FFCP PHASE1:Hg19::chr7:46823014..46823017,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr7:46823014..46823017,- | |||
|description=CAGE_peak_at_chr7:46823014..46823017,- | |description=CAGE_peak_at_chr7:46823014..46823017,- | ||
|id=chr7:46823014..46823017,- | |id=chr7:46823014..46823017,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0002178;1.50e-14;3!CL:0000322;1.96e-14;3!CL:0000082;2.36e-09;19!CL:0002251;6.17e-09;20!CL:0002076;2.78e-07;42 | |||
|ontology_enrichment_celltype_v019_2=CL:0002178,1.40e-14,3;CL:0000322,1.83e-14,3;CL:0000082,2.36e-09,19;CL:0002076,2.82e-09,42;CL:0002251,6.17e-09,20;CL:0000223,6.40e-07,58 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:305!1.03e-10!106;DOID:1749!7.78e-07!14 | |||
|ontology_enrichment_disease_v019=DOID:3910;6.30e-21;2!DOID:1749;2.06e-12;14!DOID:1324;1.42e-11;15!DOID:0050615;6.45e-11;16!DOID:3908;3.35e-09;5!DOID:1325;6.21e-07;7!DOID:3904;6.21e-07;7!DOID:305;6.90e-07;106 | |||
|ontology_enrichment_disease_v019_2=DOID:3910,5.70e-21,2;DOID:1749,2.12e-12,14;DOID:1324,1.42e-11,15;DOID:0050615,6.45e-11,16;DOID:305,5.66e-10,106;DOID:3908,3.22e-09,5;DOID:0050687,1.55e-07,143;DOID:1325,6.04e-07,7;DOID:3904,6.04e-07,7 | |||
|ontology_enrichment_uberon=UBERON:0003127!1.61e-08!2 | |||
|ontology_enrichment_uberon_v019=UBERON:0006562;6.30e-21;2!UBERON:0004903;6.30e-21;2!UBERON:0002173;6.30e-21;2!UBERON:0002186;6.30e-21;2!UBERON:0004821;1.96e-14;3!UBERON:0007499;1.96e-14;3!UBERON:0003215;1.96e-14;3!UBERON:0010368;1.96e-14;3!UBERON:0009911;1.96e-14;3!UBERON:0002299;1.96e-14;3!UBERON:0006524;1.96e-14;3!UBERON:0008874;1.96e-14;3!UBERON:0002169;1.96e-14;3!UBERON:0004894;1.96e-14;3!UBERON:0009856;3.60e-11;4!UBERON:0004802;2.36e-09;19!UBERON:0000115;2.36e-09;19!UBERON:0000945;2.86e-09;5!UBERON:0010039;2.86e-09;5!UBERON:0002048;3.27e-08;22!UBERON:0004807;3.27e-08;22!UBERON:0000117;3.27e-08;22!UBERON:0000171;3.27e-08;22!UBERON:0000170;3.27e-08;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004903,5.70e-21,2;UBERON:0002173,5.70e-21,2;UBERON:0002186,5.70e-21,2;UBERON:0004821,1.83e-14,3;UBERON:0003215,1.83e-14,3;UBERON:0010368,1.83e-14,3;UBERON:0009911,1.83e-14,3;UBERON:0002299,1.83e-14,3;UBERON:0006524,1.83e-14,3;UBERON:0008874,1.83e-14,3;UBERON:0002169,1.83e-14,3;UBERON:0004894,1.83e-14,3;UBERON:0004802,2.36e-09,19;UBERON:0000115,2.36e-09,19;UBERON:0002048,3.27e-08,22;UBERON:0000117,3.27e-08,22;UBERON:0000171,3.27e-08,22;UBERON:0000170,3.27e-08,22;UBERON:0005597,3.27e-08,22;UBERON:0000118,3.27e-08,22 | |||
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| ||
|short_description=p@chr7:46823014..46823017,- | |short_description=p@chr7:46823014..46823017,- | ||
}} | }} |
Latest revision as of 10:28, 31 July 2015
Short description: | p@chr7:46823014..46823017, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr7:46823014..46823017, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of stomach | 1.40e-14 | 3 |
pneumocyte | 1.83e-14 | 3 |
epithelial cell of lung | 2.36e-09 | 19 |
endo-epithelial cell | 2.82e-09 | 42 |
epithelial cell of alimentary canal | 6.17e-09 | 20 |
endodermal cell | 6.40e-07 | 58 |
Ontology term | p-value | n |
---|---|---|
bronchoalveolar duct junction | 5.70e-21 | 2 |
alveolar duct | 5.70e-21 | 2 |
bronchiole | 5.70e-21 | 2 |
pulmonary alveolus epithelium | 1.83e-14 | 3 |
alveolus | 1.83e-14 | 3 |
pulmonary lobule | 1.83e-14 | 3 |
lobule | 1.83e-14 | 3 |
alveolus of lung | 1.83e-14 | 3 |
alveolar system | 1.83e-14 | 3 |
pulmonary acinus | 1.83e-14 | 3 |
alveolar sac | 1.83e-14 | 3 |
alveolar wall | 1.83e-14 | 3 |
respiratory tract epithelium | 2.36e-09 | 19 |
lung epithelium | 2.36e-09 | 19 |
lung | 3.27e-08 | 22 |
respiratory tube | 3.27e-08 | 22 |
respiration organ | 3.27e-08 | 22 |
pair of lungs | 3.27e-08 | 22 |
lung primordium | 3.27e-08 | 22 |
lung bud | 3.27e-08 | 22 |
Ontology term | p-value | n |
---|---|---|
lung adenocarcinoma | 5.70e-21 | 2 |
squamous cell carcinoma | 2.12e-12 | 14 |
lung cancer | 1.42e-11 | 15 |
respiratory system cancer | 6.45e-11 | 16 |
carcinoma | 5.66e-10 | 106 |
non-small cell lung carcinoma | 3.22e-09 | 5 |
cell type cancer | 1.55e-07 | 143 |
bronchus cancer | 6.04e-07 | 7 |
bronchogenic carcinoma | 6.04e-07 | 7 |