FFCP PHASE1:Hg19::chr7:142511881..142511883,+: Difference between revisions
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|id=chr7:142511881..142511883,+
|short_description=p@chr7:142511881..142511883,+
|description=CAGE_peak_at_chr7:142511881..142511883,+
|association_with_transcript=...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr7:142511881..142511883,+ | |||
|coexpression_cluster_id=C1121 | |||
|description=CAGE_peak_at_chr7:142511881..142511883,+ | |||
|id=chr7:142511881..142511883,+ | |||
|ontology_enrichment_celltype=CL:0000542!1.93e-41!53;CL:0000051!1.93e-41!53;CL:0000838!3.31e-40!52;CL:0000084!6.19e-23!25;CL:0000827!6.19e-23!25;CL:0002087!1.27e-20!119;CL:0000738!3.72e-18!140;CL:0000988!5.12e-18!182;CL:0002031!7.45e-18!124;CL:0000037!3.50e-17!172;CL:0000566!3.50e-17!172;CL:0000791!1.67e-16!18;CL:0000789!1.67e-16!18;CL:0002420!1.67e-16!18;CL:0002419!1.67e-16!18;CL:0000790!1.67e-16!18;CL:0002032!7.42e-15!165;CL:0000837!7.42e-15!165;CL:0000945!2.56e-14!24;CL:0000826!2.56e-14!24;CL:0000236!5.62e-12!14;CL:0000080!1.22e-10!6;CL:0000625!2.90e-09!11;CL:0000624!1.03e-07!6 | |||
|ontology_enrichment_celltype_v019=CL:0000084;6.98e-19;25!CL:0000791;7.21e-18;18!CL:0000789;7.21e-18;18!CL:0002419;7.21e-18;18!CL:0000542;1.41e-15;53!CL:0000623;2.10e-13;3!CL:0000226;6.13e-13;3!CL:0000842;6.13e-13;3!CL:0000624;5.67e-12;6!CL:0000236;7.91e-11;13!CL:0000625;1.68e-09;11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000838,6.28e-28,52;CL:0000542,2.61e-27,53;CL:0000051,2.61e-27,53;CL:0000084,5.90e-19,25;CL:0000827,5.90e-19,25;CL:0000791,5.84e-18,18;CL:0000789,5.84e-18,18;CL:0002420,5.84e-18,18;CL:0002419,5.84e-18,18;CL:0000790,5.84e-18,18;CL:0002087,3.55e-15,115;CL:0000623,1.77e-13,3;CL:0000825,1.77e-13,3;CL:0000738,2.46e-13,136;CL:0000226,5.54e-13,3;CL:0000842,5.54e-13,3;CL:0000988,5.20e-12,177;CL:0000624,6.01e-12,6;CL:0002031,2.00e-10,120;CL:0000236,6.14e-10,14;CL:0000037,1.00e-09,168;CL:0000625,1.33e-09,11 | |||
|ontology_enrichment_development_v019=CL:0000790;7.21e-18;18!CL:0000051;1.41e-15;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000178!9.39e-12!15;UBERON:0000179!9.39e-12!15;UBERON:0000463!9.39e-12!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;3.59e-16;15!UBERON:0000179;3.59e-16;15!UBERON:0000463;3.59e-16;15!UBERON:0002390;7.84e-11;32!UBERON:0002370;2.67e-10;2!UBERON:0005058;2.67e-10;2!UBERON:0009113;2.67e-10;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,2.85e-16,15;UBERON:0000179,2.85e-16,15;UBERON:0000463,2.85e-16,15 | |||
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| ||
|short_description=p@chr7:142511881..142511883,+ | |||
}} | }} |
Latest revision as of 07:00, 31 July 2015
Short description: | p@chr7:142511881..142511883, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr7:142511881..142511883, + |
Coexpression cluster: | C1121_Hodgkin_CD4_acute_CD8_thymus_Natural_chronic |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphoid lineage restricted progenitor cell | 6.28e-28 | 52 |
lymphocyte | 2.61e-27 | 53 |
common lymphoid progenitor | 2.61e-27 | 53 |
T cell | 5.90e-19 | 25 |
pro-T cell | 5.90e-19 | 25 |
mature alpha-beta T cell | 5.84e-18 | 18 |
alpha-beta T cell | 5.84e-18 | 18 |
immature T cell | 5.84e-18 | 18 |
mature T cell | 5.84e-18 | 18 |
immature alpha-beta T cell | 5.84e-18 | 18 |
nongranular leukocyte | 3.55e-15 | 115 |
natural killer cell | 1.77e-13 | 3 |
pro-NK cell | 1.77e-13 | 3 |
leukocyte | 2.46e-13 | 136 |
single nucleate cell | 5.54e-13 | 3 |
mononuclear cell | 5.54e-13 | 3 |
hematopoietic cell | 5.20e-12 | 177 |
CD4-positive, alpha-beta T cell | 6.01e-12 | 6 |
hematopoietic lineage restricted progenitor cell | 2.00e-10 | 120 |
B cell | 6.14e-10 | 14 |
hematopoietic stem cell | 1.00e-09 | 168 |
CD8-positive, alpha-beta T cell | 1.33e-09 | 11 |
Ontology term | p-value | n |
---|---|---|
blood | 2.85e-16 | 15 |
haemolymphatic fluid | 2.85e-16 | 15 |
organism substance | 2.85e-16 | 15 |