FFCP PHASE1:Hg19::chr7:93516178..93516195,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr7:93516178..93516195,- | |||
|coexpression_cluster_id=C378 | |||
|description=CAGE_peak_at_chr7:93516178..93516195,- | |description=CAGE_peak_at_chr7:93516178..93516195,- | ||
|id=chr7:93516178..93516195,- | |id=chr7:93516178..93516195,- | ||
|ontology_enrichment_celltype=CL:0000359!2.49e-24!32;CL:0000192!1.45e-23!42;CL:0000514!1.45e-23!42;CL:0000187!3.93e-20!54;CL:0000680!6.36e-20!57;CL:0000056!6.36e-20!57;CL:0000355!6.36e-20!57;CL:0000183!9.61e-19!59;CL:0000393!4.52e-17!60;CL:0000211!4.52e-17!60;CL:0000055!3.01e-13!180;CL:0000222!1.16e-12!119;CL:0002494!2.41e-11!16;CL:0002539!5.95e-07!10;CL:0000548!6.24e-07!679;CL:0000004!6.24e-07!679;CL:0000255!6.24e-07!679;CL:0000012!9.45e-07!682;CL:0002371!9.91e-07!591 | |ontology_enrichment_celltype=CL:0000359!2.49e-24!32;CL:0000192!1.45e-23!42;CL:0000514!1.45e-23!42;CL:0000187!3.93e-20!54;CL:0000680!6.36e-20!57;CL:0000056!6.36e-20!57;CL:0000355!6.36e-20!57;CL:0000183!9.61e-19!59;CL:0000393!4.52e-17!60;CL:0000211!4.52e-17!60;CL:0000055!3.01e-13!180;CL:0000222!1.16e-12!119;CL:0002494!2.41e-11!16;CL:0002539!5.95e-07!10;CL:0000548!6.24e-07!679;CL:0000004!6.24e-07!679;CL:0000255!6.24e-07!679;CL:0000012!9.45e-07!682;CL:0002371!9.91e-07!591 | ||
|ontology_enrichment_celltype_v019=CL:0000359;3.89e-22;32!CL:0000192;1.71e-15;43!CL:0002595;5.33e-15;5!CL:0002494;3.18e-12;16!CL:0000569;1.70e-10;4!CL:0002593;2.33e-10;2!CL:0000187;3.17e-08;55!CL:0000393;8.44e-08;61!CL:0000211;8.44e-08;61 | |||
|ontology_enrichment_celltype_v019_2=CL:0000359,4.42e-23,32;CL:0000192,1.26e-21,43;CL:0000514,1.26e-21,43;CL:0000187,4.32e-16,55;CL:0000680,4.56e-15,58;CL:0000056,4.56e-15,58;CL:0000355,4.56e-15,58;CL:0002595,5.55e-15,5;CL:0000393,3.81e-14,61;CL:0000211,3.81e-14,61;CL:0002494,4.41e-12,16;CL:0000569,2.10e-10,4;CL:0000011,2.10e-10,4;CL:0002593,2.39e-10,2;CL:0000222,3.79e-08,121 | |||
|ontology_enrichment_development_v019=CL:0000514;1.71e-15;43!CL:0000011;1.70e-10;4!CL:0000355;8.96e-08;58!UBERON:0005795;3.81e-07;10 | |||
|ontology_enrichment_disease=DOID:2394!9.23e-17!14;DOID:120!9.10e-11!27;DOID:193!1.06e-09!29;DOID:0060072!3.34e-07!4 | |||
|ontology_enrichment_disease_v019=DOID:2394;1.24e-14;14!DOID:0060084;1.20e-13;3!DOID:127;1.20e-13;3!DOID:0060072;2.38e-10;4!DOID:120;2.89e-09;27!DOID:193;1.56e-08;29 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,1.12e-14,14;DOID:0060084,7.52e-14,3;DOID:127,7.52e-14,3;DOID:0060072,1.68e-10,4;DOID:120,2.72e-09,27;DOID:193,1.47e-08,29 | |||
