FFCP PHASE1:Hg19::chr7:142494463..142494479,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr7:142494463..142494479,+ | |||
|coexpression_cluster_id=C861 | |coexpression_cluster_id=C861 | ||
|description=CAGE_peak_at_chr7:142494463..142494479,+ | |description=CAGE_peak_at_chr7:142494463..142494479,+ | ||
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|ontology_enrichment_celltype=CL:0000542!8.49e-30!53;CL:0000051!8.49e-30!53;CL:0000838!7.96e-29!52;CL:0000084!2.77e-18!25;CL:0000827!2.77e-18!25;CL:0000791!4.98e-17!18;CL:0000789!4.98e-17!18;CL:0002420!4.98e-17!18;CL:0002419!4.98e-17!18;CL:0000790!4.98e-17!18;CL:0000236!3.60e-12!14;CL:0002087!1.91e-11!119;CL:0000625!2.66e-11!11;CL:0000738!3.96e-10!140;CL:0000945!1.58e-09!24;CL:0000826!1.58e-09!24;CL:0002031!3.46e-08!124;CL:0000037!2.40e-07!172;CL:0000566!2.40e-07!172;CL:0000988!5.14e-07!182 | |ontology_enrichment_celltype=CL:0000542!8.49e-30!53;CL:0000051!8.49e-30!53;CL:0000838!7.96e-29!52;CL:0000084!2.77e-18!25;CL:0000827!2.77e-18!25;CL:0000791!4.98e-17!18;CL:0000789!4.98e-17!18;CL:0002420!4.98e-17!18;CL:0002419!4.98e-17!18;CL:0000790!4.98e-17!18;CL:0000236!3.60e-12!14;CL:0002087!1.91e-11!119;CL:0000625!2.66e-11!11;CL:0000738!3.96e-10!140;CL:0000945!1.58e-09!24;CL:0000826!1.58e-09!24;CL:0002031!3.46e-08!124;CL:0000037!2.40e-07!172;CL:0000566!2.40e-07!172;CL:0000988!5.14e-07!182 | ||
|ontology_enrichment_celltype_v019=CL:0000084;1.20e-29;25!CL:0000791;6.84e-29;18!CL:0000789;6.84e-29;18!CL:0002419;6.84e-29;18!CL:0000542;6.96e-28;53!CL:0000625;7.18e-19;11!CL:0000236;1.19e-16;13!CL:0000945;2.98e-14;24!CL:0000624;7.64e-10;6!CL:0000623;6.87e-07;3 | |ontology_enrichment_celltype_v019=CL:0000084;1.20e-29;25!CL:0000791;6.84e-29;18!CL:0000789;6.84e-29;18!CL:0002419;6.84e-29;18!CL:0000542;6.96e-28;53!CL:0000625;7.18e-19;11!CL:0000236;1.19e-16;13!CL:0000945;2.98e-14;24!CL:0000624;7.64e-10;6!CL:0000623;6.87e-07;3 | ||
|ontology_enrichment_celltype_v019_2=CL:0000542,2.86e-48,53;CL:0000051,2.86e-48,53;CL:0000838,1.39e-46,52;CL:0000084,1.84e-29,25;CL:0000827,1.84e-29,25;CL:0000791,1.15e-28,18;CL:0000789,1.15e-28,18;CL:0002420,1.15e-28,18;CL:0002419,1.15e-28,18;CL:0000790,1.15e-28,18;CL:0002087,4.64e-20,115;CL:0000625,1.31e-18,11;CL:0000236,3.63e-18,14;CL:0000738,1.05e-16,136;CL:0002031,1.56e-14,120;CL:0000945,2.88e-14,24;CL:0000826,2.88e-14,24;CL:0000037,4.09e-13,168;CL:0000988,9.22e-12,177;CL:0002032,2.92e-11,161;CL:0000837,2.92e-11,161;CL:0000624,7.11e-10,6;CL:0000623,6.42e-07,3;CL:0000825,6.42e-07,3 | |||
|ontology_enrichment_development_v019=CL:0000790;6.84e-29;18!CL:0000051;6.96e-28;53 | |ontology_enrichment_development_v019=CL:0000790;6.84e-29;18!CL:0000051;6.96e-28;53 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000178!2.95e-08!15;UBERON:0000179!2.95e-08!15;UBERON:0000463!2.95e-08!15 | |ontology_enrichment_uberon=UBERON:0000178!2.95e-08!15;UBERON:0000179!2.95e-08!15;UBERON:0000463!2.95e-08!15 | ||
|ontology_enrichment_uberon_v019=UBERON:0000178;2.25e-14;15!UBERON:0000179;2.25e-14;15!UBERON:0000463;2.25e-14;15!UBERON:0002390;1.02e-08;32!UBERON:0002193;3.76e-08;42 | |ontology_enrichment_uberon_v019=UBERON:0000178;2.25e-14;15!UBERON:0000179;2.25e-14;15!UBERON:0000463;2.25e-14;15!UBERON:0002390;1.02e-08;32!UBERON:0002193;3.76e-08;42 