FFCP PHASE1:Hg19::chr7:93515840..93515856,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr7:93515840..93515856,- | |||
|coexpression_cluster_id=C378 | |||
|description=CAGE_peak_at_chr7:93515840..93515856,- | |description=CAGE_peak_at_chr7:93515840..93515856,- | ||
|id=chr7:93515840..93515856,- | |id=chr7:93515840..93515856,- | ||
|ontology_enrichment_celltype=CL:0000192!1.95e-23!42;CL:0000514!1.95e-23!42;CL:0000359!2.19e-20!32;CL:0000680!3.97e-20!57;CL:0000056!3.97e-20!57;CL:0000355!3.97e-20!57;CL:0000187!8.98e-19!54;CL:0000183!2.12e-16!59;CL:0000393!5.65e-16!60;CL:0000211!5.65e-16!60;CL:0000055!1.41e-11!180;CL:0000222!8.36e-11!119;CL:0002595!1.50e-09!5;CL:0002539!8.36e-08!10 | |ontology_enrichment_celltype=CL:0000192!1.95e-23!42;CL:0000514!1.95e-23!42;CL:0000359!2.19e-20!32;CL:0000680!3.97e-20!57;CL:0000056!3.97e-20!57;CL:0000355!3.97e-20!57;CL:0000187!8.98e-19!54;CL:0000183!2.12e-16!59;CL:0000393!5.65e-16!60;CL:0000211!5.65e-16!60;CL:0000055!1.41e-11!180;CL:0000222!8.36e-11!119;CL:0002595!1.50e-09!5;CL:0002539!8.36e-08!10 | ||
|ontology_enrichment_celltype_v019=CL:0002595;5.52e-26;5!CL:0000359;1.50e-16;32!CL:0000569;3.10e-12;4!CL:0002593;1.38e-11;2!CL:0000192;3.28e-09;43!CL:0002494;7.39e-08;16!CL:0002592;8.76e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002595,8.40e-26,5;CL:0000359,1.62e-17,32;CL:0000192,1.73e-12,43;CL:0000514,1.73e-12,43;CL:0000569,2.56e-12,4;CL:0000011,2.56e-12,4;CL:0002593,1.95e-11,2;CL:0000187,2.63e-09,55;CL:0000680,1.02e-08,58;CL:0000056,1.02e-08,58;CL:0000355,1.02e-08,58;CL:0000393,3.45e-08,61;CL:0000211,3.45e-08,61;CL:0002494,6.97e-08,16;CL:0002592,9.08e-08,3 | |||
|ontology_enrichment_development_v019=CL:0000011;3.10e-12;4!CL:0000514;3.28e-09;43!UBERON:0003124;7.76e-07;1 | |||
|ontology_enrichment_disease=DOID:2394!5.44e-14!14;DOID:120!5.91e-11!27;DOID:193!6.65e-10!29;DOID:0060072!1.29e-07!4 | |ontology_enrichment_disease=DOID:2394!5.44e-14!14;DOID:120!5.91e-11!27;DOID:193!6.65e-10!29;DOID:0060072!1.29e-07!4 | ||
|ontology_enrichment_disease_v019=DOID:2394;8.38e-29;14!DOID:120;1.12e-17;27!DOID:193;2.50e-16;29!DOID:0060084;3.87e-08;3!DOID:127;3.87e-08;3 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,8.56e-29,14;DOID:120,1.14e-17,27;DOID:193,2.53e-16,29;DOID:0060084,4.09e-08,3;DOID:127,4.09e-08,3 | |||
|ontology_enrichment_uberon=UBERON:0002385!1.49e-18!63;UBERON:0001015!1.49e-18!63;UBERON:0000383!1.49e-18!63;UBERON:0001134!3.72e-18!61;UBERON:0002036!3.72e-18!61;UBERON:0003082!3.72e-18!61;UBERON:0004290!3.91e-17!70;UBERON:0001637!4.05e-17!42;UBERON:0003509!4.05e-17!42;UBERON:0004572!4.05e-17!42;UBERON:0004573!6.77e-16!33;UBERON:0004571!6.77e-16!33;UBERON:0000914!7.86e-15!83;UBERON:0002329!7.86e-15!83;UBERON:0003077!7.86e-15!83;UBERON:0003059!7.86e-15!83;UBERON:0007282