FFCP PHASE1:Hg19::chr7:93518374..93518429,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr7:93518374..93518429,- | |||
|coexpression_cluster_id=C378 | |||
|description=CAGE_peak_at_chr7:93518374..93518429,- | |||
|id=chr7:93518374..93518429,- | |||
|ontology_enrichment_celltype=CL:0000680!6.52e-25!57;CL:0000056!6.52e-25!57;CL:0000355!6.52e-25!57;CL:0000192!5.22e-24!42;CL:0000514!5.22e-24!42;CL:0000359!5.57e-24!32;CL:0000393!2.27e-23!60;CL:0000211!2.27e-23!60;CL:0000187!2.38e-23!54;CL:0000183!8.15e-22!59;CL:0000055!7.43e-21!180;CL:0000222!1.13e-20!119;CL:0000220!4.25e-11!246;CL:0002321!8.84e-11!248;CL:0002494!2.76e-10!16;CL:0002539!7.07e-10!10;CL:0000548!4.96e-08!679;CL:0000004!4.96e-08!679;CL:0000255!4.96e-08!679;CL:0002371!9.60e-08!591;CL:0000012!9.83e-08!682;CL:0000144!1.43e-07!625 | |||
|ontology_enrichment_celltype_v019=CL:0000359;2.97e-40;32!CL:0000192;7.23e-29;43!CL:0002539;1.46e-17;10!CL:0000187;1.49e-16;55!CL:0002494;4.21e-15;16!CL:0000393;1.47e-13;61!CL:0000211;1.47e-13;61!CL:0002595;2.77e-11;5!CL:0002594;6.11e-08;4!CL:0002592;6.55e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000359,9.47e-42,32;CL:0000192,9.83e-39,43;CL:0000514,9.83e-39,43;CL:0000187,4.27e-32,55;CL:0000680,9.67e-32,58;CL:0000056,9.67e-32,58;CL:0000355,9.67e-32,58;CL:0000393,7.21e-28,61;CL:0000211,7.21e-28,61;CL:0002539,1.21e-17,10;CL:0002494,5.15e-15,16;CL:0000222,3.86e-13,121;CL:0002595,2.59e-11,5;CL:0000723,1.77e-10,433;CL:0000048,2.06e-10,427;CL:0000034,6.49e-10,441;CL:0002594,4.65e-08,4;CL:0002592,6.64e-07,3 | |||
|ontology_enrichment_development_v019=CL:0000514;7.23e-29;43!CL:0000355;9.58e-16;58 | |||
|ontology_enrichment_disease=DOID:2394!1.89e-13!14;DOID:120!4.02e-09!27;DOID:193!4.91e-08!29 | |||
|ontology_enrichment_disease_v019=DOID:2394;2.99e-24;14!DOID:120;2.43e-14;27!DOID:193;4.80e-13;29!DOID:0060072;6.05e-09;4!DOID:0060084;2.39e-07;3!DOID:127;2.39e-07;3 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,1.44e-24,14;DOID:120,1.60e-14,27;DOID:193,3.27e-13,29;DOID:0060072,5.19e-09,4;DOID:0060084,2.40e-07,3;DOID:127,2.40e-07,3 | |||
|ontology_enrichment_uberon=UBERON:0004872!2.56e-28!84;UBERON:0001981!2.16e-25!60;UBERON:0007500!2.16e-25!60;UBERON:0004537!2.16e-25!60;UBERON:0006965!2.16e-25!60;UBERON:0000055!6.57e-25!69;UBERON:0002049!2.82e-24!79;UBERON:0007798!2.82e-24!79;UBERON:0001637!3.31e-24!42;UBERON:0003509!3.31e-24!42;UBERON:0004572!3.31e-24!42;UBERON:0004290!1.45e-23!70;UBERON:0001134!3.13e-23!61;UBERON:0002036!3.13e-23!61;UBERON:0003082!3.13e-23!61;UBERON:0002385!6.74e-22!63;UBERON:0001015!6.74e-22!63;UBERON:0000383!6.74e-22!63;UBERON:0000486!1.03e-21!82;UBERON:0003914!1.17e-21!118;UBERON:0004535!1.70e-21!110;UBERON:0000914!2.00e