FFCP PHASE1:Hg19::chr7:141286167..141286178,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr7:141286167..141286178,+ | |||
|coexpression_cluster_id=C2881 | |||
|description=CAGE_peak_at_chr7:141286167..141286178,+ | |description=CAGE_peak_at_chr7:141286167..141286178,+ | ||
|id=chr7:141286167..141286178,+ | |id=chr7:141286167..141286178,+ | ||
|ontology_enrichment_celltype=CL:0000453!4.20e-24!5;CL:0000990!1.76e-13!8;CL:0000080!6.56e-12!6;CL:0000451!4.69e-11!10;CL:0000708!1.70e-10!3;CL:0002574!4.07e-08!1 | |ontology_enrichment_celltype=CL:0000453!4.20e-24!5;CL:0000990!1.76e-13!8;CL:0000080!6.56e-12!6;CL:0000451!4.69e-11!10;CL:0000708!1.70e-10!3;CL:0002574!4.07e-08!1 | ||
|ontology_enrichment_celltype_v019=CL:0000453;3.10e-70;5!CL:0000990;2.41e-39;8!CL:0000451;2.62e-32;10!CL:0001014;2.32e-12;2!CL:0001016;2.32e-12;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000453,5.29e-70,5;CL:0000990,3.25e-39,8;CL:0000451,3.34e-32,10;CL:0001014,2.59e-12,2;CL:0001016,2.59e-12,2;CL:0000988,1.04e-07,177 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:0060060!7.01e-09!1;DOID:0060061!7.01e-09!1;DOID:8691!7.01e-09!1;DOID:630!1.10e-08!1;DOID:0050177!1.10e-08!1;DOID:0050427!1.10e-08!1 | |ontology_enrichment_disease=DOID:0060060!7.01e-09!1;DOID:0060061!7.01e-09!1;DOID:8691!7.01e-09!1;DOID:630!1.10e-08!1;DOID:0050177!1.10e-08!1;DOID:0050427!1.10e-08!1 | ||
|ontology_enrichment_disease_v019=DOID:0060060;2.62e-23;1!DOID:0060061;2.62e-23;1!DOID:8691;2.62e-23;1 | |||
|ontology_enrichment_disease_v019_2=DOID:0060060,2.10e-23,1;DOID:0060061,2.10e-23,1;DOID:8691,2.10e-23,1 | |||
|ontology_enrichment_uberon=UBERON:0003210!1.70e-10!3;UBERON:0002331!2.52e-07!10;UBERON:0000358!2.52e-07!10;UBERON:0000307!2.52e-07!10;UBERON:0000091!2.52e-07!10;UBERON:0000087!2.52e-07!10;UBERON:0007806!2.52e-07!10;UBERON:0008780!2.52e-07!10;UBERON:0005728!2.52e-07!10 | |ontology_enrichment_uberon=UBERON:0003210!1.70e-10!3;UBERON:0002331!2.52e-07!10;UBERON:0000358!2.52e-07!10;UBERON:0000307!2.52e-07!10;UBERON:0000091!2.52e-07!10;UBERON:0000087!2.52e-07!10;UBERON:0007806!2.52e-07!10;UBERON:0008780!2.52e-07!10;UBERON:0005728!2.52e-07!10 | ||
|ontology_enrichment_uberon_v019=UBERON:0002331;1.42e-20;10!UBERON:0000178;5.76e-14;15!UBERON:0000179;5.76e-14;15!UBERON:0000463;5.76e-14;15!UBERON:0000478;5.65e-09;24!UBERON:0002390;5.98e-07;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002331,1.20e-20,10;UBERON:0000358,1.20e-20,10;UBERON:0000307,1.20e-20,10;UBERON:0000091,1.20e-20,10;UBERON:0000087,1.20e-20,10;UBERON:0007010,1.20e-20,10;UBERON:0007806,1.20e-20,10;UBERON:0008780,1.20e-20,10;UBERON:0005728,1.20e-20,10;UBERON:0000178,5.16e-14,15;UBERON:0000179,5.16e-14,15;UBERON:0000463,5.16e-14,15;UBERON:0000478,5.28e-09,24 | |||
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|short_description=p@chr7:141286167..141286178,+ | |short_description=p@chr7:141286167..141286178,+ | ||
}} | }} |
Latest revision as of 06:47, 31 July 2015
Short description: | p@chr7:141286167..141286178, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr7:141286167..141286178, + |
Coexpression cluster: | C2881_immature_migratory_cord_Mast_mycosis_Smooth_acute |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
Langerhans cell | 5.29e-70 | 5 |
conventional dendritic cell | 3.25e-39 | 8 |
dendritic cell | 3.34e-32 | 10 |
CD1a-positive Langerhans cell | 2.59e-12 | 2 |
immature CD1a-positive Langerhans cell | 2.59e-12 | 2 |
hematopoietic cell | 1.04e-07 | 177 |
Ontology term | p-value | n |
---|---|---|
umbilical cord | 1.20e-20 | 10 |
blastocyst | 1.20e-20 | 10 |
blastula | 1.20e-20 | 10 |
bilaminar disc | 1.20e-20 | 10 |
inner cell mass | 1.20e-20 | 10 |
cleaving embryo | 1.20e-20 | 10 |
connecting stalk | 1.20e-20 | 10 |
inner cell mass derived epiblast | 1.20e-20 | 10 |
extraembryonic mesoderm | 1.20e-20 | 10 |
blood | 5.16e-14 | 15 |
haemolymphatic fluid | 5.16e-14 | 15 |
organism substance | 5.16e-14 | 15 |
extraembryonic structure | 5.28e-09 | 24 |
Ontology term | p-value | n |
---|---|---|
non-Hodgkin lymphoma | 2.10e-23 | 1 |
cutaneous T cell lymphoma | 2.10e-23 | 1 |
mycosis fungoides | 2.10e-23 | 1 |