FFCP PHASE1:Hg19::chr7:141286151..141286162,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr7:141286151..141286162,+ | |||
|coexpression_cluster_id=C1888 | |coexpression_cluster_id=C1888 | ||
|description=CAGE_peak_at_chr7:141286151..141286162,+ | |description=CAGE_peak_at_chr7:141286151..141286162,+ | ||
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|ontology_enrichment_celltype=CL:0000453!7.44e-20!5;CL:0000990!4.39e-11!8;CL:0000080!1.05e-09!6;CL:0000451!4.43e-09!10;CL:0000708!1.56e-08!3 | |ontology_enrichment_celltype=CL:0000453!7.44e-20!5;CL:0000990!4.39e-11!8;CL:0000080!1.05e-09!6;CL:0000451!4.43e-09!10;CL:0000708!1.56e-08!3 | ||
|ontology_enrichment_celltype_v019=CL:0000453;7.85e-79;5!CL:0000990;3.75e-44;8!CL:0000451;2.96e-36;10!CL:0001014;1.46e-13;2!CL:0001016;1.46e-13;2 | |ontology_enrichment_celltype_v019=CL:0000453;7.85e-79;5!CL:0000990;3.75e-44;8!CL:0000451;2.96e-36;10!CL:0001014;1.46e-13;2!CL:0001016;1.46e-13;2 | ||
|ontology_enrichment_celltype_v019_2=CL:0000453,5.81e-79,5;CL:0000990,3.18e-44,8;CL:0000451,2.58e-36,10;CL:0001014,1.37e-13,2;CL:0001016,1.37e-13,2;CL:0000988,6.97e-09,177 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease=DOID:0060060!1.55e-07!1;DOID:0060061!1.55e-07!1;DOID:8691!1.55e-07!1;DOID:630!2.37e-07!1;DOID:0050177!2.37e-07!1;DOID:0050427!2.37e-07!1;DOID:6193!4.57e-07!1 | |ontology_enrichment_disease=DOID:0060060!1.55e-07!1;DOID:0060061!1.55e-07!1;DOID:8691!1.55e-07!1;DOID:630!2.37e-07!1;DOID:0050177!2.37e-07!1;DOID:0050427!2.37e-07!1;DOID:6193!4.57e-07!1 | ||
|ontology_enrichment_disease_v019=DOID:0060060;2.78e-26;1!DOID:0060061;2.78e-26;1!DOID:8691;2.78e-26;1 | |ontology_enrichment_disease_v019=DOID:0060060;2.78e-26;1!DOID:0060061;2.78e-26;1!DOID:8691;2.78e-26;1 | ||
|ontology_enrichment_disease_v019_2=DOID:0060060,2.78e-26,1;DOID:0060061,2.78e-26,1;DOID:8691,2.78e-26,1 | |||
|ontology_enrichment_uberon=UBERON:0003210!1.56e-08!3;UBERON:0004177!8.87e-08!7 | |ontology_enrichment_uberon=UBERON:0003210!1.56e-08!3;UBERON:0004177!8.87e-08!7 | ||
|ontology_enrichment_uberon_v019=UBERON:0002331;7.19e-23;10!UBERON:0000178;1.63e-15;15!UBERON:0000179;1.63e-15;15!UBERON:0000463;1.63e-15;15!UBERON:0000478;5.83e-10;24!UBERON:0002390;1.05e-07;32 | |ontology_enrichment_uberon_v019=UBERON:0002331;7.19e-23;10!UBERON:0000178;1.63e-15;15!UBERON:0000179;1.63e-15;15!UBERON:0000463;1.63e-15;15!UBERON:0000478;5.83e-10;24!UBERON:0002390;1.05e-07;32 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002331,8.04e-23,10;UBERON:0000358,8.04e-23,10;UBERON:0000307,8.04e-23,10;UBERON:0000091,8.04e-23,10;UBERON:0000087,8.04e-23,10;UBERON:0007010,8.04e-23,10;UBERON:0007806,8.04e-23,10;UBERON:0008780,8.04e-23,10;UBERON:0005728,8.04e-23,10;UBERON:0000178,1.76e-15,15;UBERON:0000179,1.76e-15,15;UBERON:0000463,1.76e-15,15;UBERON:0000478,6.10e-10,24 | |||
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|short_description=p@chr7:141286151..141286162,+ | |short_description=p@chr7:141286151..141286162,+ | ||
}} | }} |
Latest revision as of 06:47, 31 July 2015
Short description: | p@chr7:141286151..141286162, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr7:141286151..141286162, + |
Coexpression cluster: | C1888_hairy_migratory_immature_cord_mycosis_xeroderma_splenic |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
Langerhans cell | 5.81e-79 | 5 |
conventional dendritic cell | 3.18e-44 | 8 |
dendritic cell | 2.58e-36 | 10 |
CD1a-positive Langerhans cell | 1.37e-13 | 2 |
immature CD1a-positive Langerhans cell | 1.37e-13 | 2 |
hematopoietic cell | 6.97e-09 | 177 |
Ontology term | p-value | n |
---|---|---|
umbilical cord | 8.04e-23 | 10 |
blastocyst | 8.04e-23 | 10 |
blastula | 8.04e-23 | 10 |
bilaminar disc | 8.04e-23 | 10 |
inner cell mass | 8.04e-23 | 10 |
cleaving embryo | 8.04e-23 | 10 |
connecting stalk | 8.04e-23 | 10 |
inner cell mass derived epiblast | 8.04e-23 | 10 |
extraembryonic mesoderm | 8.04e-23 | 10 |
blood | 1.76e-15 | 15 |
haemolymphatic fluid | 1.76e-15 | 15 |
organism substance | 1.76e-15 | 15 |
extraembryonic structure | 6.10e-10 | 24 |
Ontology term | p-value | n |
---|---|---|
non-Hodgkin lymphoma | 2.78e-26 | 1 |
cutaneous T cell lymphoma | 2.78e-26 | 1 |
mycosis fungoides | 2.78e-26 | 1 |