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,2.25e-14,15;UBERON:0000179,2.25e-14,15;UBERON:0000463,2.25e-14,15;UBERON:0002370,4.17e-07,4;UBERON:0005058,4.17e-07,4;UBERON:0009113,4.17e-07,4;UBERON:0003295,4.17e-07,4;UBERON:0005562,4.17e-07,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,1.47440361900905,2.79120467188971,3.71350332621293,1.84636884759917,0,0,0,0,0,0,0.246242116153576,1.63200552995402,0,0,0,0.125542639594803,1.06978768047132,0.903106483949403,1.57421562627358,1.57345710739562,0.767658796194425,2.01260960310899,0,0,0,0,4.26507697462265,1.46800219667424,1.10799081706375,1.60435557976113,0.651032612147555,0,0.32389366601898,0,0,0,0,0,0,0.309706370895104,0.28769239232215,0.256160706529101,0,0,0,0,0.188242339542605,0,0,0,0.962787081228281,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,3.51992488922645,6.55366333514558,7.11607403090844,8.96133467389665,6.00593980554019,8.04653415936277,7.93253847341835,8.58648379081828,0.569212969109448,3.52342313622563,1.91136614062614,1.32171328579026,3.92355994087075,1.31692042387539,1.180258620683,1.96505381374582,1.43921049299656,4.51403537554831,5.21475626613745,3.31413464014313,3.89653456815823,3.45372416344038,4.12448270464772,2.43687284041983,2.97884250141517,2.68991771423918,2.86130564631732,2.79544437826249,3.59255023121603,4.63684937176084,2.66915813691709,2.1403266247177,4.18142095219907,2.26618685395132,2.68254345521345,2.74901956386104,3.79529538029254,6.05274287215784,4.55758417699493,8.55406840003537,3.16207750063323,3.71161172347813,3.74792179657038,3.55165878066025,3.28451198768419,2.01606743224732,2.13952156626806,1.59306844271079,0,0,0,0,0,0,0,0,0.0945348171640679,0,0.614843499851882,0.130979075497713,0,0,0,0.348259474598534,0,0,0.571994910780128,0,1.19257444420023,0,1.04142150482278,2.26123176769604,1.67799774483962,0.275118041940067,0.626984899610432,0,0,0,0,0,0,1.47065232138347,0,0.535798369704479,0.44905874525234,0.337834441449967,1.53316637465883,3.79706263827252,0.916008719652036,0,0,0,0,1.51956613997496,0.132409180813219,0,1.41867352879343,0,0,0,0.311211035399766,0,0.163461903113459,0.302714855289863,0.576175924479999,0.234321431833797,0,0,0,0,0.161872944368132,0,0,0,0,0,0,1.82032272387605,3.59309070908119,0,0,0,0,0,0,0.340296549480063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169560592310488,0,0,0,0,0,0.116193942869518,0,0,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.651616610620649,2.07986957055916,2.88662684050547,0,0.469634776943287,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207328115540772,0,0,0,0,0,0,0,0,0,0,0,0,0.646358578788889,0,0,0.797814349754612,0,0,0,0,0,2.71310802695722,0,0,0,0,0,0,0,0,0,0,0.239624855491583,0,0,0,0,0,7.17344921558575,5.51686128565396,4.52817907204986,6.67383788654692,0.254094624222463,0,0.773288812777695,1.00509759200609,0,0,0,0.414415513436035,0,0,0,0,0,0,0,0,0,0,0,0.184369168541703,0.0868836144680828,0.587403472388222,0,2.27444828735176,1.94142780736755,2.56146138728266,0.303127571446259,1.66435439510497,2.72151263996712,0,0,0,0,0,0,0,0.462629081407967,0,0.0821271560138091,0.519254429183621,0,0,0,0,0.918515585316854,0.364182336013434,0.131124414959424,0,0.0770153371044148,0,1.46139224653261,0,0,0,0.215915916102139,0,0.270946437543853,0,0,0,0.223874754722178,0,0,0,0,0,0.206082023295445,0,0,0,0,0,0,0,0.15350367472613,0.137836572484531,0,0,0,0,0.165284915360978,0.192190067365106,0,0,0,0,0,0,1.59691809095107,0,0,0.429374660225974,0.372158369359667,1.2655176988749,0,0.767693373934002,0,0.318203247925937,0,0,0,0.353437207037059,1.2130948894399,0,0,0,0,0,0.545999645631943,0.141405431953713,0,0,0,0,0.578775534266688,0,0,0,1.40847801266121,1.86434757865267,