FFCP PHASE1:Hg19::chr7:73470651..73470669,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr7:73470651..73470669,+
|short_description=p@chr7:73470651..73470669,+
|description=CAGE_peak_at_chr7:73470651..73470669,+
|association_with_transcript=NA
|E...") |
No edit summary |
||
(10 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr7:73470651..73470669,+ | |||
|coexpression_cluster_id=C379 | |||
|description=CAGE_peak_at_chr7:73470651..73470669,+ | |||
|id=chr7:73470651..73470669,+ | |||
|ontology_enrichment_celltype=CL:0000057!2.06e-12!75;CL:0000153!7.81e-09!9;CL:0000447!7.81e-09!9;CL:0000055!9.54e-09!180;CL:0002620!2.10e-08!23;CL:0002334!2.50e-08!12;CL:0000667!3.57e-07!6;CL:0000058!3.57e-07!6;CL:0000138!3.57e-07!6 | |||
|ontology_enrichment_celltype_v019=CL:0000153;1.34e-14;9!CL:0000447;1.34e-14;9!CL:0002615;2.20e-13;3!CL:0002580;4.19e-13;3!CL:0000135;3.22e-12;3!CL:0000388;3.22e-12;3!CL:0002334;1.42e-11;12!CL:0000136;3.92e-11;13!CL:0000138;3.17e-10;6!CL:0002617;1.90e-09;2!CL:0000499;2.15e-09;28!CL:0000327;1.66e-08;15 | |||
|ontology_enrichment_celltype_v019_2=CL:0000153,1.61e-14,9;CL:0000447,1.61e-14,9;CL:0002615,2.12e-13,3;CL:0002580,4.21e-13,3;CL:0000135,1.43e-12,3;CL:0000388,1.43e-12,3;CL:0000057,3.28e-12,76;CL:0002334,1.16e-11,12;CL:0000058,4.33e-10,6;CL:0000138,4.33e-10,6;CL:0000136,1.48e-09,15;CL:0000499,1.85e-09,28;CL:0002617,1.87e-09,2;CL:0000327,1.84e-08,15;CL:0000134,4.14e-07,354;CL:0002320,8.22e-07,361 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:17!3.69e-07!5;DOID:450!3.69e-07!5;DOID:66!3.69e-07!5;DOID:423!3.69e-07!5;DOID:0080000!3.69e-07!5;DOID:11722!3.69e-07!5 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003688!4.88e-11!6;UBERON:0002358!4.88e-11!6;UBERON:0003684!4.88e-11!6;UBERON:0001178!4.88e-11!6;UBERON:0004457!9.61e-11!12;UBERON:0000042!9.61e-11!12;UBERON:0002199!1.14e-07!45;UBERON:0002416!1.14e-07!45;UBERON:0002097!2.88e-07!40 | |||
|ontology_enrichment_uberon_v019=UBERON:0004457;5.72e-21;9!UBERON:0000042;5.72e-21;9!UBERON:0003688;6.61e-17;6!UBERON:0002358;6.61e-17;6!UBERON:0003684;6.61e-17;6!UBERON:0001178;6.61e-17;6!UBERON:0007846;3.22e-12;3!UBERON:0000043;3.22e-12;3!UBERON:0007845;3.22e-12;3!UBERON:0000310;3.14e-10;10!UBERON:0005406;2.15e-09;2!UBERON:0001443;2.90e-09;11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003688,4.73e-17,6;UBERON:0002358,4.73e-17,6;UBERON:0003684,4.73e-17,6;UBERON:0001178,4.73e-17,6;UBERON:0004457,1.28e-15,12;UBERON:0000042,1.28e-15,12;UBERON:0007846,1.43e-12,3;UBERON:0000043,1.43e-12,3;UBERON:0007845,1.43e-12,3;UBERON:0000310,3.12e-10,10;UBERON:0005406,2.03e-09,2;UBERON:0001443,2.89e-09,11;UBERON:0002384,5.12e-07,371 | |||
|phase1_expression=7.99384868790449,13.9165340529139,5.49722175974288,26.0190575718139,19.6662881548007,18.3191090061077,0,0,0.261185628199839,0,0,0,0,0,0,0,0,0,0,0.369363174230364,0,0.940364164434263,0,0.136874425072884,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.44575660953827,1.00267582127178,1.15877215168659,0.795285947051099,2.91980922181582,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.49091585508596,0.633152558322899,0,1.14734648299525,0,0,1.06748995729705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.7308685049499,0,0,0,0,0,0.438977620880838,6.43624371177941,3.00476117813194,0,0.89694817844431,0.213557388818567,0.211931901159562,0.600182192168805,0.206105058476878,1.03056216018252,0,0.337552664482532,1.07180705677318,0.757301322732344,0.184099797284599,0,2.13005755509969,1.61203357164224,0.67824236924195,0,0,0,0,0,0,0,0,0,1.56449532329816,1.28648187638577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.67737398844108,1.14861935834114,0,1.01346914667305,1.2328579353023,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03985430765404,0.892144943985809,0.630809660135739,0,0,4.5481500811197,1.03473