FFCP PHASE1:Hg19::chr7:93516582..93516600,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr7:93516582..93516600,+ | |||
|coexpression_cluster_id=C378 | |coexpression_cluster_id=C378 | ||
|description=CAGE_peak_at_chr7:93516582..93516600,+ | |description=CAGE_peak_at_chr7:93516582..93516600,+ | ||
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|ontology_enrichment_celltype=CL:0000680!3.23e-29!57;CL:0000056!3.23e-29!57;CL:0000355!3.23e-29!57;CL:0000187!1.97e-28!54;CL:0000192!1.99e-27!42;CL:0000514!1.99e-27!42;CL:0000183!3.22e-26!59;CL:0000359!4.68e-26!32;CL:0000393!3.55e-24!60;CL:0000211!3.55e-24!60;CL:0000055!1.76e-17!180;CL:0000222!3.11e-17!119;CL:0000548!9.70e-10!679;CL:0000004!9.70e-10!679;CL:0000255!9.70e-10!679;CL:0000012!1.65e-09!682;CL:0000220!2.74e-09!246;CL:0002321!4.61e-09!248;CL:0002494!1.68e-08!16;CL:0002371!2.61e-08!591;CL:0002595!3.41e-08!5;CL:0000144!6.16e-08!625;CL:0000723!7.34e-08!436;CL:0000048!1.16e-07!430;CL:0000034!1.47e-07!444 | |ontology_enrichment_celltype=CL:0000680!3.23e-29!57;CL:0000056!3.23e-29!57;CL:0000355!3.23e-29!57;CL:0000187!1.97e-28!54;CL:0000192!1.99e-27!42;CL:0000514!1.99e-27!42;CL:0000183!3.22e-26!59;CL:0000359!4.68e-26!32;CL:0000393!3.55e-24!60;CL:0000211!3.55e-24!60;CL:0000055!1.76e-17!180;CL:0000222!3.11e-17!119;CL:0000548!9.70e-10!679;CL:0000004!9.70e-10!679;CL:0000255!9.70e-10!679;CL:0000012!1.65e-09!682;CL:0000220!2.74e-09!246;CL:0002321!4.61e-09!248;CL:0002494!1.68e-08!16;CL:0002371!2.61e-08!591;CL:0002595!3.41e-08!5;CL:0000144!6.16e-08!625;CL:0000723!7.34e-08!436;CL:0000048!1.16e-07!430;CL:0000034!1.47e-07!444 | ||
|ontology_enrichment_celltype_v019=CL:0000359;3.52e-40;32!CL:0000192;1.98e-25;43!CL:0002595;7.15e-18;5!CL:0002594;2.39e-13;4!CL:0002494;1.16e-12;16!CL:0000187;5.55e-12;55!CL:0002592;5.30e-11;3!CL:0000393;1.68e-10;61!CL:0000211;1.68e-10;61!CL:0000569;1.34e-08;4!CL:0002593;1.61e-08;2!CL:0002539;5.96e-08;10!CL:0000723;5.17e-07;61!CL:0000048;5.71e-07;58!CL:0000134;9.22e-07;55 | |ontology_enrichment_celltype_v019=CL:0000359;3.52e-40;32!CL:0000192;1.98e-25;43!CL:0002595;7.15e-18;5!CL:0002594;2.39e-13;4!CL:0002494;1.16e-12;16!CL:0000187;5.55e-12;55!CL:0002592;5.30e-11;3!CL:0000393;1.68e-10;61!CL:0000211;1.68e-10;61!CL:0000569;1.34e-08;4!CL:0002593;1.61e-08;2!CL:0002539;5.96e-08;10!CL:0000723;5.17e-07;61!CL:0000048;5.71e-07;58!CL:0000134;9.22e-07;55 | ||
|ontology_enrichment_celltype_v019_2=CL:0000359,2.65e-41,32;CL:0000192,3.14e-35,43;CL:0000514,3.14e-35,43;CL:0000187,3.37e-26,55;CL:0000680,1.58e-24,58;CL:0000056,1.58e-24,58;CL:0000355,1.58e-24,58;CL:0000393,5.06e-23,61;CL:0000211,5.06e-23,61;CL:0002595,9.29e-18,5;CL:0002594,1.54e-13,4;CL:0002494,1.56e-12,16;CL:0002592,8.65e-11,3;CL:0000222,9.17e-11,121;CL:0000048,3.29e-09,427;CL:0000723,6.39e-09,433;CL:0000569,1.44e-08,4;CL:0000011,1.44e-08,4;CL:0000034,1.51e-08,441;CL:0002593,1.61e-08,2;CL:0002539,6.26e-08,10 | |||