0.88424136911809,0,0,0,0,1.89736586882858,1.04980416073495,0,0,0,0.0941438007767792,0,0,0,0.229723400206959,2.53723804616085,3.82318603571188,2.27858874869665,2.38231775457789,2.05681136543097,5.18778648954174,2.70015718619057,2.37937552888281,0,0,0,5.38829207864584,0,0,1.4348364545594,0.199579371432817,2.48956981172077,0,0,0,0,0,0,0.338583555603207,0,0,0,0,0,0,0,0,1.11362469558097,0,0,0,0,0,0.146508179271894,0,2.22886768554957,0,0,0,0,0,0,0,0.494411622680279,0,0.19924798825107,1.10513566212459,0,0.102268682502155,0,0,0,0,0,0,2.3948309234694,0,0,0.185536196323703,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110579259931225,0,0.438770794307945,0,0,0.153900517007594,0,0,0,0,0,0.274792780205587,0,6.13159789174419,0,0,0,0,0,0,0,0,0,0,0,0,0.176915129006678,0,0,0,0,0.134802265961354,0,0.702793337176017,3.46664099509765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.137041924646751,0,0.443175571691151,0,0,0.213452994739353,0.19980960958213,0,0,0,1.00838358591705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.446342914883745,0,0,0,0,0,0,0,0,0,0,0.321506296930038,0.275078873194468,0,0,0,0.546746009922222,0,0.157611414598396,0,0,0,0,0,0,0,0.542999601753713,0,0,0,0.164185041498678,0,0,0.146552233678082,0,0,0,0,0,0.320362237703084,0,0,1.9846640872478,8.89252343540749,0,0.638341257770182,0,0,0,0,0,0,0.122026264901963,0,0,0,0,0,0,0,0,0.470531639396343,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.829412415681711,0.797525143673985,0,0,0,0,0.181848659202559,0.107410557042488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.99981093782395,0,0,0,0.184105950251841,0,0.622077260032973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.319267718114302,1.4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|short_description=p@chr7:142494463..142494479,+ | |short_description=p@chr7:142494463..142494479,+ | ||
}} | }} |
Latest revision as of 06:57, 31 July 2015
Short description: | p@chr7:142494463..142494479, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr7:142494463..142494479, + |
Coexpression cluster: | C861_CD19_chronic_NK_Natural_lymphangiectasia_acute_CD8 |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte | 2.86e-48 | 53 |
common lymphoid progenitor | 2.86e-48 | 53 |
lymphoid lineage restricted progenitor cell | 1.39e-46 | 52 |
T cell | 1.84e-29 | 25 |
pro-T cell | 1.84e-29 | 25 |
mature alpha-beta T cell | 1.15e-28 | 18 |
alpha-beta T cell | 1.15e-28 | 18 |
immature T cell | 1.15e-28 | 18 |
mature T cell | 1.15e-28 | 18 |
immature alpha-beta T cell | 1.15e-28 | 18 |
nongranular leukocyte | 4.64e-20 | 115 |
CD8-positive, alpha-beta T cell | 1.31e-18 | 11 |
B cell | 3.63e-18 | 14 |
leukocyte | 1.05e-16 | 136 |
hematopoietic lineage restricted progenitor cell | 1.56e-14 | 120 |
lymphocyte of B lineage | 2.88e-14 | 24 |
pro-B cell | 2.88e-14 | 24 |
hematopoietic stem cell | 4.09e-13 | 168 |
hematopoietic cell | 9.22e-12 | 177 |
hematopoietic oligopotent progenitor cell | 2.92e-11 | 161 |
hematopoietic multipotent progenitor cell | 2.92e-11 | 161 |
CD4-positive, alpha-beta T cell | 7.11e-10 | 6 |
natural killer cell | 6.42e-07 | 3 |
pro-NK cell | 6.42e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
blood | 2.25e-14 | 15 |
haemolymphatic fluid | 2.25e-14 | 15 |
organism substance | 2.25e-14 | 15 |
thymus | 4.17e-07 | 4 |
hemolymphoid system gland | 4.17e-07 | 4 |
thymic region | 4.17e-07 | 4 |
pharyngeal gland | 4.17e-07 | 4 |
thymus primordium | 4.17e-07 | 4 |