FFCP PHASE1:Hg19::chr7:148133811..148133845,-: Difference between revisions
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|id=chr7:148133811..148133845,-
|short_description=p@chr7:148133811..148133845,-
|description=CAGE_peak_at_chr7:148133811..148133845,-
|association_with_transcript=...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr7:148133811..148133845,- | |||
|coexpression_cluster_id=C2250 | |||
|description=CAGE_peak_at_chr7:148133811..148133845,- | |||
|id=chr7:148133811..148133845,- | |||
|ontology_enrichment_celltype=CL:0000236!2.53e-43!14;CL:0000945!1.87e-42!24;CL:0000826!1.87e-42!24;CL:0000542!4.48e-22!53;CL:0000051!4.48e-22!53;CL:0000838!4.95e-20!52;CL:0000784!9.49e-13!3;CL:0002087!1.37e-10!119;CL:0000738!2.27e-10!140;CL:0000037!1.71e-07!172;CL:0000566!1.71e-07!172;CL:0002031!6.23e-07!124;CL:0000988!8.26e-07!182 | |||
|ontology_enrichment_celltype_v019=CL:0000236;7.65e-88;13!CL:0000945;7.21e-55;24!CL:0000542;3.05e-22;53!CL:0000785;1.49e-09;1!CL:0000819;1.49e-09;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000236,1.96e-81,14;CL:0000945,7.21e-55,24;CL:0000826,7.21e-55,24;CL:0000838,3.30e-28,52;CL:0000542,1.25e-27,53;CL:0000051,1.25e-27,53;CL:0002087,2.95e-11,115;CL:0002031,1.10e-10,120;CL:0000819,1.43e-09,1;CL:0000738,3.84e-09,136;CL:0002032,2.42e-07,161;CL:0000837,2.42e-07,161;CL:0000037,6.19e-07,168 | |||
|ontology_enrichment_development_v019=CL:0000051;3.05e-22;53!UBERON:0001045;4.32e-09;1!UBERON:0005425;4.32e-09;1!UBERON:0004161;6.11e-07;11 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:0060073;1.49e-09;1!DOID:8675;1.49e-09;1!DOID:0060058;5.79e-08;10 | |||
|ontology_enrichment_disease_v019_2=DOID:0060073,1.43e-09,1;DOID:8675,1.43e-09,1;DOID:0060058,5.72e-08,10 | |||
|ontology_enrichment_uberon=UBERON:0000178!1.03e-12!15;UBERON:0000179!1.03e-12!15;UBERON:0000463!1.03e-12!15;UBERON:0001155!2.84e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0002372;4.32e-09;1!UBERON:0001154;4.32e-09;1!UBERON:0000941;4.32e-09;1!UBERON:0001153;4.32e-09;1!UBERON:0001785;4.32e-09;1!UBERON:0002464;4.32e-09;1!UBERON:0004904;4.32e-09;1!UBERON:0009854;4.32e-09;1!UBERON:0001961;4.32e-09;1!UBERON:0001021;4.32e-09;1!UBERON:0001744;4.32e-09;1!UBERON:0001042;4.32e-09;1!UBERON:0001735;4.32e-09;1!UBERON:0000178;1.59e-08;15!UBERON:0000179;1.59e-08;15!UBERON:0000463;1.59e-08;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000941,4.50e-09,1;UBERON:0001785,4.50e-09,1;UBERON:0002464,4.50e-09,1;UBERON:0004904,4.50e-09,1;UBERON:0001021,4.50e-09,1;UBERON:0003902,4.50e-09,1;UBERON:0005425,4.50e-09,1;UBERON:0002372,4.87e-09,1;UBERON:0001961,4.87e-09,1;UBERON:0001744,4.87e-09,1;UBERON:0001735,4.87e-09,1;UBERON:0001154,5.28e-09,1;UBERON:0001153,5.28e-09,1;UBERON:0001045,5.28e-09,1;UBERON:0000178,1.56e-08,15;UBERON:0000179,1.56e-08,15;UBERON:0000463,1.56e-08,15 | |||
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| ||
|short_description=p@chr7:148133811..148133845,- | |||
}} | }} |
Latest revision as of 07:12, 31 July 2015
Short description: | p@chr7:148133811..148133845, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr7:148133811..148133845, - |
Coexpression cluster: | C2250_adult_CD19_lymphangiectasia_diffuse_lymphoma_tonsil_Whole |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
B cell | 1.96e-81 | 14 |
lymphocyte of B lineage | 7.21e-55 | 24 |
pro-B cell | 7.21e-55 | 24 |
lymphoid lineage restricted progenitor cell | 3.30e-28 | 52 |
lymphocyte | 1.25e-27 | 53 |
common lymphoid progenitor | 1.25e-27 | 53 |
nongranular leukocyte | 2.95e-11 | 115 |
hematopoietic lineage restricted progenitor cell | 1.10e-10 | 120 |
B-1 B cell | 1.43e-09 | 1 |
leukocyte | 3.84e-09 | 136 |
hematopoietic oligopotent progenitor cell | 2.42e-07 | 161 |
hematopoietic multipotent progenitor cell | 2.42e-07 | 161 |
hematopoietic stem cell | 6.19e-07 | 168 |
Ontology term | p-value | n |
---|---|---|
cranial nerve II | 4.50e-09 | 1 |
cranial nerve | 4.50e-09 | 1 |
nerve trunk | 4.50e-09 | 1 |
nerve connecting eye with brain | 4.50e-09 | 1 |
nerve | 4.50e-09 | 1 |
retinal neural layer | 4.50e-09 | 1 |
presumptive neural retina | 4.50e-09 | 1 |
tonsil | 4.87e-09 | 1 |
mucosa-associated lymphoid tissue | 4.87e-09 | 1 |
lymphoid tissue | 4.87e-09 | 1 |
tonsillar ring | 4.87e-09 | 1 |
vermiform appendix | 5.28e-09 | 1 |
caecum | 5.28e-09 | 1 |
midgut | 5.28e-09 | 1 |
blood | 1.56e-08 | 15 |
haemolymphatic fluid | 1.56e-08 | 15 |
organism substance | 1.56e-08 | 15 |
Ontology term | p-value | n |
---|---|---|
lymphatic system cancer | 1.43e-09 | 1 |
lymphosarcoma | 1.43e-09 | 1 |
lymphoma | 5.72e-08 | 10 |