|ontology_enrichment_development_v019=CL:0000514;1.98e-25;43!CL:0000355;1.48e-11;58!CL:0000011;1.34e-08;4 | |ontology_enrichment_development_v019=CL:0000514;1.98e-25;43!CL:0000355;1.48e-11;58!CL:0000011;1.34e-08;4 | ||
|ontology_enrichment_disease=DOID:2394!8.08e-11!14;DOID:120!4.02e-08!27;DOID:193!2.90e-07!29 | |ontology_enrichment_disease=DOID:2394!8.08e-11!14;DOID:120!4.02e-08!27;DOID:193!2.90e-07!29 | ||
|ontology_enrichment_disease_v019=DOID:2394;6.44e-18;14!DOID:0060084;2.38e-11;3!DOID:127;2.38e-11;3!DOID:120;1.73e-10;27!DOID:193;1.26e-09;29!DOID:0060072;1.33e-08;4 | |ontology_enrichment_disease_v019=DOID:2394;6.44e-18;14!DOID:0060084;2.38e-11;3!DOID:127;2.38e-11;3!DOID:120;1.73e-10;27!DOID:193;1.26e-09;29!DOID:0060072;1.33e-08;4 | ||
|ontology_enrichment_disease_v019_2=DOID:2394,4.43e-18,14;DOID:0060084,2.24e-11,3;DOID:127,2.24e-11,3;DOID:120,1.32e-10,27;DOID:193,9.84e-10,29;DOID:0060072,1.26e-08,4 | |||
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|short_description=p@chr7:93516582..93516600,+ | |short_description=p@chr7:93516582..93516600,+ | ||
}} | }} |
Latest revision as of 12:35, 31 July 2015
Short description: | p@chr7:93516582..93516600, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr7:93516582..93516600, + |
Coexpression cluster: | C378_Smooth_mesenchymal_placenta_clear_leiomyoma_renal_Preadipocyte |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
vascular associated smooth muscle cell | 2.65e-41 | 32 |
smooth muscle cell | 3.14e-35 | 43 |
smooth muscle myoblast | 3.14e-35 | 43 |
muscle cell | 3.37e-26 | 55 |
muscle precursor cell | 1.58e-24 | 58 |
myoblast | 1.58e-24 | 58 |
multi-potent skeletal muscle stem cell | 1.58e-24 | 58 |
electrically responsive cell | 5.06e-23 | 61 |
electrically active cell | 5.06e-23 | 61 |
smooth muscle cell of the subclavian artery | 9.29e-18 | 5 |
smooth muscle cell of the umbilical artery | 1.54e-13 | 4 |
cardiocyte | 1.56e-12 | 16 |
smooth muscle cell of the coronary artery | 8.65e-11 | 3 |
mesodermal cell | 9.17e-11 | 121 |
multi fate stem cell | 3.29e-09 | 427 |
somatic stem cell | 6.39e-09 | 433 |
cardiac mesenchymal cell | 1.44e-08 | 4 |
migratory trunk neural crest cell | 1.44e-08 | 4 |
stem cell | 1.51e-08 | 441 |
smooth muscle cell of the internal thoracic artery | 1.61e-08 | 2 |
aortic smooth muscle cell | 6.26e-08 | 10 |
Ontology term | p-value | n |
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