FFCP PHASE1:Hg19::chr7:93516178..93516195,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr7:93516178..93516195,- | |||
|coexpression_cluster_id=C378 | |||
|description=CAGE_peak_at_chr7:93516178..93516195,- | |||
|id=chr7:93516178..93516195,- | |||
|ontology_enrichment_celltype=CL:0000359!2.49e-24!32;CL:0000192!1.45e-23!42;CL:0000514!1.45e-23!42;CL:0000187!3.93e-20!54;CL:0000680!6.36e-20!57;CL:0000056!6.36e-20!57;CL:0000355!6.36e-20!57;CL:0000183!9.61e-19!59;CL:0000393!4.52e-17!60;CL:0000211!4.52e-17!60;CL:0000055!3.01e-13!180;CL:0000222!1.16e-12!119;CL:0002494!2.41e-11!16;CL:0002539!5.95e-07!10;CL:0000548!6.24e-07!679;CL:0000004!6.24e-07!679;CL:0000255!6.24e-07!679;CL:0000012!9.45e-07!682;CL:0002371!9.91e-07!591 | |||
|ontology_enrichment_celltype_v019=CL:0000359;3.89e-22;32!CL:0000192;1.71e-15;43!CL:0002595;5.33e-15;5!CL:0002494;3.18e-12;16!CL:0000569;1.70e-10;4!CL:0002593;2.33e-10;2!CL:0000187;3.17e-08;55!CL:0000393;8.44e-08;61!CL:0000211;8.44e-08;61 | |||
|ontology_enrichment_celltype_v019_2=CL:0000359,4.42e-23,32;CL:0000192,1.26e-21,43;CL:0000514,1.26e-21,43;CL:0000187,4.32e-16,55;CL:0000680,4.56e-15,58;CL:0000056,4.56e-15,58;CL:0000355,4.56e-15,58;CL:0002595,5.55e-15,5;CL:0000393,3.81e-14,61;CL:0000211,3.81e-14,61;CL:0002494,4.41e-12,16;CL:0000569,2.10e-10,4;CL:0000011,2.10e-10,4;CL:0002593,2.39e-10,2;CL:0000222,3.79e-08,121 | |||
|ontology_enrichment_development_v019=CL:0000514;1.71e-15;43!CL:0000011;1.70e-10;4!CL:0000355;8.96e-08;58!UBERON:0005795;3.81e-07;10 | |||
|ontology_enrichment_disease=DOID:2394!9.23e-17!14;DOID:120!9.10e-11!27;DOID:193!1.06e-09!29;DOID:0060072!3.34e-07!4 | |||
|ontology_enrichment_disease_v019=DOID:2394;1.24e-14;14!DOID:0060084;1.20e-13;3!DOID:127;1.20e-13;3!DOID:0060072;2.38e-10;4!DOID:120;2.89e-09;27!DOID:193;1.56e-08;29 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,1.12e-14,14;DOID:0060084,7.52e-14,3;DOID:127,7.52e-14,3;DOID:0060072,1.68e-10,4;DOID:120,2.72e-09,27;DOID:193,1.47e-08,29 | |||
|ontology_enrichment_uberon=UBERON:0004872!2.08e-23!84;UBERON:0001637!5.11e-23!42;UBERON:0003509!5.11e-23!42;UBERON:0004572!5.11e-23!42;UBERON:0004290!7.30e-19!70;UBERON:0004573!1.06e-18!33;UBERON:0004571!1.06e-18!33;UBERON:0001981!4.84e-18!60;UBERON:0007500!4.84e-18!60;UBERON:0004537!4.84e-18!60;UBERON:0006965!4.84e-18!60;UBERON:0001134!6.58e-18!61;UBERON:0002036!6.58e-18!61;UBERON:0003082!6.58e-18!61;UBERON:0003914!2.25e-17!118;UBERON:0000914!5.21e-17!83;UBERON:0002329!5.21e-17!83;UBERON:0003077!5.21e-17!83;UBERON:0003059!5.21e-17!83;UBERON:0007282!5.21e-17!83;UBERON:0009618!5.21e-17!83;UBERON:0007285!5.21e-17!83;UBERON:0002385!5.30e-17!63;UBERON:0001015!5.30e-17!63;UBERON:0000383!5.30e-17!63;UBERON:0000055!1.66e-16!69;UBERON:0004535!3.41e-15!110;UBERON:0002049!5.50e-15!79;UBERON:0007798!5.50e-15!79;UBERON:0000490!9.72e-15!138;UBERON:0001009!1.98e-14!113;UBERON:0000486!2.07e-14!82;UBERON:0005256!2.26e-14!143;UBERON:0002100!4.74e-11!216;UBERON:0000948!2.51e-09!24;UBERON:0005498!2.51e-09!24;UBERON:0004140