FFCP PHASE1:Hg19::chr7:93516564..93516575,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(10 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr7:93516564..93516575,+ | |||
|coexpression_cluster_id=C378 | |||
|description=CAGE_peak_at_chr7:93516564..93516575,+ | |description=CAGE_peak_at_chr7:93516564..93516575,+ | ||
|id=chr7:93516564..93516575,+ | |id=chr7:93516564..93516575,+ | ||
|ontology_enrichment_celltype=CL:0000680!4.75e-21!57;CL:0000056!4.75e-21!57;CL:0000355!4.75e-21!57;CL:0000187!9.61e-21!54;CL:0000359!1.42e-19!32;CL:0000192!1.52e-19!42;CL:0000514!1.52e-19!42;CL:0000183!2.07e-18!59;CL:0000393!5.44e-18!60;CL:0000211!5.44e-18!60;CL:0002494!1.13e-14!16;CL:0002595!3.80e-14!5;CL:0000055!9.89e-12!180;CL:0002592!6.44e-09!3;CL:0000222!3.18e-08!119;CL:0000048!1.43e-07!430;CL:0002582!2.28e-07!3;CL:0000723!2.85e-07!436;CL:0000034!6.92e-07!444;CL:0002593!8.16e-07!2 | |ontology_enrichment_celltype=CL:0000680!4.75e-21!57;CL:0000056!4.75e-21!57;CL:0000355!4.75e-21!57;CL:0000187!9.61e-21!54;CL:0000359!1.42e-19!32;CL:0000192!1.52e-19!42;CL:0000514!1.52e-19!42;CL:0000183!2.07e-18!59;CL:0000393!5.44e-18!60;CL:0000211!5.44e-18!60;CL:0002494!1.13e-14!16;CL:0002595!3.80e-14!5;CL:0000055!9.89e-12!180;CL:0002592!6.44e-09!3;CL:0000222!3.18e-08!119;CL:0000048!1.43e-07!430;CL:0002582!2.28e-07!3;CL:0000723!2.85e-07!436;CL:0000034!6.92e-07!444;CL:0002593!8.16e-07!2 | ||
|ontology_enrichment_celltype_v019=CL:0002595;3.34e-38;5!CL:0002593;6.29e-25;2!CL:0002494;2.19e-18;16!CL:0000359;3.11e-17;32!CL:0002592;9.25e-17;3!CL:0000569;9.75e-13;4!CL:0000192;4.19e-09;43 | |||
|ontology_enrichment_celltype_v019_2=CL:0002595,2.29e-38,5;CL:0002593,5.58e-25,2;CL:0002494,2.19e-18,16;CL:0000359,1.45e-17,32;CL:0002592,8.55e-17,3;CL:0000192,6.37e-13,43;CL:0000514,6.37e-13,43;CL:0000569,1.10e-12,4;CL:0000011,1.10e-12,4;CL:0000187,5.75e-10,55;CL:0000680,2.03e-09,58;CL:0000056,2.03e-09,58;CL:0000355,2.03e-09,58;CL:0000393,6.36e-09,61;CL:0000211,6.36e-09,61 | |||
|ontology_enrichment_development_v019=CL:0000011;9.75e-13;4!CL:0000514;4.19e-09;43 | |||
|ontology_enrichment_disease=DOID:2394!1.15e-10!14;DOID:0060084!8.13e-09!3;DOID:127!8.13e-09!3 | |||
|ontology_enrichment_disease_v019=DOID:4468;4.42e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:4468,3.48e-07,2 | |||
|ontology_enrichment_uberon=UBERON:0001134!3.32e-19!61;UBERON:0002036!3.32e-19!61;UBERON:0003082!3.32e-19!61;UBERON:0002385!2.26e-18!63;UBERON:0001015!2.26e-18!63;UBERON:0000383!2.26e-18!63;UBERON:0001637!2.15e-17!42;UBERON:0003509!2.15e-17!42;UBERON:0004572!2.15e-17!42;UBERON:0004290!2.90e-17!70;UBERON:0004872!1.95e-16!84;UBERON:0004573!2.57e-16!33;UBERON:0004571!2.57e-16!33;UBERON:0000914!5.07e-16!83;UBERON:0002329!5.07e-16!83;UBERON:0003077!5.07e-16!83;UBERON:0003059!5.07e-16!83;UBERON:0007282!5.07e-16!83;UBERON:0009618!5.07e-16!83;UBERON:0007285!5.07e-16!83;UBERON:0000486!4.70e-15!82;UBERON:0003834!3.80e-14!5;UBERON:0001533!3.80e-14!5;UBERON:0000490!1.25e-12!138;UBERON:0001981!5.79e-12!60;UBERON:0007500!5.79e-12!60;UBERON:0004537!5.79e-12!60;UBERON:0006965!5.79e-12!60;UBERON:0003513!5.90e-12!8;UBERON:0000948!5.83e-11!24;UBERON:0005498!5.83e-11!24;UBERON:0004140!5.83e-11!24;UBERON:0009881!5.83e-11!24;UBERON:0004141!5.83e-11!24;UBERON:0003084!5.83e-11!24;UBERON:0007005!5.83e-11!24;UBERON:0004139!5.83e-11!24;UBERON:0004291!5.83e-11!24;UBERON:0004535!8.22e-11!110;UBERON:0005256!8.24e-11!143;UBERON:0003914!2.03e-10!118;UBERON:0001009!2.47e-10!113;UBERON:0000055!9.97e-10!69;UBERON:0007100!1.85e-09!27;UBERON:0001621!6.44e-09!3;UBERON:0002049!7.06e-09!79;UBERON:0007798!7.06e-09!79;UBERON:0003498!7.13e-09!5;UBERON:0005985!7.13e-09!5;UBERON:0002100!3.03e-07!216;UBERON:0000926!6.28e-07!448;UBERON:0004120!6.28e-07!448;UBERON:0006603!6.28e-07!448;UBERON:0000992!7.45e-07!13;UBERON:0002456!8.16e-07!2;UBERON:0002119!8.18e-07!4;UBERON:0004531!8.18e-07!4 | |||