071292505,0,0,0,0,0.343143423810856,0,0,0,0,0,0,2.48107807818777,7.366174717827,19.3655465158821,0.640695746278505,3.58195074346692,1.60853921143608,5.93672265779964,0,0.177561725313127,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.769350375349168,0,0.325378394664303,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0.356128142586949,0,0,0,0,0,0,0,0,0,0,0.55597265731176,0,0,0,0,0,0,0,0,0,0,0.117812402345686,0,0,0,0,0,0,0,0,0,0,1.32687795048244,0.438450885253763,0,0,0,0,0,0,0,0,0,1.47775344708365,2.30506425071931,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211673582723883,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0,0,0,0,1.19548792950642,0,0,0,0,4.0435146396035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.153900517007594,0,0,0,0,0,0,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0,0,0.995261931078505,0,1.83309043480088,0,0,0,0,0.802577647298789,0,0,0,0,0,0,0.30607276163049,0,0,0,0,0,0,0,0,0,0,0,0,0.52418000472609,0,0,0,0,0,0,1.35588444468319,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279282401272254,0.458320848023367,0,0.399358000997982,0,0,0.604651252380536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0607495566580247,0,0,0.209818352539992,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.10043013569766,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.298509605773748,0.233713309847224,0,0,0,0,0,0,0.310874401165561,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.200360940621,0.343395705182793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.107824811396682,0,0,0.169732529954025,0.212574920101683,0.123935764259002,0,0.636008701306837,0,0,1.41070377476274,0,0,0,0,0.205116364240755,0,0,0.161475645631851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.546974809018219,0,0.496211178389294,0.175871244359621,0,0,0,0,0,0.177404740325278,0,0,0,0,0,0,0,0,0,0,0,0,0.0714765441766563,0,0,0,0,0.414432328326074,0,0,0,0,0,0.846774100381858,0,0,0,0,0,0,0,0.102662806856247,0,3.88568794447312,0,0.198950775161368,0,0,0,0,0,0.655678681511872,0,0.490296643507811,0,0,0,2.113278637917,0.679708458751268,0,0.322289439867886,0,0,0,0,1.46067277649303,0.458729283404541,0,0,0,0,1.0580536810308,1.48798007266701,1.84870251452567,9.08515780459957,0,0,0,0,0,0,0,0.0757786982182394,0.267964130156178,0,0,0,0.714193294391221,0,0.124149428591716,0,0.0636471582781649,0.202117188958219,0.217716747896961,0.684466602170562,0.0673520530145875,0.215166616178029,5.32256570473621,0,0,0,0,0,0,0.813792356631477,0,0.402547587182052,0 | |phase1_expression=7.99384868790449,13.9165340529139,5.49722175974288,26.0190575718139,19.6662881548007,18.3191090061077,0,0,0.261185628199839,0,0,0,0,0,0,0,0,0,0,0.369363174230364,0,0.940364164434263,0,0.136874425072884,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.44575660953827,1.00267582127178,1.15877215168659,0.795285947051099,2.91980922181582,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.49091585508596,0.633152558322899,0,1.14734648299525,0,0,1.06748995729705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.7308685049499,0,0,0,0,0,0.438977620880838,6.43624371177941,3.00476117813194,0,0.89694817844431,0.213557388818567,0.211931901159562,0.600182192168805,0.206105058476878,1.03056216018252,0,0.337552664482532,1.07180705677318,0.757301322732344,0.184099797284599,0,2.13005755509969,1.61203357164224,0.67824236924195,0,0,0,0,0,0,0,0,0,1.56449532329816,1.28648187638577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.67737398844108,1.14861935834114,0,1.01346914667305,1.2328579353023,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03985430765404,0.892144943985809,0.630809660135739,0,0,4.5481500811197,1.03473071292505,0,0,0,0,0.343143423810856,0,0,0,0,0,0,2.48107807818777,7.366174717827,19.3655465158821,0.640695746278505,3.58195074346692,1.