09;3!DOID:127;2.70e-09;3 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,6.25e-24,14;DOID:120,3.10e-13,27;DOID:193,4.18e-12,29;DOID:0060072,1.41e-11,4;DOID:0060084,2.75e-09,3;DOID:127,2.75e-09,3 | |||
|ontology_enrichment_uberon=UBERON:0004872!1.29e-27!84;UBERON:0002049!1.96e-25!79;UBERON:0007798!1.96e-25!79;UBERON:0001637!4.93e-25!42;UBERON:0003509!4.93e-25!42;UBERON:0004572!4.93e-25!42;UBERON:0001981!2.95e-24!60;UBERON:0007500!2.95e-24!60;UBERON:0004537!2.95e-24!60;UBERON:0006965!2.95e-24!60;UBERON:0000055!8.73e-24!69;UBERON:0001134!1.23e-22!61;UBERON:0002036!1.23e-22!61;UBERON:0003082!1.23e-22!61;UBERON:0004535!1.48e-22!110;UBERON:0004290!1.54e-21!70;UBERON:0002385!2.01e-21!63;UBERON:0001015!2.01e-21!63;UBERON:0000383!2.01e-21!63;UBERON:0001009!2.17e-21!113;UBERON:0000914!1.62e-19!83;UBERON:0002329!1.62e-19!83;UBERON:0003077!1.62e-19!83;UBERON:0003059!1.62e-19!83;UBERON:0007282!1.62e-19!83;UBERON:0009618!1.62e-19!83;UBERON:0007285!1.62e-19!83;UBERON:0000490!2.94e-19!138;UBERON:0003914!3.53e-19!118;UBERON:0004573!9.38e-19!33;UBERON:0004571!9.38e-19!33;UBERON:0000486!1.13e-18!82;UBERON:0005256!6.98e-15!143;UBERON:0000119!9.89e-11!312;UBERON:0000483!2.16e-10!309;UBERON:0000992!1.47e-09!13;UBERON:0000947!4.01e-09!21;UBERON:0010191!4.01e-09!21;UBERON:0002100!4.07e-09!216;UBERON:0000477!1.22e-08!286;UBERON:0000948!4.40e-08!24;UBERON:0005498!4.40e-08!24;UBERON:0004140!4.40e-08!24;UBERON:0009881!4.40e-08!24;UBERON:0004141!4.40e-08!24;UBERON:0003084!4.40e-08!24;UBERON:0007005!4.40e-08!24;UBERON:0004139!4.40e-08!24;UBERON:0004291!4.40e-08!24;UBERON:0003513!5.61e-08!8;UBERON:0004111!7.89e-08!241;UBERON:0003834!2.44e-07!5;UBERON:0001533!2.44e-07!5;UBERON:0001135!3.53e-07!15;UBERON:0003104!4.16e-07!238;UBERON:0009142!4.16e-07!238 | |ontology_enrichment_uberon=UBERON:0004872!1.29e-27!84;UBERON:0002049!1.96e-25!79;UBERON:0007798!1.96e-25!79;UBERON:0001637!4.93e-25!42;UBERON:0003509!4.93e-25!42;UBERON:0004572!4.93e-25!42;UBERON:0001981!2.95e-24!60;UBERON:0007500!2.95e-24!60;UBERON:0004537!2.95e-24!60;UBERON:0006965!2.95e-24!60;UBERON:0000055!8.73e-24!69;UBERON:0001134!1.23e-22!61;UBERON:0002036!1.23e-22!61;UBERON:0003082!1.23e-22!61;UBERON:0004535!1.48e-22!110;UBERON:0004290!1.54e-21!70;UBERON:0002385!2.01e-21!63;UBERON:0001015!2.01e-21!63;UBERON:0000383!2.01e-21!63;UBERON:0001009!2.17e-21!113;UBERON:0000914!1.62e-19!83;UBERON:0002329!1.62e-19!83;UBERON:0003077!1.62e-19!83;UBERON:0003059!1.62e-19!83;UBERON:0007282!1.62e-19!83;UBERON:0009618!1.62e-19!83;UBERON:0007285!1.62e-19!83;UBERON:0000490!2.94e-19!138;UBERON:0003914!3.53e-19!118;UBERON:0004573!9.38e-19!33;UBERON:0004571!9.38e-19!33;UBERON:0000486!1.13e-18!82;UBERON:0005256!6.98e-15!143;UBERON:0000119!9.89e-11!312;UBERON:0000483!2.16e-10!309;UBERON:0000992!1.47e-09!13;UBERON:0000947!4.01e-09!21;UBERON:0010191!4.01e-09!21;UBERON:0002100!4.07e-09!216;UBERON:0000477!1.22e-08!286;UBERON:0000948!4.40e-08!24;UBERON:0005498!4.40e-08!24;UBERON:0004140!4.40e-08!24;UBERON:0009881!4.40e-08!24;UBERON:0004141!4.40e-08!24;UBERON:0003084!4.40e-08!24;UBERON:0007005!4.40e-08!24;UBERON:0004139!4.40e-08!24;UBERON:0004291!4.40e-08!24;UBERON:0003513!5.61e-08!8;UBERON:0004111!7.89e-08!241;UBERON:0003834!2.44e-07!5;UBERON:0001533!2.44e-07!5;UBERON:0001135!3.53e-07!15;UBERON:0003104!4.16e-07!238;UBERON:0009142!4.16e-07!238 | ||
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| ||
|short_description=p@chr7:93518492..93518540,- | |short_description=p@chr7:93518492..93518540,- | ||
}} | }} |
Latest revision as of 12:37, 31 July 2015
Short description: | p@chr7:93518492..93518540, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr7:93518492..93518540, - |
Coexpression cluster: | C378_Smooth_mesenchymal_placenta_clear_leiomyoma_renal_Preadipocyte |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
vascular associated smooth muscle cell | 1.45e-37 | 32 |
smooth muscle cell | 4.36e-37 | 43 |
smooth muscle myoblast | 4.36e-37 | 43 |
muscle precursor cell | 1.23e-29 | 58 |
myoblast | 1.23e-29 | 58 |
multi-potent skeletal muscle stem cell | 1.23e-29 | 58 |
muscle cell | 1.64e-29 | 55 |
electrically responsive cell | 8.12e-26 | 61 |
electrically active cell | 8.12e-26 | 61 |
smooth muscle cell of the subclavian artery | 2.52e-14 | 5 |
mesodermal cell | 3.45e-14 | 121 |
smooth muscle cell of the umbilical artery | 5.64e-11 | 4 |
multi fate stem cell | 6.16e-11 | 427 |
somatic stem cell | 1.44e-10 | 433 |
stem cell | 4.28e-10 | 441 |
cardiocyte | 2.83e-09 | 16 |
aortic smooth muscle cell | 1.40e-08 | 10 |
fibroblast | 8.41e-08 | 76 |
smooth muscle cell of the internal thoracic artery | 5.32e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 6.25e-24 | 14 |
female reproductive organ cancer | 3.10e-13 | 27 |
reproductive organ cancer | 4.18e-12 | 29 |