FFCP PHASE1:Hg19::chr7:73483852..73483863,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr7:73483852..73483863,- | |||
|coexpression_cluster_id=C379 | |||
|description=CAGE_peak_at_chr7:73483852..73483863,- | |description=CAGE_peak_at_chr7:73483852..73483863,- | ||
|id=chr7:73483852..73483863,- | |id=chr7:73483852..73483863,- | ||
|ontology_enrichment_celltype=CL:0000057!1.39e-11!75;CL:0002334!5.09e-11!12;CL:0002615!1.86e-10!3;CL:0002580!5.62e-10!3;CL:0002579!2.92e-09!3;CL:0000136!4.87e-09!15;CL:0000153!2.30e-08!9;CL:0000447!2.30e-08!9;CL:0000055!6.76e-08!180;CL:0002617!2.62e-07!2;CL:0002620!9.55e-07!23 | |ontology_enrichment_celltype=CL:0000057!1.39e-11!75;CL:0002334!5.09e-11!12;CL:0002615!1.86e-10!3;CL:0002580!5.62e-10!3;CL:0002579!2.92e-09!3;CL:0000136!4.87e-09!15;CL:0000153!2.30e-08!9;CL:0000447!2.30e-08!9;CL:0000055!6.76e-08!180;CL:0002617!2.62e-07!2;CL:0002620!9.55e-07!23 | ||
|ontology_enrichment_celltype_v019=CL:0002615;1.67e-31;3!CL:0002617;9.50e-21;2!CL:0000136;2.06e-19;13!CL:0000135;3.61e-14;3!CL:0002580;3.61e-14;3!CL:0000214;3.61e-14;3!CL:0000388;3.61e-14;3!CL:0000153;1.29e-10;9!CL:0000447;1.29e-10;9!CL:0000499;8.31e-09;28!CL:0002620;4.22e-07;23 | |||
|ontology_enrichment_celltype_v019_2=CL:0002615,1.77e-31,3;CL:0002617,7.05e-21,2;CL:0000136,7.46e-17,15;CL:0002580,1.85e-14,3;CL:0000214,2.77e-14,3;CL:0000135,2.96e-14,3;CL:0000388,2.96e-14,3;CL:0000153,1.14e-10,9;CL:0000447,1.14e-10,9;CL:0000499,7.39e-09,28;CL:0000057,2.30e-07,76;CL:0002620,5.49e-07,23 | |||
|ontology_enrichment_development_v019=UBERON:0000358;9.07e-12;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004457!9.29e-19!12;UBERON:0000042!9.29e-19!12;UBERON:0003688!5.51e-18!6;UBERON:0002358!5.51e-18!6;UBERON:0003684!5.51e-18!6;UBERON:0001178!5.51e-18!6;UBERON:0001443!1.44e-09!11;UBERON:0000310!1.45e-07!10 | |||
|ontology_enrichment_uberon_v019=UBERON:0004457;4.83e-28;9!UBERON:0000042;4.83e-28;9!UBERON:0003688;4.39e-16;6!UBERON:0002358;4.39e-16;6!UBERON:0003684;4.39e-16;6!UBERON:0001178;4.39e-16;6!UBERON:0000310;4.49e-16;10!UBERON:0001443;1.23e-14;11!UBERON:0007846;3.61e-14;3!UBERON:0006915;3.61e-14;3!UBERON:0007616;3.61e-14;3!UBERON:0000043;3.61e-14;3!UBERON:0007845;3.61e-14;3!UBERON:0002217;3.61e-14;3!UBERON:0002018;3.61e-14;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004457,4.28e-21,12;UBERON:0000042,4.28e-21,12;UBERON:0000310,2.69e-16,10;UBERON:0003688,4.52e-16,6;UBERON:0002358,4.52e-16,6;UBERON:0003684,4.52e-16,6;UBERON:0001178,4.52e-16,6;UBERON:0001443,7.72e-15,11;UBERON:0006915,2.77e-14,3;UBERON:0007616,2.77e-14,3;UBERON:0002217,2.77e-14,3;UBERON:0002018,2.77e-14,3;UBERON:0007846,2.96e-14,3;UBERON:0000043,2.96e-14,3;UBERON:0007845,2.96e-14,3 | |||
|phase1_expression=1.2717486548939,1.49870366723688,2.81908808191942,2.00146596706261,4.46961094427288,0,0,0,0.261185628199839,0,0,0,0,0,0,0,0,0,0,0,0,0.626909442956176,0.286235987131057,0,0.251085279189606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.1686349143074,0,0.434539556882471,0,0.973269740605272,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,0.379891534993739,0,0.860509862246441,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.919463387397059,0.300476117813194,0,1.4351170855109,0.427114777637135,0,0,0,0.257640540045629,1.11670113798954,0,0.292311015483596,1.00973509697646,0,0,1.06502877754984,0,0.339121184620975,0,0,0,0,0,0,0,0,0,0,1.28648187638577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.718874566474748,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207970861530807,0.178428988797162,0.473107245101804,0,0.300946099727719,0,0,1.32845119707087,0,0,0,0.343143423810856,0,0,0,0,0,0,1.48864684691266,0.61384789315225,1.68396056659844,0.384417447767103,0.511707249066704,0.64341568457443,0,0,0.177561725313127,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.512900250232778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.356128142586949,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243713489631284,0,0,0,0,0,0.66343897524122,0,0,0,0,0,0,0,0,0,0,1.26664581178598,1.97576935775941,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0,0,0,0,0.796991953004279,0,0,0,0,0.622079175323615,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.802577647298789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0969890164884194,0,1.12990370390266,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.400027764663154,0.343395705182793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109209638192014,0.169732529954025,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.175871244359621,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.397901550322736,0,0,0,0,0,0.218559560503957,0,0,0,0,0,0.4226557275834,0.169927114687817,0,0.0644578879735772,0,0,0,0,0,0,0,0,0,0,0.5290268405154,1.48798007266701,0,1.29787968637137,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0.213233981900981,0.23806443146374,0,0.0620747142958579,0,0,0.202117188958219,0,0,0,0,0,0,0,0,0,4.69281884806909,0,0,0,0,0 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|phase1_expression=1.2717486548939,1.49870366723688,2.81908808191942,2.00146596706261,4.46961094427288,0,0,0,0.261185628199839,0,0,0,0,0,0,0,0,0,0,0,0,0.626909442956176,0.286235987131057,0,0.251085279189606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.1686349143074,0,0.434539556882471,0,0.973269740605272,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,0.379891534993739,0,0.860509862246441,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.919463387397059,0.300476117813194,0,1.4351170855109,0.427114777637135,0,0,0,0.257640540045629,1.11670113798954,0,0.292311015483596,1.00973509697646,0,0,1.06502877754984,0,0.339121184620975,0,0,0,0,0,0,0,0,0,0,1.28648187638577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.718874566474748,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207970861530807,0.178428988797162,0.473107245101804,0,0.300946099727719,0,0,1.32845119707087,0,0,0,0.343143423810856,0,0,0,0,0,0,1.48864684691266,0.61384789315225,1.68396056659844,0.384417447767103,0.511707249066704,0.64341568457443,0,0,0.177561725313127,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.512900250232778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.356128142586949,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243713489631284,0,0,0,0,0,0.66343897524122,0,0,0,0,0,0,0,0,0,0,1.26664581178598,1.97576935775941,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0,0,0,0,0.796991953004279,0,0,0,0,0.622079175323615,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.802577647298789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0969890164884194,0,1.12990370390266,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.400027764663154,0.343395705182793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109209638192014,0.169732529954025,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.175871244359621,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.397901550322736,0,0,0,0,0,0.218559560503957,0,0,0,0,0,0.4226557275834,0.169927114687817,0,0.0644578879735772,0,0,0,0,0,0,0,0,0,0,0.5290268405154,1.48798007266701,0,1.29787968637137,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0.213233981900981,0.23806443146374,0,0.0620747142958579,0,0,0.202117188958219,0,0,0,0,0,0,0,0,0,4.69281884806909,0,0,0,0,0 | ||
|short_description=p@chr7:73483852..73483863,- | |short_description=p@chr7:73483852..73483863,- | ||
}} | }} |
Latest revision as of 11:32, 31 July 2015
Short description: | p@chr7:73483852..73483863, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr7:73483852..73483863, - |
Coexpression cluster: | C379_Preadipocyte_Adipocyte_tenocyte_Chondrocyte_basal_aorta_trachea |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adipocyte of omentum tissue | 1.77e-31 | 3 |
adipocyte of breast | 7.05e-21 | 2 |
fat cell | 7.46e-17 | 15 |
preadipocyte of the breast | 1.85e-14 | 3 |
synovial cell | 2.77e-14 | 3 |
fibrocyte | 2.96e-14 | 3 |
tendon cell | 2.96e-14 | 3 |
GAG secreting cell | 1.14e-10 | 9 |
carbohydrate secreting cell | 1.14e-10 | 9 |
stromal cell | 7.39e-09 | 28 |
fibroblast | 2.30e-07 | 76 |
skin fibroblast | 5.49e-07 | 23 |
Ontology term | p-value | n |
---|---|---|
cavity lining | 4.28e-21 | 12 |
serous membrane | 4.28e-21 | 12 |
breast | 2.69e-16 | 10 |
omentum | 4.52e-16 | 6 |
peritoneum | 4.52e-16 | 6 |
abdominal cavity | 4.52e-16 | 6 |
visceral peritoneum | 4.52e-16 | 6 |
chest | 7.72e-15 | 11 |
stratified squamous epithelium | 2.77e-14 | 3 |
layer of synovial tissue | 2.77e-14 | 3 |
synovial joint | 2.77e-14 | 3 |
synovial membrane of synovial joint | 2.77e-14 | 3 |
dense regular connective tissue | 2.96e-14 | 3 |
tendon | 2.96e-14 | 3 |
regular connective tissue | 2.96e-14 | 3 |