60853921143608,5.93672265779964,0,0.177561725313127,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.769350375349168,0,0.325378394664303,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0.356128142586949,0,0,0,0,0,0,0,0,0,0,0.55597265731176,0,0,0,0,0,0,0,0,0,0,0.117812402345686,0,0,0,0,0,0,0,0,0,0,1.32687795048244,0.438450885253763,0,0,0,0,0,0,0,0,0,1.47775344708365,2.30506425071931,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211673582723883,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0,0,0,0,1.19548792950642,0,0,0,0,4.0435146396035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.153900517007594,0,0,0,0,0,0,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0,0,0.995261931078505,0,1.83309043480088,0,0,0,0,0.802577647298789,0,0,0,0,0,0,0.30607276163049,0,0,0,0,0,0,0,0,0,0,0,0,0.52418000472609,0,0,0,0,0,0,1.35588444468319,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279282401272254,0.458320848023367,0,0.399358000997982,0,0,0.604651252380536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0607495566580247,0,0,0.209818352539992,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.10043013569766,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.298509605773748,0.233713309847224,0,0,0,0,0,0,0.310874401165561,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.200360940621,0.343395705182793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.107824811396682,0,0,0.169732529954025,0.212574920101683,0.123935764259002,0,0.636008701306837,0,0,1.41070377476274,0,0,0,0,0.205116364240755,0,0,0.161475645631851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.546974809018219,0,0.496211178389294,0.175871244359621,0,0,0,0,0,0.177404740325278,0,0,0,0,0,0,0,0,0,0,0,0,0.0714765441766563,0,0,0,0,0.414432328326074,0,0,0,0,0,0.846774100381858,0,0,0,0,0,0,0,0.102662806856247,0,3.88568794447312,0,0.198950775161368,0,0,0,0,0,0.655678681511872,0,0.490296643507811,0,0,0,2.113278637917,0.679708458751268,0,0.322289439867886,0,0,0,0,1.46067277649303,0.458729283404541,0,0,0,0,1.0580536810308,1.48798007266701,1.84870251452567,9.08515780459957,0,0,0,0,0,0,0,0.0757786982182394,0.267964130156178,0,0,0,0.714193294391221,0,0.124149428591716,0,0.0636471582781649,0.202117188958219,0.217716747896961,0.684466602170562,0.0673520530145875,0.215166616178029,5.32256570473621,0,0,0,0,0,0,0.813792356631477,0,0.402547587182052,0 | ||
|short_description=p@chr7:73470651..73470669,+ | |||
}} | }} |
Latest revision as of 11:31, 31 July 2015
Short description: | p@chr7:73470651..73470669, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr7:73470651..73470669, + |
Coexpression cluster: | C379_Preadipocyte_Adipocyte_tenocyte_Chondrocyte_basal_aorta_trachea |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
GAG secreting cell | 1.61e-14 | 9 |
carbohydrate secreting cell | 1.61e-14 | 9 |
adipocyte of omentum tissue | 2.12e-13 | 3 |
preadipocyte of the breast | 4.21e-13 | 3 |
fibrocyte | 1.43e-12 | 3 |
tendon cell | 1.43e-12 | 3 |
fibroblast | 3.28e-12 | 76 |
preadipocyte | 1.16e-11 | 12 |
chondroblast | 4.33e-10 | 6 |
chondrocyte | 4.33e-10 | 6 |
fat cell | 1.48e-09 | 15 |
stromal cell | 1.85e-09 | 28 |
adipocyte of breast | 1.87e-09 | 2 |
extracellular matrix secreting cell | 1.84e-08 | 15 |
mesenchymal cell | 4.14e-07 | 354 |
connective tissue cell | 8.22e-07 | 361 |
Ontology term | p-value | n |
---|---|---|
omentum | 4.73e-17 | 6 |
peritoneum | 4.73e-17 | 6 |
abdominal cavity | 4.73e-17 | 6 |
visceral peritoneum | 4.73e-17 | 6 |
cavity lining | 1.28e-15 | 12 |
serous membrane | 1.28e-15 | 12 |
dense regular connective tissue | 1.43e-12 | 3 |
tendon | 1.43e-12 | 3 |
regular connective tissue | 1.43e-12 | 3 |
breast | 3.12e-10 | 10 |
perirenal fat | 2.03e-09 | 2 |
chest | 2.89e-09 | 11 |
connective tissue | 5.12e-07 | 371 |