!2.51e-09!24;UBERON:0009881!2.51e-09!24;UBERON:0004141!2.51e-09!24;UBERON:0003084!2.51e-09!24;UBERON:0007005!2.51e-09!24;UBERON:0004139!2.51e-09!24;UBERON:0004291!2.51e-09!24;UBERON:0000992!8.70e-09!13;UBERON:0000926!1.97e-08!448;UBERON:0004120!1.97e-08!448;UBERON:0006603!1.97e-08!448;UBERON:0000483!2.47e-08!309;UBERON:0003104!3.27e-08!238;UBERON:0009142!3.27e-08!238;UBERON:0003498!4.31e-08!5;UBERON:0005985!4.31e-08!5;UBERON:0000119!4.49e-08!312;UBERON:0007100!7.31e-08!27;UBERON:0002119!1.21e-07!4;UBERON:0004531!1.21e-07!4;UBERON:0000025!1.61e-07!194;UBERON:0003513!2.22e-07!8;UBERON:0000947!2.33e-07!21;UBERON:0010191!2.33e-07!21;UBERON:0004237!5.95e-07!10;UBERON:0004695!5.95e-07!10;UBERON:0002111!5.95e-07!10;UBERON:0004178!5.95e-07!10;UBERON:0000481!6.83e-07!347;UBERON:0003100!7.72e-07!41;UBERON:0001135!8.12e-07!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0002119;2.78e-18;4!UBERON:0003513;6.52e-16;7!UBERON:0003834;5.33e-15;5!UBERON:0001533;5.33e-15;5!UBERON:0001637;1.36e-14;42!UBERON:0003509;1.36e-14;42!UBERON:0004572;1.36e-14;42!UBERON:0004573;3.48e-14;33!UBERON:0004571;3.48e-14;33!UBERON:0000992;9.02e-12;13!UBERON:0003134;1.74e-10;33!UBERON:0002456;2.33e-10;2!UBERON:0000474;9.22e-10;37!UBERON:0000078;2.07e-09;2!UBERON:0002012;2.07e-09;2!UBERON:0008886;2.07e-09;2!UBERON:0000991;2.58e-09;21!UBERON:0007500;5.34e-09;56!UBERON:0001981;5.34e-09;56!UBERON:0004537;5.34e-09;56!UBERON:0003100;1.26e-08;41!UBERON:0000948;1.27e-08;22!UBERON:0007100;1.79e-07;25 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004872,1.92e-21,83;UBERON:0001637,2.54e-19,42;UBERON:0003509,2.54e-19,42;UBERON:0004572,2.54e-19,42;UBERON:0002119,2.62e-18,4;UBERON:0004573,2.88e-16,33;UBERON:0004571,2.88e-16,33;UBERON:0003513,6.97e-16,7;UBERON:0003834,5.55e-15,5;UBERON:0001533,5.55e-15,5;UBERON:0007500,1.20e-14,59;UBERON:0001981,1.20e-14,59;UBERON:0004537,1.20e-14,59;UBERON:0006965,1.20e-14,59;UBERON:0001134,7.39e-14,62;UBERON:0002036,7.39e-14,62;UBERON:0003082,7.39e-14,62;UBERON:0003498,1.51e-13,5;UBERON:0005985,1.51e-13,5;UBERON:0002385,2.61e-13,64;UBERON:0001015,2.61e-13,64;UBERON:0000383,2.61e-13,64;UBERON:0007503,2.75e-13,78;UBERON:0002329,2.93e-13,71;UBERON:0003059,2.93e-13,71;UBERON:0007282,2.93e-13,71;UBERON:0004290,2.93e-13,71;UBERON:0009618,2.93e-13,71;UBERON:0003077,5.07e-13,72;UBERON:0007285,5.07e-13,72;UBERON:0007524,8.65e-13,73;UBERON:0000948,1.31e-12,24;UBERON:0005498,1.31e-12,24;UBERON:0004140,1.31e-12,24;UBERON:0009881,1.31e-12,24;UBERON:0004141,1.31e-12,24;UBERON:0003084,1.31e-12,24;UBERON:0007005,1.31e-12,24;UBERON:0004139,1.31e-12,24;UBERON:0004291,1.31e-12,24;UBERON:0000055,3.17e-12,68;UBERON:0003914,3.48e-12,117;UBERON:0003134,3.68e-12,37;UBERON:0000474,3.68e-12,37;UBERON:0004535,4.36e-12,109;UBERON:0000992,8.47e-12,13;UBERON:0001009,1.24e-11,112;UBERON:0000926,3.65e-11,315;UBERON:0004120,3.65e-11,315;UBERON:0006603,3.65e-11,315;UBERON:0007100,4.95e-11,27;UBERON:0000486,8.75e-11,83;UBERON:0003100,9.42e-11,41;UBERON:0003133,1.39e-10,48;UBERON