|ontology_enrichment_uberon=UBERON:0004872!2.08e-23!84;UBERON:0001637!5.11e-23!42;UBERON:0003509!5.11e-23!42;UBERON:0004572!5.11e-23!42;UBERON:0004290!7.30e-19!70;UBERON:0004573!1.06e-18!33;UBERON:0004571!1.06e-18!33;UBERON:0001981!4.84e-18!60;UBERON:0007500!4.84e-18!60;UBERON:0004537!4.84e-18!60;UBERON:0006965!4.84e-18!60;UBERON:0001134!6.58e-18!61;UBERON:0002036!6.58e-18!61;UBERON:0003082!6.58e-18!61;UBERON:0003914!2.25e-17!118;UBERON:0000914!5.21e-17!83;UBERON:0002329!5.21e-17!83;UBERON:0003077!5.21e-17!83;UBERON:0003059!5.21e-17!83;UBERON:0007282!5.21e-17!83;UBERON:0009618!5.21e-17!83;UBERON:0007285!5.21e-17!83;UBERON:0002385!5.30e-17!63;UBERON:0001015!5.30e-17!63;UBERON:0000383!5.30e-17!63;UBERON:0000055!1.66e-16!69;UBERON:0004535!3.41e-15!110;UBERON:0002049!5.50e-15!79;UBERON:0007798!5.50e-15!79;UBERON:0000490!9.72e-15!138;UBERON:0001009!1.98e-14!113;UBERON:0000486!2.07e-14!82;UBERON:0005256!2.26e-14!143;UBERON:0002100!4.74e-11!216;UBERON:0000948!2.51e-09!24;UBERON:0005498!2.51e-09!24;UBERON:0004140!2.51e-09!24;UBERON:0009881!2.51e-09!24;UBERON:0004141!2.51e-09!24;UBERON:0003084!2.51e-09!24;UBERON:0007005!2.51e-09!24;UBERON:0004139!2.51e-09!24;UBERON:0004291!2.51e-09!24;UBERON:0000992!8.70e-09!13;UBERON:0000926!1.97e-08!448;UBERON:0004120!1.97e-08!448;UBERON:0006603!1.97e-08!448;UBERON:0000483!2.47e-08!309;UBERON:0003104!3.27e-08!238;UBERON:0009142!3.27e-08!238;UBERON:0003498!4.31e-08!5;UBERON:0005985!4.31e-08!5;UBERON:0000119!4.49e-08!312;UBERON:0007100!7.31e-08!27;UBERON:0002119!1.21e-07!4;UBERON:0004531!1.21e-07!4;UBERON:0000025!1.61e-07!194;UBERON:0003513!2.22e-07!8;UBERON:0000947!2.33e-07!21;UBERON:0010191!2.33e-07!21;UBERON:0004237!5.95e-07!10;UBERON:0004695!5.95e-07!10;UBERON:0002111!5.95e-07!10;UBERON:0004178!5.95e-07!10;UBERON:0000481!6.83e-07!347;UBERON:0003100!7.72e-07!41;UBERON:0001135!8.12e-07!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0002119;2.78e-18;4!UBERON:0003513;6.52e-16;7!UBERON:0003834;5.33e-15;5!UBERON:0001533;5.33e-15;5!UBERON:0001637;1.36e-14;42!UBERON:0003509;1.36e-14;42!UBERON:0004572;1.36e-14;42!UBERON:0004573;3.48e-14;33!UBERON:0004571;3.48e-14;33!UBERON:0000992;9.02e-12;13!UBERON:0003134;1.74e-10;33!UBERON:0002456;2.33e-10;2!UBERON:0000474;9.22e-10;37!UBERON:0000078;2.07e-09;2!UBERON:0002012;2.07e-09;2!UBERON:0008886;2.07e-09;2!UBERON:0000991;2.58e-09;21!UBERON:0007500;5.34e-09;56!UBERON:0001981;5.34e-09;56!UBERON:0004537;5.34e-09;56!UBERON:0003100;1.26e-08;41!UBERON:0000948;1.27e-08;22!UBERON:0007100;1.79e-07;25 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004872,1.92e-21,83;UBERON:0001637,2.54e-19,42;UBERON:0003509,2.54e-19,42;UBERON:0004572,2.54e-19,42;UBERON:0002119,2.62e-18,4;UBERON:0004573,2.88e-16,33;UBERON:0004571,2.88e-16,33;UBERON:0003513,6.97e-16,7;UBERON:0003834,5.55e-15,5;UBERON:0001533,5.55e-15,5;UBERON:0007500,1.20e-14,59;UBERON:0001981,1.20e-14,59;UBERON:0004537,1.20e-14,59;UBERON:0006965,1.20e-14,59;UBERON:0001134,7.39e-14,62;UBERON:0002036,7.39e-14,62;UBERON:0003082,7.39e-14,62;UBERON:0003498,1.51e-13,5;UBERON:0005985,1.51e-13,5;UBERON:0002385,2.61e-13,64;UBERON:0001015,2.61e-13,64;UBERON:0000383,2.61e-13,64;UBERON:0007503,2.75e-13,78;UBERON:0002329,2.93e-13,