!7.86e-15!83;UBERON:0009618!7.86e-15!83;UBERON:0007285!7.86e-15!83;UBERON:0001981!4.07e-14!60;UBERON:0007500!4.07e-14!60;UBERON:0004537!4.07e-14!60;UBERON:0006965!4.07e-14!60;UBERON:0004872!1.11e-13!84;UBERON:0000055!3.02e-13!69;UBERON:0000486!3.71e-13!82;UBERON:0002049!2.11e-12!79;UBERON:0007798!2.11e-12!79;UBERON:0000490!7.64e-12!138;UBERON:0001135!4.50e-11!15;UBERON:0004535!2.96e-10!110;UBERON:0000992!4.65e-10!13;UBERON:0001009!1.02e-09!113;UBERON:0003914!1.40e-09!118;UBERON:0003834!1.50e-09!5;UBERON:0001533!1.50e-09!5;UBERON:0002100!2.53e-09!216;UBERON:0005256!4.45e-09!143;UBERON:0002119!6.01e-08!4;UBERON:0004531!6.01e-08!4;UBERON:0003513!8.33e-08!8;UBERON:0004237!8.36e-08!10;UBERON:0004695!8.36e-08!10;UBERON:0002111!8.36e-08!10;UBERON:0004178!8.36e-08!10;UBERON:0003100!1.00e-07!41;UBERON:0000947!1.78e-07!21;UBERON:0010191!1.78e-07!21;UBERON:0003134!4.94e-07!37;UBERON:0000474!4.94e-07!37 | |ontology_enrichment_uberon=UBERON:0002385!1.49e-18!63;UBERON:0001015!1.49e-18!63;UBERON:0000383!1.49e-18!63;UBERON:0001134!3.72e-18!61;UBERON:0002036!3.72e-18!61;UBERON:0003082!3.72e-18!61;UBERON:0004290!3.91e-17!70;UBERON:0001637!4.05e-17!42;UBERON:0003509!4.05e-17!42;UBERON:0004572!4.05e-17!42;UBERON:0004573!6.77e-16!33;UBERON:0004571!6.77e-16!33;UBERON:0000914!7.86e-15!83;UBERON:0002329!7.86e-15!83;UBERON:0003077!7.86e-15!83;UBERON:0003059!7.86e-15!83;UBERON:0007282!7.86e-15!83;UBERON:0009618!7.86e-15!83;UBERON:0007285!7.86e-15!83;UBERON:0001981!4.07e-14!60;UBERON:0007500!4.07e-14!60;UBERON:0004537!4.07e-14!60;UBERON:0006965!4.07e-14!60;UBERON:0004872!1.11e-13!84;UBERON:0000055!3.02e-13!69;UBERON:0000486!3.71e-13!82;UBERON:0002049!2.11e-12!79;UBERON:0007798!2.11e-12!79;UBERON:0000490!7.64e-12!138;UBERON:0001135!4.50e-11!15;UBERON:0004535!2.96e-10!110;UBERON:0000992!4.65e-10!13;UBERON:0001009!1.02e-09!113;UBERON:0003914!1.40e-09!118;UBERON:0003834!1.50e-09!5;UBERON:0001533!1.50e-09!5;UBERON:0002100!2.53e-09!216;UBERON:0005256!4.45e-09!143;UBERON:0002119!6.01e-08!4;UBERON:0004531!6.01e-08!4;UBERON:0003513!8.33e-08!8;UBERON:0004237!8.36e-08!10;UBERON:0004695!8.36e-08!10;UBERON:0002111!8.36e-08!10;UBERON:0004178!8.36e-08!10;UBERON:0003100!1.00e-07!41;UBERON:0000947!1.78e-07!21;UBERON:0010191!1.78e-07!21;UBERON:0003134!4.94e-07!37;UBERON:0000474!4.94e-07!37 | ||
|ontology_enrichment_uberon_v019=UBERON:0003834;5.52e-26;5!UBERON:0001533;5.52e-26;5!UBERON:0000992;5.68e-19;13!UBERON:0003513;1.63e-18;7!UBERON:0002118;1.44e-16;5!UBERON:0004573;2.09e-14;33!UBERON:0004571;2.09e-14;33!UBERON:0001637;1.67e-13;42!UBERON:0003509;1.67e-13;42!UBERON:0004572;1.67e-13;42!UBERON:0002119;5.85e-13;4!UBERON:0002456;1.38e-11;2!UBERON:0000991;2.14e-11;21!UBERON:0003134;2.12e-10;33!UBERON:0000474;2.88e-09;37!UBERON:0003100;6.58e-09;41!UBERON:0