|ontology_enrichment_uberon_v019=UBERON:0003834;3.34e-38;5!UBERON:0001533;3.34e-38;5!UBERON:0003513;2.07e-27;7!UBERON:0002456;6.29e-25;2!UBERON:0003498;9.25e-17;3!UBERON:0005985;9.25e-17;3!UBERON:0001621;9.25e-17;3!UBERON:0000948;2.29e-13;22!UBERON:0002119;1.16e-12;4!UBERON:0007100;9.35e-12;25!UBERON:0004573;1.73e-11;33!UBERON:0004571;1.73e-11;33!UBERON:0001637;3.56e-11;42!UBERON:0003509;3.56e-11;42!UBERON:0004572;3.56e-11;42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003834,2.29e-38,5;UBERON:0001533,2.29e-38,5;UBERON:0003513,1.58e-27,7;UBERON:0002456,5.58e-25,2;UBERON:0001621,8.55e-17,3;UBERON:0001637,3.03e-13,42;UBERON:0003509,3.03e-13,42;UBERON:0004572,3.03e-13,42;UBERON:0004872,5.50e-13,83;UBERON:0004573,1.17e-12,33;UBERON:0004571,1.17e-12,33;UBERON:0002119,1.23e-12,4;UBERON:0000948,3.01e-12,24;UBERON:0005498,3.01e-12,24;UBERON:0004140,3.01e-12,24;UBERON:0009881,3.01e-12,24;UBERON:0004141,3.01e-12,24;UBERON:0003084,3.01e-12,24;UBERON:0007005,3.01e-12,24;UBERON:0004139,3.01e-12,24;UBERON:0004291,3.01e-12,24;UBERON:0007100,7.03e-11,27;UBERON:0003498,1.86e-10,5;UBERON:0005985,1.86e-10,5;UBERON:0004535,1.40e-09,109;UBERON:0001009,2.75e-09,112;UBERON:0007500,3.01e-09,59;UBERON:0001981,3.01e-09,59;UBERON:0004537,3.01e-09,59;UBERON:0006965,3.01e-09,59;UBERON:0003914,7.81e-09,117;UBERON:0001134,9.07e-09,62;UBERON:0002036,9.07e-09,62;UBERON:0003082,9.07e-09,62;UBERON:0002385,1.79e-08,64;UBERON:0001015,1.79e-08,64;UBERON:0000383,1.79e-08,64;UBERON:0000055,6.16e-08,68;UBERON:0002329,1.42e-07,71;UBERON:0003059,1.42e-07,71;UBERON:0007282,1.42e-07,71;UBERON:0004290,1.42e-07,71;UBERON:0009618,1.42e-07,71;UBERON:0003077,1.85e-07,72;UBERON:0007285,1.85e-07,72;UBERON:0007524,2.39e-07,73;UBERON:0002049,7.81e-07,78;UBERON:0007503,7.81e-07,78;UBERON:0007798,7.81e-07,78 | |||
|phase1_expression=0,0,0.140954404095971,1.0007329835313,0,0,0,0,0,0,0,0,0,0.123766352960047,0,0.672325146451775,0,0,0.487932798790507,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.290209238628584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.367663080345869,0,0,0,0,0,0,0,0,0,0,0,0.12663051166458,0,0,0,0,0,0.24666754841716,0,0.67355336034844,2.7788523529288,0,0,0,0,0,0,0,0,0.140450806702248,0,0,0,0,0.247266929278557,0,0,0,0,0,0,0,0.45071417671979,0.453728732640084,0,0,0,0.300091096084402,0.103052529238439,0,0,0,0,0,0,0,0,0,0,0.57978255948989,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234817388471643,0,0,0,0,0,0,0,0,0,0,0,0.358234090811393,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.387815147273333,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0.355391948742546,0,0,0,0,0,0,0,0,1.14861935834114,0,0.144781306667579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12269149171914,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.177561725313127,0.0821271560138091,0.519254429183621,0.116210378459959,0,0,0,0.114814448164607,0.364182336013434,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.412164046590889,0,0,0,0,0,0,0.154048617114644,0,0.275673144969061,0,0,0.0852266274161009,0,0.165284915360978,0,0,0,0,0.31481234683064,0,0,0,0,0.9266210955196,0.143124886741991,0,0,0.571890581771475,0,0,0,0.78494864019923,0.179872457583315,0.274537029736055,0,0.404364963146632,1.58510321173008,9.26768603725758,0,3.41198885483798,3.16950440270266,0,0.848432591722276,0,0.551365343546124,4.64407282668854,1.75380354101505,0,0,0.202910376962704,0,1.69017361519345,0,0,0,0,0,0,0,0,0,0,1.08890984861323,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.667852230137435,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.79556088975062,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.360299883542404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.542999601753713,0.864221491201268,2.28611152076586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.298509605773748,0,0,0,0,0.889811221596536,0.228840068396924,0,1.24349760466224,3.10495814978231,1.27437413730962,0,0.776314784381297,2.07353103920428,0.265841714557995,0,0.300515217994437,0,0.813741466409323,0.363697318405119,0.966695013382396,0,0,0,0,0,0,0.192619830407303,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184105950251841,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.327543835020193,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