-21!83;UBERON:0002329!2.00e-21!83;UBERON:0003077!2.00e-21!83;UBERON:0003059!2.00e-21!83;UBERON:0007282!2.00e-21!83;UBERON:0009618!2.00e-21!83;UBERON:0007285!2.00e-21!83;UBERON:0004573!4.62e-21!33;UBERON:0004571!4.62e-21!33;UBERON:0001009!2.89e-20!113;UBERON:0000490!5.38e-19!138;UBERON:0005256!3.96e-17!143;UBERON:0000483!3.12e-14!309;UBERON:0000119!4.42e-14!312;UBERON:0002100!7.84e-14!216;UBERON:0000947!1.05e-10!21;UBERON:0010191!1.05e-10!21;UBERON:0000948!1.45e-10!24;UBERON:0005498!1.45e-10!24;UBERON:0004140!1.45e-10!24;UBERON:0009881!1.45e-10!24;UBERON:0004141!1.45e-10!24;UBERON:0003084!1.45e-10!24;UBERON:0007005!1.45e-10!24;UBERON:0004139!1.45e-10!24;UBERON:0004291!1.45e-10!24;UBERON:0004237!7.07e-10!10;UBERON:0004695!7.07e-10!10;UBERON:0002111!7.07e-10!10;UBERON:0004178!7.07e-10!10;UBERON:0004111!7.57e-10!241;UBERON:0000025!1.49e-09!194;UBERON:0000477!1.53e-09!286;UBERON:0003104!1.96e-09!238;UBERON:0009142!1.96e-09!238;UBERON:0007100!1.21e-08!27;UBERON:0001135!2.37e-08!15;UBERON:0000926!2.72e-08!448;UBERON:0004120!2.72e-08!448;UBERON:0006603!2.72e-08!448;UBERON:0000992!2.86e-08!13;UBERON:0000481!1.27e-07!347;UBERON:0000467!5.35e-07!625;UBERON:0003513!6.57e-07!8;UBERON:0000480!6.60e-07!626 | |||
|ontology_enrichment_uberon_v019=UBERON:0004573;5.27e-25;33!UBERON:0004571;5.27e-25;33!UBERON:0001637;1.12e-22;42!UBERON:0003509;1.12e-22;42!UBERON:0004572;1.12e-22;42!UBERON:0004237;1.46e-17;10!UBERON:0004695;1.46e-17;10!UBERON:0002111;1.46e-17;10!UBERON:0004178;1.46e-17;10!UBERON:0001135;5.73e-16;15!UBERON:0000992;7.66e-14;13!UBERON:0007500;1.95e-12;56!UBERON:0001981;1.95e-12;56!UBERON:0004537;1.95e-12;56!UBERON:0000947;5.71e-12;21!UBERON:0010191;5.71e-12;21!UBERON:0003834;2.77e-11;5!UBERON:0001533;2.77e-11;5!UBERON:0003513;9.98e-11;7!UBERON:0002118;2.27e-10;5!UBERON:0000948;3.90e-10;22!UBERON:0000991;2.65e-09;21!UBERON:0002119;6.88e-09;4!UBERON:0003134;9.18e-09;33!UBERON:0000055;1.40e-08;65!UBERON:0007100;1.45e-08;25!UBERON:0001310;6.11e-08;4!UBERON:0000474;8.95e-08;37!UBERON:0003914;9.36e-08;74!UBERON:0003100;1.22e-07;41!UBERON:0002049;3.49e-07;75!UBERON:0007798;3.49e-07;75!UBERON:0002385;5.08e-07;31!UBERON:0001015;5.08e-07;31!UBERON:0000383;5.08e-07;31!UBERON:0003498;6.55e-07;3!UBERON:0005985;6.55e-07;3!UBERON:0001621;6.55e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001637,6.07e-34,42;UBERON:0003509,6.07e-34,42;UBERON:0004572,6.07e-34,42;UBERON:0004872,1.49e-29,83;UBERON:0001134,5.67e-29,62;UBERON:0002036,5.67e-29,62;UBERON:0003082,5.67e-29,62;UBERON:0002329,5.94e-29,71;UBERON:0003059,5.94e-29,71;UBERON:0007282,5.94e-29,71;UBERON:0004290,5.94e-29,71;UBERON:0009618,5.94e-29,71;UBERON:0003077,2.19e-28,72;UBERON:0007285,2.19e-28,72;UBERON:0004573,2.96e-28,33;UBERON:0004571,2.96e-28,33;UBERON:0007524,7.81e-28,73;UBERON:0002385,1.01e-27,64;UBERON:0001015,1.01e-27,64;UBERON:0000383,1.01e-27,64;UBERON:0007503,9.65e-27,78;UBERON:0007500,4.00e-23,59;UBERON:0001981,4.00e-23,59;UBERON:0004537,4.00e-23,59;UBERON:0006965,4.00e-23,59;UBERON:0000486,4.57e-23,83;UBERON:0004535,2.87e-19,109;UBERON:0000055,8.25e-19,68;UBERON:0001009,2.00e-18,112;UBERON:0003914,4.18e-18,117;UBERON:0005256,6.61e-18,122;UBERON:0002049,1.11e-17,78;UBERON:0007798,1.11e-17,78;UBERON:0004237,1.21e-17,10;UBERON:0004695,1.21e-17,10;UBERON:0002111,1.21e-17,10;UBERON:0004178,1.21e-17,10;UBERON:0001135,4.37e-16,15;UBERON:0000490,4.80e-16,148;UBERON:0000926,9.58e-16,315;UBERON:0004120,9.58e-16,315;UBERON:0006603,9.58e-16,315;UBERON:0003104,8.15e-15,160;UBERON:0009142,8.15e-15,160;UBERON:0000992,5.18e-14,13;UBERON:0000948,1.92e-12,24;UBERON:0005498,1.92e-12,24;UBERON:0004140,1.92e-12,24;UBERON:0009881,1.92e-12,24;UBERON:0004141,1.92e-12,24;UBERON:0003084,1.92e-12,24;UBERON:0007005,1.92e-12,24;UBERON:0004139,1.92e-12,24;UBERON:0004291,1.92e-12,24;UBERON:0000947,5.93e-12,21;UBERON:0010191,5.93e-12,21;UBERON:0003834,2.59e-11,5;UBERON:0001533,2.59e-11,5;UBERON:0003513,7.81e-11,7;UBERON:0007100,1.19e-10,27;UBERON:0002118,1.88e-10,5;UBERON:0003134,6.01e-10,37;UBERON:0000474,6.01e-10,37;UBERON:0002100,6.02e-10,199;UBERON:0003498,6.49e-10,5;UBERON:0005985,6.49e-10,5;UBERON:0003100,1.08e-09,41;UBERON:0000991,2.19e-09,21;UBERON:0009196,2.19e-09,21;UBERON:0009117,2.19e-09,21;UBERON:0005564,2.19e-09,21;UBERON:0002119,6.20e-09,4;UBERON:0004176,7.76e-09,22;UBERON:0003081,2.29e-08,203;UBERON:0001310,4.65e-08,4;UBERON:0003133,1.01e-07,48;UBERON:0000025,1.15e-07,192;UBERON:0005156,3.38e-07,59;UBERON:0000990,3.38e-07,59;UBERON:0000483,4.37e-07,306;UBERON:0001621,6.64e-07,3;UBERON:0000119,6.94e-07,309 | |||
|phase1_expression=0,0.428201047781966,0.422863212287913,1.0007329835313,0,2.61701557230111,0,1.89515962028049,0,0.982935746006035,0.697801167972428,0,0.263766978228454,0.618831764800233,2.65117900582333,5.3786011716142,1.80808358407193,5.11217063271161,3.41552959153355,0,0.204000691244253,0,0,0.136874425072884,0,0,0,0,0,0,0,0,0.90361775633475,1.10926203050036,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,3.35350429851818,0,0.361439152384566,0,0.289693037921647,0.795285947051099,1.45990461090791,0,0,0.175669571386252,0,0,0.741568885568859,0,0,0,0,0,0,0,0.860234595106124,0.347140501607594,1.13061588384802,0,0,0.208994966536811,0.775250277507987,0,0,0.402829317109147,0.760272105718513,0.24406205754817,0.735326160691737,0,0.0892997282840798,0,0.225222960966644,0,0,0.183201743930407,0,0,0,0,0.25326102332916,0.264818361626438,2.