003498;8.76e-08;3!UBERON:0005985;8.76e-08;3!UBERON:0001621;8.76e-08;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003834,8.40e-26,5;UBERON:0001533,8.40e-26,5;UBERON:0000992,4.71e-19,13;UBERON:0003513,2.19e-18,7;UBERON:0004573,6.61e-17,33;UBERON:0004571,6.61e-17,33;UBERON:0002118,9.79e-17,5;UBERON:0001637,2.53e-15,42;UBERON:0003509,2.53e-15,42;UBERON:0004572,2.53e-15,42;UBERON:0004872,2.45e-14,83;UBERON:0002119,6.48e-13,4;UBERON:0003134,1.69e-12,37;UBERON:0000474,1.69e-12,37;UBERON:0007500,3.69e-12,59;UBERON:0001981,3.69e-12,59;UBERON:0004537,3.69e-12,59;UBERON:0006965,3.69e-12,59;UBERON:0000991,1.91e-11,21;UBERON:0009196,1.91e-11,21;UBERON:0009117,1.91e-11,21;UBERON:0005564,1.91e-11,21;UBERON:0002456,1.95e-11,2;UBERON:0003100,4.25e-11,41;UBERON:0004176,6.99e-11,22;UBERON:0000055,3.36e-10,68;UBERON:0003133,3.27e-09,48;UBERON:0003914,4.84e-09,117;UBERON:0004535,1.06e-08,109;UBERON:0002049,1.47e-08,78;UBERON:0007798,1.47e-08,78;UBERON:0001009,2.23e-08,112;UBERON:0001134,5.04e-08,62;UBERON:0002036,5.04e-08,62;UBERON:0003082,5.04e-08,62;UBERON:0001621,9.08e-08,3;UBERON:0002385,1.04e-07,64;UBERON:0001015,1.04e-07,64;UBERON:0000383,1.04e-07,64;UBERON:0007503,3.66e-07,78;UBERON:0005156,3.70e-07,59;UBERON:0000990,3.70e-07,59;UBERON:0002329,9.43e-07,71;UBERON:0003059,9.43e-07,71;UBERON:0007282,9.43e-07,71;UBERON:0004290,9.43e-07,71;UBERON:0009618,9.43e-07,71 | |||
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|short_description=p@chr7:93515840..93515856,- | |short_description=p@chr7:93515840..93515856,- | ||
}} | }} |
Latest revision as of 12:35, 31 July 2015
Short description: | p@chr7:93515840..93515856, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr7:93515840..93515856, - |
Coexpression cluster: | C378_Smooth_mesenchymal_placenta_clear_leiomyoma_renal_Preadipocyte |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell of the subclavian artery | 8.40e-26 | 5 |
vascular associated smooth muscle cell | 1.62e-17 | 32 |
smooth muscle cell | 1.73e-12 | 43 |
smooth muscle myoblast | 1.73e-12 | 43 |
cardiac mesenchymal cell | 2.56e-12 | 4 |
migratory trunk neural crest cell | 2.56e-12 | 4 |
smooth muscle cell of the internal thoracic artery | 1.95e-11 | 2 |
muscle cell | 2.63e-09 | 55 |
muscle precursor cell | 1.02e-08 | 58 |
myoblast | 1.02e-08 | 58 |
multi-potent skeletal muscle stem cell | 1.02e-08 | 58 |
electrically responsive cell | 3.45e-08 | 61 |
electrically active cell | 3.45e-08 | 61 |
cardiocyte | 6.97e-08 | 16 |
smooth muscle cell of the coronary artery | 9.08e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 8.56e-29 | 14 |
female reproductive organ cancer | 1.14e-17 | 27 |
reproductive organ cancer | 2.53e-16 | 29 |
cell type benign neoplasm | 4.09e-08 | 3 |
leiomyoma | 4.09e-08 | 3 |