71;UBERON:0003059,2.93e-13,71;UBERON:0007282,2.93e-13,71;UBERON:0004290,2.93e-13,71;UBERON:0009618,2.93e-13,71;UBERON:0003077,5.07e-13,72;UBERON:0007285,5.07e-13,72;UBERON:0007524,8.65e-13,73;UBERON:0000948,1.31e-12,24;UBERON:0005498,1.31e-12,24;UBERON:0004140,1.31e-12,24;UBERON:0009881,1.31e-12,24;UBERON:0004141,1.31e-12,24;UBERON:0003084,1.31e-12,24;UBERON:0007005,1.31e-12,24;UBERON:0004139,1.31e-12,24;UBERON:0004291,1.31e-12,24;UBERON:0000055,3.17e-12,68;UBERON:0003914,3.48e-12,117;UBERON:0003134,3.68e-12,37;UBERON:0000474,3.68e-12,37;UBERON:0004535,4.36e-12,109;UBERON:0000992,8.47e-12,13;UBERON:0001009,1.24e-11,112;UBERON:0000926,3.65e-11,315;UBERON:0004120,3.65e-11,315;UBERON:0006603,3.65e-11,315;UBERON:0007100,4.95e-11,27;UBERON:0000486,8.75e-11,83;UBERON:0003100,9.42e-11,41;UBERON:0003133,1.39e-10,48;UBERON:0002456,2.39e-10,2;UBERON:0002049,3.36e-10,78;UBERON:0007798,3.36e-10,78;UBERON:0005156,1.28e-09,59;UBERON:0000990,1.28e-09,59;UBERON:0000991,2.32e-09,21;UBERON:0009196,2.32e-09,21;UBERON:0009117,2.32e-09,21;UBERON:0005564,2.32e-09,21;UBERON:0000078,3.38e-09,2;UBERON:0007497,3.38e-09,2;UBERON:0003643,3.38e-09,2;UBERON:0003504,3.38e-09,2;UBERON:0003469,3.38e-09,2;UBERON:0003496,3.38e-09,2;UBERON:0002012,3.38e-09,2;UBERON:0008886,3.38e-09,2;UBERON:0007303,3.38e-09,2;UBERON:0002061,3.38e-09,2;UBERON:0005432,3.38e-09,2;UBERON:0004363,3.38e-09,2;UBERON:0005256,4.47e-09,122;UBERON:0004176,6.85e-09,22;UBERON:0000490,1.39e-07,148;UBERON:0003104,1.51e-07,160;UBERON:0009142,1.51e-07,160;UBERON:0003081,4.47e-07,203 | |||
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|short_description=p@chr7:93516178..93516195,- | |short_description=p@chr7:93516178..93516195,- | ||
}} | }} |
Latest revision as of 12:35, 31 July 2015
Short description: | p@chr7:93516178..93516195, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr7:93516178..93516195, - |
Coexpression cluster: | C378_Smooth_mesenchymal_placenta_clear_leiomyoma_renal_Preadipocyte |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
vascular associated smooth muscle cell | 4.42e-23 | 32 |
smooth muscle cell | 1.26e-21 | 43 |
smooth muscle myoblast | 1.26e-21 | 43 |
muscle cell | 4.32e-16 | 55 |
muscle precursor cell | 4.56e-15 | 58 |
myoblast | 4.56e-15 | 58 |
multi-potent skeletal muscle stem cell | 4.56e-15 | 58 |
smooth muscle cell of the subclavian artery | 5.55e-15 | 5 |
electrically responsive cell | 3.81e-14 | 61 |
electrically active cell | 3.81e-14 | 61 |
cardiocyte | 4.41e-12 | 16 |
cardiac mesenchymal cell | 2.10e-10 | 4 |
migratory trunk neural crest cell | 2.10e-10 | 4 |
smooth muscle cell of the internal thoracic artery | 2.39e-10 | 2 |
mesodermal cell | 3.79e-08 | 121 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 1.12e-14 | 14 |
cell type benign neoplasm | 7.52e-14 | 3 |
leiomyoma | 7.52e-14 | 3 |
benign neoplasm | 1.68e-10 | 4 |