58152958673932,1.06400514659507,0.560677600142307,1.06748995729705,0.74000264525148,1.24484414159907,3.3677668017422,5.88462851208451,0.454072282934794,0,0,3.43376084513353,1.1409436430889,3.58676833324323,0.23486899728753,0,0,0.204154171254893,0,0,1.18800285728205,1.48360157567134,0.910161361938026,0,0.168336113954066,0,0,0,0,4.20666564938471,2.38207584636044,0,0,0,2.10063767259082,0,0,0,0.506328996723799,0.194874010322397,0.252433774244115,0,0,0.355009592516614,0.10075209822764,0.339121184620975,0.386521706326594,0,0.286804595389004,0,0,0,0.10366105501537,0,0,0,0.643240938192885,0,0,0,0,0,0,0,0,0,0,0,0,2.95262181849859,0,0.8231480226628,0,0,0,0,0,0,0.343135620597051,0,1.1240175325762,0.402115889646523,0.0925884451585296,0,0,0,0,0.117408694235822,0.144366447761074,0.925971025153221,0.380508304469197,0,0,0,0,0,0,0,0.141775097242386,0.626909658919938,1.45316969256981,0,0,0,0,0,0,0,0,1.17217447210047,0,0,0,0,0,0,0.07333828582095,2.19761916788222,0,4.22651376278,1.06375246633948,0,0.257207374262142,0,0,1.14382394926518,0,0,0.977208552881205,0,3.16780749173372,0,0,0.299918973546171,0,0,0,0,0,0,1.44781306667579,0.410952645100767,0.537182889719687,0,0,0,0,0,0,0.773288812777695,0.167516265334349,0.637938751653163,0,0,0,0,0,0.271265023699736,0,0.178428988797162,0,0,0,0,0,0,0.368738337083406,0,0.195801157462741,0,0,0,0,0,0,0,0,0,0,0.128139149255701,0.511707249066704,0.482561763430822,0,1.23367755042124,1.77561725313127,0.492762936082855,7.2695620085707,0.929683027679674,0,0.802025881213139,0.0920809889358963,0.114814448164607,2.00300284807389,0.786746489756545,0,0.308061348417659,0,0,0.527758144464379,0,0,1.0795795805107,0,0.270946437543853,0,0.254876273045038,0,0.447749509444357,0,0,0,0.328014645699706,0.325378394664303,2.88514832613622,0,0,0,0,3.21367859688319,0.096670718292122,0.616194468458578,0,0.964856007391714,0,0.145016693914229,0.93749290157711,0,0.330569830721956,0.384380134730212,1.02090169995667,0.2023155617111,2.32422774648643,2.51849877464512,5.5762981612848,4.00443654228915,3.72614221221915,3.47973196830029,12.0460742417548,3.14874750832381,0,2.21465597303108,2.47819252100972,0,0,0.636406495851874,12.5591782431877,0,3.56898138656871,3.76999687506197,3.23491970517306,4.75530963519025,21.905439724427,0,31.682753652067,30.6385425594591,0.409499734223957,5.65621727814851,3.39024349860728,4.41092274836899,13.2687795048244,27.1839548857333,0.578775534266688,0,2.84074527747786,3.40805847909725,6.76069446077379,0.143411352204052,0,2.85336841185,2.12856638442359,0.633322905892992,0.329294892959902,0,0,0.192444225451024,0,0,4.0481834334015,0.86101074534246,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0.485442086998054,0,0,0.23874448473