FFCP PHASE1:Hg19::chr7:81337867..81337871,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr7:81337867..81337871,+ | |||
|coexpression_cluster_id=C2903 | |coexpression_cluster_id=C2903 | ||
|description=CAGE_peak_at_chr7:81337867..81337871,+ | |description=CAGE_peak_at_chr7:81337867..81337871,+ | ||
|id=chr7:81337867..81337871,+ | |id=chr7:81337867..81337871,+ | ||
|ontology_enrichment_celltype=CL:0000188;6.91e-79;9!CL:0000594;1.22e-59;3!CL:0000680;4.46e-26;7!CL:0000187;3.96e-13;55!CL:0000393;1.52e-09;61!CL:0000211;1.52e-09;61 | |ontology_enrichment_celltype=CL:0000188!1.69e-10!9;CL:0000594!5.94e-09!3;CL:0002504!4.80e-08!3;CL:1000279!4.80e-08!3;CL:1000280!4.80e-08!3;CL:0002622!4.92e-08!3;CL:0002150!2.18e-07!3;CL:0000861!2.18e-07!3 | ||
| | |ontology_enrichment_celltype_v019=CL:0000188;6.91e-79;9!CL:0000594;1.22e-59;3!CL:0000680;4.46e-26;7!CL:0000187;3.96e-13;55!CL:0000393;1.52e-09;61!CL:0000211;1.52e-09;61 | ||
|ontology_enrichment_disease=DOID:4556;6.78e-08;3 | |ontology_enrichment_celltype_v019_2=CL:0000188,9.06e-79,9;CL:0000594,9.99e-60,3;CL:0000187,5.81e-13,55;CL:0000680,2.74e-12,58;CL:0000056,2.74e-12,58;CL:0000355,2.74e-12,58;CL:0000393,1.11e-11,61;CL:0000211,1.11e-11,61 | ||
|ontology_enrichment_uberon=UBERON:0001134;1.71e-44;16!UBERON:0002036;1.71e-44;16!UBERON:0002385;2.21e-22;31!UBERON:0001015;2.21e-22;31!UBERON:0000383;2.21e-22;31!UBERON:0002204;6.83e-07;70 | |ontology_enrichment_development_v019=CL:0000355;2.46e-09;58 | ||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:4556;6.78e-08;3 | |||
|ontology_enrichment_disease_v019_2=DOID:4556,6.34e-08,3 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0001134;1.71e-44;16!UBERON:0002036;1.71e-44;16!UBERON:0002385;2.21e-22;31!UBERON:0001015;2.21e-22;31!UBERON:0000383;2.21e-22;31!UBERON:0002204;6.83e-07;70 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001134,1.72e-11,62;UBERON:0002036,1.72e-11,62;UBERON:0003082,1.72e-11,62;UBERON:0002385,3.95e-11,64;UBERON:0001015,3.95e-11,64;UBERON:0000383,3.95e-11,64;UBERON:0002329,5.06e-10,71;UBERON:0003059,5.06e-10,71;UBERON:0007282,5.06e-10,71;UBERON:0004290,5.06e-10,71;UBERON:0009618,5.06e-10,71;UBERON:0003077,6.99e-10,72;UBERON:0007285,6.99e-10,72;UBERON:0007524,9.58e-10,73;UBERON:0007503,4.11e-09,78;UBERON:0000486,1.48e-08,83;UBERON:0005256,9.84e-08,122 | |||
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| ||
|short_description=p@chr7:81337867..81337871,+ | |short_description=p@chr7:81337867..81337871,+ | ||
}} | }} |
Latest revision as of 12:03, 31 July 2015
Short description: | p@chr7:81337867..81337871, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr7:81337867..81337871, + |
Coexpression cluster: | C2903_Skeletal_mesenchymal_glioma_Nucleus_large_sacrococcigeal_Smooth |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cell of skeletal muscle | 9.06e-79 | 9 |
skeletal muscle satellite cell | 9.99e-60 | 3 |
muscle cell | 5.81e-13 | 55 |
muscle precursor cell | 2.74e-12 | 58 |
myoblast | 2.74e-12 | 58 |
multi-potent skeletal muscle stem cell | 2.74e-12 | 58 |
electrically responsive cell | 1.11e-11 | 61 |
electrically active cell | 1.11e-11 | 61 |
Ontology term | p-value | n |
---|---|---|
skeletal muscle tissue | 1.72e-11 | 62 |
striated muscle tissue | 1.72e-11 | 62 |
myotome | 1.72e-11 | 62 |
muscle tissue | 3.95e-11 | 64 |
musculature | 3.95e-11 | 64 |
musculature of body | 3.95e-11 | 64 |
somite | 5.06e-10 | 71 |
presomitic mesoderm | 5.06e-10 | 71 |
presumptive segmental plate | 5.06e-10 | 71 |
dermomyotome | 5.06e-10 | 71 |
trunk paraxial mesoderm | 5.06e-10 | 71 |
paraxial mesoderm | 6.99e-10 | 72 |
presumptive paraxial mesoderm | 6.99e-10 | 72 |
dense mesenchyme tissue | 9.58e-10 | 73 |
epithelial vesicle | 4.11e-09 | 78 |
multilaminar epithelium | 1.48e-08 | 83 |
trunk mesenchyme | 9.84e-08 | 122 |
Ontology term | p-value | n |
---|---|---|
lung large cell carcinoma | 6.34e-08 | 3 |