FFCP PHASE1:Hg19::chr7:93516635..93516656,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr7:93516635..93516656,- | |||
|coexpression_cluster_id=C378 | |coexpression_cluster_id=C378 | ||
|description=CAGE_peak_at_chr7:93516635..93516656,- | |description=CAGE_peak_at_chr7:93516635..93516656,- | ||
|id=chr7:93516635..93516656,- | |id=chr7:93516635..93516656,- | ||
|ontology_enrichment_celltype=CL:0000359!1.52e-24!32;CL:0000192!1.68e-21!42;CL:0000514!1.68e-21!42;CL:0000187!1.34e-19!54;CL:0000680!2.83e-19!57;CL:0000056!2.83e-19!57;CL:0000355!2.83e-19!57;CL:0000183!3.59e-18!59;CL:0000393!1.44e-16!60;CL:0000211!1.44e-16!60;CL:0000055!2.52e-12!180;CL:0000222!8.13e-12!119;CL:0002539!3.32e-09!10;CL:0002494!4.25e-09!16;CL:0002595!8.29e-09!5 | |ontology_enrichment_celltype=CL:0000359!1.52e-24!32;CL:0000192!1.68e-21!42;CL:0000514!1.68e-21!42;CL:0000187!1.34e-19!54;CL:0000680!2.83e-19!57;CL:0000056!2.83e-19!57;CL:0000355!2.83e-19!57;CL:0000183!3.59e-18!59;CL:0000393!1.44e-16!60;CL:0000211!1.44e-16!60;CL:0000055!2.52e-12!180;CL:0000222!8.13e-12!119;CL:0002539!3.32e-09!10;CL:0002494!4.25e-09!16;CL:0002595!8.29e-09!5 | ||
|ontology_enrichment_celltype_v019=CL:0000359;4.86e-44;32!CL:0000192;1.06e-27;43!CL:0002595;8.80e-20;5!CL:0002539;5.15e-17;10!CL:0000187;6.42e-15;55!CL:0002592;4.03e-12;3!CL:0000393;4.07e-12;61!CL:0000211;4.07e-12;61!CL:0002593;3.30e-09;2!CL:0002594;1.63e-08;4!CL:0002589;1.93e-08;2!CL:0002494;4.02e-08;16 | |||
|ontology_enrichment_celltype_v019_2=CL:0000359,1.14e-46,32;CL:0000192,3.09e-40,43;CL:0000514,3.09e-40,43;CL:0000187,3.71e-30,55;CL:0000680,2.72e-28,58;CL:0000056,2.72e-28,58;CL:0000355,2.72e-28,58;CL:0000393,1.31e-26,61;CL:0000211,1.31e-26,61;CL:0002595,6.91e-20,5;CL:0002539,1.92e-17,10;CL:0000222,5.94e-13,121;CL:0002592,5.89e-12,3;CL:0002593,3.44e-09,2;CL:0002594,1.70e-08,4;CL:0002589,1.73e-08,2;CL:0002494,4.65e-08,16 | |||
|ontology_enrichment_development_v019=CL:0000514;1.06e-27;43!CL:0000355;5.32e-13;58 | |||
|ontology_enrichment_disease=DOID:2394!1.98e-16!14;DOID:120!1.26e-14!27;DOID:193!3.32e-13!29;DOID:0060072!4.39e-07!4 | |ontology_enrichment_disease=DOID:2394!1.98e-16!14;DOID:120!1.26e-14!27;DOID:193!3.32e-13!29;DOID:0060072!4.39e-07!4 | ||
|ontology_enrichment_disease_v019=DOID:2394;1.44e-20;14!DOID:0060072;2.32e-15;4!DOID:120;2.79e-12;27!DOID:0060084;3.28e-12;3!DOID:127;3.28e-12;3!DOID:193;2.71e-11;29 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,1.58e-20,14;DOID:0060072,1.55e-15,4;DOID:0060084,2.13e-12,3;DOID:127,2.13e-12,3;DOID:120,2.93e-12,27;DOID:193,2.83e-11,29 | |||
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|ontology_enrichment_uberon_v019=UBERON:0004573;1.08e-29;33!UBERON:0004571;1.08e-29;33!UBERON:0001637;8.35e-24;42!UBERON:0003509;8.35e-24;42!UBERON:0004572;8.35e-24;42!UBERON:0003834;8.80e-20;5!UBERON:0001533;8.80e-20;5!UBERON:0004237;5.15e-17;10!UBERON:0004695;5.15e-17;10!UBERON:0002111;5.15e-17;10!UBERON:0004178;5.15e-17;10!UBERON:0001135;2.95e-14;15!UBERON:0003513;4.90e-14;7!UBERON:0000992;1.53e-13;13!UBERON:0003498;4.03e-12;3!UBERON:0005985;4.03e-12;3!UBERON:0001621;4.03e-12;3!UBERON:0002118;4.46e-12;5!UBERON:0007500;5.33e-12;56!UBERON:0001981;5.33e-12;56!UBERON:0004537;5.33e-12;56!UBERON:0000991;2.85e-10;21!UBERON:0000055;4.01e-10;65!UBERON:0002119;1.21e-09;4!UBERON:0002456;3.30e-09;2!UBERON:0003134;8.68e-09;33!UBERON:0002049;1.08e-08;75!UBERON:0007798;1.08e-08;75!UBERON:0001310;1.63e-08;4!UBERON:0001529;1.93e-08;2!UBERON:0007204;1.93e-08;2!UBERON:0000474;8.96e-08;37!UBERON:0003914;1.03e-07;74!UBERON:0000947;1.36e-07;21!UBERON:0010191;1.36e-07;21!UBERON:0003100;9.74e-07;41 | |||
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|short_description=p@chr7:93516635..93516656,- | |short_description=p@chr7:93516635..93516656,- | ||
}} | }} |
Latest revision as of 12:36, 31 July 2015
Short description: | p@chr7:93516635..93516656, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr7:93516635..93516656, - |
Coexpression cluster: | C378_Smooth_mesenchymal_placenta_clear_leiomyoma_renal_Preadipocyte |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
vascular associated smooth muscle cell | 1.14e-46 | 32 |
smooth muscle cell | 3.09e-40 | 43 |
smooth muscle myoblast | 3.09e-40 | 43 |
muscle cell | 3.71e-30 | 55 |
muscle precursor cell | 2.72e-28 | 58 |
myoblast | 2.72e-28 | 58 |
multi-potent skeletal muscle stem cell | 2.72e-28 | 58 |
electrically responsive cell | 1.31e-26 | 61 |
electrically active cell | 1.31e-26 | 61 |
smooth muscle cell of the subclavian artery | 6.91e-20 | 5 |
aortic smooth muscle cell | 1.92e-17 | 10 |
mesodermal cell | 5.94e-13 | 121 |
smooth muscle cell of the coronary artery | 5.89e-12 | 3 |
smooth muscle cell of the internal thoracic artery | 3.44e-09 | 2 |
smooth muscle cell of the umbilical artery | 1.70e-08 | 4 |
smooth muscle cell of the brachiocephalic vasculature | 1.73e-08 | 2 |
cardiocyte | 4.65e-08 | 16 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 1.58e-20 | 14 |
benign neoplasm | 1.55e-15 | 4 |
cell type benign neoplasm | 2.13e-12 | 3 |
leiomyoma | 2.13e-12 | 3 |
female reproductive organ cancer | 2.93e-12 | 27 |
reproductive organ cancer | 2.83e-11 | 29 |