FFCP PHASE1:Hg19::chr7:127282115..127282120,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr7:127282115..127282120,+ | |||
|description=CAGE_peak_at_chr7:127282115..127282120,+ | |description=CAGE_peak_at_chr7:127282115..127282120,+ | ||
|id=chr7:127282115..127282120,+ | |id=chr7:127282115..127282120,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0002253;5.48e-18;2!CL:0002563;1.12e-09;4!CL:0000083;1.44e-09;4!CL:0000333;6.55e-08;5 | |ontology_enrichment_celltype_v019=CL:0002253;5.48e-18;2!CL:0002563;1.12e-09;4!CL:0000083;1.44e-09;4!CL:0000333;6.55e-08;5 | ||
|ontology_enrichment_celltype_v019_2=CL:0002253,5.48e-18,2;CL:0002563,1.12e-09,4;CL:0000083,1.32e-09,4 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease=DOID:0050687!1.16e-15!143;DOID:162!9.55e-12!235;DOID:14566!2.46e-11!239;DOID:1115!3.68e-11!20;DOID:3095!5.72e-08!22;DOID:2994!5.72e-08!22 | |ontology_enrichment_disease=DOID:0050687!1.16e-15!143;DOID:162!9.55e-12!235;DOID:14566!2.46e-11!239;DOID:1115!3.68e-11!20;DOID:3095!5.72e-08!22;DOID:2994!5.72e-08!22 | ||
|ontology_enrichment_disease_v019=DOID:1799;5.05e-34;1!DOID:10165;5.05e-34;1!DOID:1798;5.05e-34;1!DOID:4231;9.07e-18;2!DOID:3193;9.07e-18;2!DOID:1909;9.07e-18;2!DOID:962;9.07e-18;2!DOID:1907;9.07e-18;2!DOID:1192;2.59e-12;3!DOID:1793;1.44e-09;4!DOID:1115;1.38e-07;20!DOID:170;8.48e-07;6!DOID:201;8.48e-07;6!DOID:0060100;8.48e-07;6!DOID:169;8.48e-07;6 | |ontology_enrichment_disease_v019=DOID:1799;5.05e-34;1!DOID:10165;5.05e-34;1!DOID:1798;5.05e-34;1!DOID:4231;9.07e-18;2!DOID:3193;9.07e-18;2!DOID:1909;9.07e-18;2!DOID:962;9.07e-18;2!DOID:1907;9.07e-18;2!DOID:1192;2.59e-12;3!DOID:1793;1.44e-09;4!DOID:1115;1.38e-07;20!DOID:170;8.48e-07;6!DOID:201;8.48e-07;6!DOID:0060100;8.48e-07;6!DOID:169;8.48e-07;6 | ||
|ontology_enrichment_disease_v019_2=DOID:1799,3.61e-34,1;DOID:10165,3.61e-34,1;DOID:1798,3.61e-34,1;DOID:1909,6.48e-18,2;DOID:4231,9.07e-18,2;DOID:1907,9.07e-18,2;DOID:3193,1.07e-17,2;DOID:962,1.07e-17,2;DOID:1192,2.89e-12,3;DOID:1793,1.32e-09,4;DOID:1115,1.42e-07,20;DOID:170,8.02e-07,6;DOID:201,8.48e-07,6;DOID:0060100,8.48e-07,6;DOID:169,8.97e-07,6 | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0003714;9.07e-18;2!UBERON:0001052;1.12e-09;4!UBERON:0001242;1.12e-09;4!UBERON:0001262;1.12e-09;4!UBERON:0004786;1.12e-09;4!UBERON:0004808;1.12e-09;4!UBERON:0001277;1.12e-09;4!UBERON:0004907;5.35e-08;5!UBERON:0000013;6.55e-08;5!UBERON:0002410;6.55e-08;5 | |ontology_enrichment_uberon_v019=UBERON:0003714;9.07e-18;2!UBERON:0001052;1.12e-09;4!UBERON:0001242;1.12e-09;4!UBERON:0001262;1.12e-09;4!UBERON:0004786;1.12e-09;4!UBERON:0004808;1.12e-09;4!UBERON:0001277;1.12e-09;4!UBERON:0004907;5.35e-08;5!UBERON:0000013;6.55e-08;5!UBERON:0002410;6.55e-08;5 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0003714,1.07e-17,2;UBERON:0001052,1.12e-09,4;UBERON:0001242,1.12e-09,4;UBERON:0001262,1.12e-09,4;UBERON:0004786,1.12e-09,4;UBERON:0004808,1.12e-09,4;UBERON:0001277,1.12e-09,4;UBERON:0004907,5.35e-08,5;UBERON:0000013,7.01e-08,5;UBERON:0002410,7.01e-08,5 | |||
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| ||
|short_description=p@chr7:127282115..127282120,+ | |short_description=p@chr7:127282115..127282120,+ | ||
}} | }} |
Latest revision as of 05:43, 31 July 2015
Short description: | p@chr7:127282115..127282120, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr7:127282115..127282120, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of large intestine | 5.48e-18 | 2 |
intestinal epithelial cell | 1.12e-09 | 4 |
epithelial cell of pancreas | 1.32e-09 | 4 |
Ontology term | p-value | n |
---|---|---|
neural tissue | 1.07e-17 | 2 |
rectum | 1.12e-09 | 4 |
intestinal mucosa | 1.12e-09 | 4 |
wall of intestine | 1.12e-09 | 4 |
gastrointestinal system mucosa | 1.12e-09 | 4 |
gastrointestinal system epithelium | 1.12e-09 | 4 |
intestinal epithelium | 1.12e-09 | 4 |
lower digestive tract | 5.35e-08 | 5 |
sympathetic nervous system | 7.01e-08 | 5 |
autonomic nervous system | 7.01e-08 | 5 |
Ontology term | p-value | n |
---|---|---|
islet cell tumor | 3.61e-34 | 1 |
endocrine pancreas cancer | 3.61e-34 | 1 |
pancreatic endocrine carcinoma | 3.61e-34 | 1 |
melanoma | 6.48e-18 | 2 |
histiocytoma | 9.07e-18 | 2 |
malignant fibroxanthoma | 9.07e-18 | 2 |
peripheral nerve sheath neoplasm | 1.07e-17 | 2 |
neurofibroma | 1.07e-17 | 2 |
peripheral nervous system neoplasm | 2.89e-12 | 3 |
pancreatic cancer | 1.32e-09 | 4 |
sarcoma | 1.42e-07 | 20 |
endocrine gland cancer | 8.02e-07 | 6 |
connective tissue cancer | 8.48e-07 | 6 |
musculoskeletal system cancer | 8.48e-07 | 6 |
neuroendocrine tumor | 8.97e-07 | 6 |