.354809480650555,0,0,0,0,0,0,0,0,0,0,0.647782773655864,0,0,0,0,0,0,0,0,0,0,0.118332000730565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.352894871715692,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0.140954404095971,1.0007329835313,0,0,0,0,0,0,0,0,0,0.123766352960047,0,0.672325146451775,0,0,0.487932798790507,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.290209238628584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.367663080345869,0,0,0,0,0,0,0,0,0,0,0,0.12663051166458,0,0,0,0,0,0.24666754841716,0,0.67355336034844,2.7788523529288,0,0,0,0,0,0,0,0,0.140450806702248,0,0,0,0,0.247266929278557,0,0,0,0,0,0,0,0.45071417671979,0.453728732640084,0,0,0,0.300091096084402,0.103052529238439,0,0,0,0,0,0,0,0,0,0,0.57978255948989,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234817388471643,0,0,0,0,0,0,0,0,0,0,0,0.358234090811393,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.387815147273333,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0.355391948742546,0,0,0,0,0,0,0,0,1.14861935834114,0,0.144781306667579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12269149171914,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.177561725313127,0.0821271560138091,0.519254429183621,0.116210378459959,0,0,0,0.114814448164607,0.364182336013434,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.412164046590889,0,0,0,0,0,0,0.154048617114644,0,0.275673144969061,0,0,0.0852266274161009,0,0.165284915360978,0,0,0,0,0.31481234683064,0,0,0,0,0.9266210955196,0.143124886741991,0,0,0.571890581771475,0,0,0,0.78494864019923,0.179872457583315,0.274537029736055,0,0.404364963146632,1.58510321173008,9.26768603725758,0,3.41198885483798,3.16950440270266,0,0.848432591722276,0,0.551365343546124,4.64407282668854,1.75380354101505,0,0,0.202910376962704,0,1.69017361519345,0,0,0,0,0,0,0,0,0,0,1.08890984861323,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.667852230137435,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.79556088975062,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.360299883542404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.542999601753713,0.864221491201268,2.28611152076586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.298509605773748,0,0,0,0,0.889811221596536,0.228840068396924,0,1.24349760466224,3.10495814978231,1.27437413730962,0,0.776314784381297,2.07353103920428,0.265841714557995,0,0.300515217994437,0,0.813741466409323,0.363697318405119,0.966695013382396,0,0,0,0,0,0,0.192619830407303,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184105950251841,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.327543835020193,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.354809480650555,0,0,0,0,0,0,0,0,0,0,0.647782773655864,0,0,0,0,0,0,0,0,0,0,0.118332000730565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.352894871715692,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr7:93516564..93516575,+ | |short_description=p@chr7:93516564..93516575,+ | ||
}} | }} |
Latest revision as of 12:35, 31 July 2015
Short description: | p@chr7:93516564..93516575, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr7:93516564..93516575, + |
Coexpression cluster: | C378_Smooth_mesenchymal_placenta_clear_leiomyoma_renal_Preadipocyte |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell of the subclavian artery | 2.29e-38 | 5 |
smooth muscle cell of the internal thoracic artery | 5.58e-25 | 2 |
cardiocyte | 2.19e-18 | 16 |
vascular associated smooth muscle cell | 1.45e-17 | 32 |
smooth muscle cell of the coronary artery | 8.55e-17 | 3 |
smooth muscle cell | 6.37e-13 | 43 |
smooth muscle myoblast | 6.37e-13 | 43 |
cardiac mesenchymal cell | 1.10e-12 | 4 |
migratory trunk neural crest cell | 1.10e-12 | 4 |
muscle cell | 5.75e-10 | 55 |
muscle precursor cell | 2.03e-09 | 58 |
myoblast | 2.03e-09 | 58 |
multi-potent skeletal muscle stem cell | 2.03e-09 | 58 |
electrically responsive cell | 6.36e-09 | 61 |
electrically active cell | 6.36e-09 | 61 |
Ontology term | p-value | n |
---|---|---|
clear cell adenocarcinoma | 3.48e-07 | 2 |