:0002456,2.39e-10,2;UBERON:0002049,3.36e-10,78;UBERON:0007798,3.36e-10,78;UBERON:0005156,1.28e-09,59;UBERON:0000990,1.28e-09,59;UBERON:0000991,2.32e-09,21;UBERON:0009196,2.32e-09,21;UBERON:0009117,2.32e-09,21;UBERON:0005564,2.32e-09,21;UBERON:0000078,3.38e-09,2;UBERON:0007497,3.38e-09,2;UBERON:0003643,3.38e-09,2;UBERON:0003504,3.38e-09,2;UBERON:0003469,3.38e-09,2;UBERON:0003496,3.38e-09,2;UBERON:0002012,3.38e-09,2;UBERON:0008886,3.38e-09,2;UBERON:0007303,3.38e-09,2;UBERON:0002061,3.38e-09,2;UBERON:0005432,3.38e-09,2;UBERON:0004363,3.38e-09,2;UBERON:0005256,4.47e-09,122;UBERON:0004176,6.85e-09,22;UBERON:0000490,1.39e-07,148;UBERON:0003104,1.51e-07,160;UBERON:0009142,1.51e-07,160;UBERON:0003081,4.47e-07,203 | |||
|phase1_expression=0,0,0,2.00146596706261,0,1.74467704820074,0,0,0,0.245733936501509,1.39560233594486,0,0,0.247532705920093,0,1.34465029290355,0,0.730310090387373,1.46379839637152,0,0,0,0,0,0,0,0,0,0,0,0,0.919421224478927,0.30120591877825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.290209238628584,0,0.622822248995575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0,0.361439152384566,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.198762407366705,0,0.347140501607594,0.56530794192401,0,0,0,0,0,0,0,0,0,0.367663080345869,0,0.17859945656816,0,0,0,0,0,0,0,0,0,0.379891534993739,0,0,0,0,1.06748995729705,0,0.311211035399766,0.67355336034844,2.12500474047496,0,0,0,1.24864030732128,0.570471821544449,0.448346041655403,0,0,0.140450806702248,0.204154171254893,0,0,0,0,0,0.718618141816238,0,0,0,0,0,0.45071417671979,1.02088964844019,0.358779271377724,0,0,0.600182192168805,0,0,0,0.168776332241266,0,0,0,0,0,0,0,0,0,0,0,0,0.116193942869518,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.40241773803446,0.4115740113314,0,0,0,0,0,0,0.171567810298526,0,0,0.301586917234893,0.0925884451585296,0,0,0,0,0.117408694235822,0.144366447761074,0,0,0,0,0,0,0,0,0,0.141775097242386,0.268675568108545,0.581267877027924,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.904902010304444,0,0,0.531876233169741,0,0,0,0,0.142977993658148,0,0,0,0,1.58390374586686,0,0,0,0,0,0,0,0,0,0.579125226670317,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24538298343828,0.500170521059677,0.271265023699736,0,0,0,0,0,0,0,0,0,0,0.195801157462741,0,0,0,0,0,0,0,0,0,0,0.128139149255701,0,0.160853921143607,0,0,0.887808626565635,0.164254312027618,1.55776328755086,0.581051892299796,0,0,0.0920809889358963,0.229628896329213,0.546273504020151,0,0,0.231046011313244,0,0,0.211103257785751,0,0,0.431831832204279,0,0,0,0.254876273045038,0,0,0,0,0,0,0,1.23649213977267,0,0,0,0,1.6068392984416,0,0.154048617114644,0,0,0,0,0.340906509664404,0,0.165284915360978,0,0.127612712494584,0,0,0.94443704049192,0,1.84820148105653,1.06461206063404,0.869932992075073,3.15051172476664,0.429374660225974,0,0,0.571890581771475,0,0,0.636406495851874,3.92474320099615,0,0.54907405947211,0.942499218765491,0.404364963146632,1.58510321173008,2.10629228119491,0,10.2359665645139,6.33900880540533,0,1.55