769,0,0,0,0,4.00711338082461,0,0,0,0,0,0,0,0.311039587661807,0.0898683511473268,0.179021174675609,0,0,0,0,0,0,0,0,0,0.724999575434793,0.1137934482855,0,0.709163045303809,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.31900115973192,0,0,0,0,0,0,0,0,0,0,0.421996129056054,19.7511697872569,0,0,0,0,0,0,0,0,0,0,0,0,0.19566461893209,0,0,0,0.30607276163049,0,0,0,0,1.65495977937749,0.941798755221676,0,0,0,1.38847790668105,0,0,0,0,0,0,0,0,0,0.225980740780532,0,3.97429223405979,0,0,0.240476460754601,0.213452994739353,0,0,0,0,0.432164393964449,0,0,0,0,0,0,0,0,0,0,0,0.837847203816763,0.229160424011684,0.717873024576814,0,0,0,0,3.96329871896644,0,0,0,0,0,0,0,0,0,0.137539436597234,0,0,0,0,0,0,0,0,5.55790751931819,0,0,0,0,7.60199442455198,9.50643640321395,24.4940520082057,0,0,0,0,0.146552233678082,0,0,0,0.171086837884329,0,0,0.157204305099666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.04478362020812,0.233713309847224,2.21922344601045,0.189403005275089,0,0.889811221596536,4.11912123114462,0,7.61642282855624,24.2482445983,19.1156120596443,2.69881867298163,9.9368292400806,29.8588469645416,8.77277658041383,1.5652351854352,1.05180326298053,1.90402606084398,11.3923805297305,4.36436782086143,8.3780234493141,6.96050639817741,2.78667122089031,0,0,0.673498977531838,0,0.385239660814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| |||
|short_description=p@chr7:93518374..93518429,- | |||
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Latest revision as of 12:36, 31 July 2015
Short description: | p@chr7:93518374..93518429, - |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr7:93518374..93518429, - |
Coexpression cluster: | C378_Smooth_mesenchymal_placenta_clear_leiomyoma_renal_Preadipocyte |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
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vascular associated smooth muscle cell | 9.47e-42 | 32 |
smooth muscle cell | 9.83e-39 | 43 |
smooth muscle myoblast | 9.83e-39 | 43 |
muscle cell | 4.27e-32 | 55 |
muscle precursor cell | 9.67e-32 | 58 |
myoblast | 9.67e-32 | 58 |
multi-potent skeletal muscle stem cell | 9.67e-32 | 58 |
electrically responsive cell | 7.21e-28 | 61 |
electrically active cell | 7.21e-28 | 61 |
aortic smooth muscle cell | 1.21e-17 | 10 |
cardiocyte | 5.15e-15 | 16 |
mesodermal cell | 3.86e-13 | 121 |
smooth muscle cell of the subclavian artery | 2.59e-11 | 5 |
somatic stem cell | 1.77e-10 | 433 |
multi fate stem cell | 2.06e-10 | 427 |
stem cell | 6.49e-10 | 441 |
smooth muscle cell of the umbilical artery | 4.65e-08 | 4 |
smooth muscle cell of the coronary artery | 6.64e-07 | 3 |
Ontology term | p-value | n |
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