545975149084,2.26016233240486,0,3.3171948762061,5.26141062304515,0,0,0.811641507850816,0.6196469961995,0.845086807596724,0.143411352204052,0,1.07001315444375,1.77380532035299,0,0,0,0,0,0,0,1.31801321087491,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.66963057534359,0,0,0,0,0,0.102268682502155,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236387681767936,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210998064528027,5.38668266925187,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.661983911750998,0,0,0,0,0.347119476670262,0,0,0,0.171986032471617,0,0,0,0,0,0,0,0.794858446811959,0,0,0.0801588202515337,0,0,0,0,0,0.14405479798815,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.720599767084807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.97216073266129,0,0,0,0,1.62899880526114,2.5926644736038,5.87857248196936,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.597019211547496,0,0.554805861502613,0,0,0,1.14420034198462,0.151230923763239,3.41961841282117,6.80133689952316,5.25679331640218,2.24901556081802,2.79473322377267,9.95294898818053,2.39257543102195,0.521745061811734,0.751288044986092,0.380805212168795,2.44122439922797,0.727394636810238,2.25562169789226,0,0.398095888698616,0,0,0,0,0.192619830407303,0,0,0,0,0,0,0,0,0.176689145945881,0,0,0,0,0,0,0,0.132864840313363,0,0,1.2288645437686,0,0,0,0,0,0.920529751259204,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163771917510097,0,0,0,0,0,0,0,0,0,0.894336993477167,0,0,0,0,3.28198769601764,0,0,0,0,0,0,0,0,0,0,1.94334832096759,0,0.142953088353313,0,0.581207126840626,0,0,0,0,0,0,0.473328002922261,0,0,0,0,0,0.671132590786754,0,0,0,0,0,0,0,0,0,0,0.109940516745429,0,0,0,0,0,0,0,0,0,0.339854229375634,0,0.0644578879735772,0,0,0.705789743431384,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr7:93516178..93516195,- | |||
}} |
Latest revision as of 12:35, 31 July 2015
Short description: | p@chr7:93516178..93516195, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr7:93516178..93516195, - |
Coexpression cluster: | C378_Smooth_mesenchymal_placenta_clear_leiomyoma_renal_Preadipocyte |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
vascular associated smooth muscle cell | 4.42e-23 | 32 |
smooth muscle cell | 1.26e-21 | 43 |
smooth muscle myoblast | 1.26e-21 | 43 |
muscle cell | 4.32e-16 | 55 |
muscle precursor cell | 4.56e-15 | 58 |
myoblast | 4.56e-15 | 58 |
multi-potent skeletal muscle stem cell | 4.56e-15 | 58 |
smooth muscle cell of the subclavian artery | 5.55e-15 | 5 |
electrically responsive cell | 3.81e-14 | 61 |
electrically active cell | 3.81e-14 | 61 |
cardiocyte | 4.41e-12 | 16 |
cardiac mesenchymal cell | 2.10e-10 | 4 |
migratory trunk neural crest cell | 2.10e-10 | 4 |
smooth muscle cell of the internal thoracic artery | 2.39e-10 | 2 |
mesodermal cell | 3.79e-08 | 121 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 1.12e-14 | 14 |
cell type benign neoplasm | 7.52e-14 | 3 |
leiomyoma | 7.52e-14 | 3 |
benign neoplasm | 1.68e-10 | 4 |