FFCP PHASE1:Hg19::chr7:12726087..12726107,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(One intermediate revision by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC= | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=262bp_to_BC043260_5end | |||
|cluster_id=chr7:12726087..12726107,- | |||
|coexpression_cluster_id=C4150 | |||
|description=CAGE_peak_1_at_BC043260_5end | |||
|id=chr7:12726087..12726107,- | |||
|ontology_enrichment_celltype=CL:0002057!2.86e-47!42;CL:0000860!6.18e-45!45;CL:0000766!3.58e-35!76;CL:0000738!3.89e-35!140;CL:0000557!5.78e-33!71;CL:0000839!5.29e-32!70;CL:0002009!9.16e-32!65;CL:0002194!1.55e-31!63;CL:0000576!1.55e-31!63;CL:0000040!1.55e-31!63;CL:0000559!1.55e-31!63;CL:0002087!1.00e-30!119;CL:0002031!4.77e-30!124;CL:0000037!9.86e-27!172;CL:0000566!9.86e-27!172;CL:0000988!7.42e-25!182;CL:0002032!1.10e-23!165;CL:0000837!1.10e-23!165;CL:0000763!4.73e-22!112;CL:0000049!4.73e-22!112;CL:0000134!9.63e-13!358;CL:0002393!1.28e-12!9;CL:0002397!1.28e-12!9;CL:0002320!1.85e-12!365;CL:0000219!1.21e-09!390;CL:0000034!1.82e-08!444;CL:0000048!2.00e-08!430;CL:0000723!2.82e-08!436;CL:0000063!1.58e-07!578 | |||
|ontology_enrichment_celltype_v019=CL:0000860;2.42e-32;33!CL:0002057;2.42e-32;33!CL:0000576;5.95e-29;48!CL:0000766;2.89e-25;69!CL:0002393;4.97e-22;6!CL:0002397;4.97e-22;6!CL:0000473;5.18e-22;39!CL:0000234;5.18e-22;39!CL:0002087;2.47e-17;104!CL:0000623;2.13e-12;3!CL:0000767;2.39e-12;3!CL:0000763;1.32e-10;100!CL:0000738;1.42e-09;136!CL:0000094;1.16e-07;8!CL:0000097;3.90e-07;5!CL:0000988;4.29e-07;177 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,3.98e-56,42;CL:0002057,3.98e-56,42;CL:0000738,2.09e-53,136;CL:0000766,2.13e-49,72;CL:0000473,3.20e-48,48;CL:0000234,3.20e-48,48;CL:0002031,1.91e-43,120;CL:0002087,4.89e-43,115;CL:0000037,3.04e-41,168;CL:0000839,3.48e-41,66;CL:0000557,1.83e-40,67;CL:0000988,1.31e-38,177;CL:0002032,1.46e-37,161;CL:0000837,1.46e-37,161;CL:0002194,3.69e-37,59;CL:0000576,3.69e-37,59;CL:0000040,3.69e-37,59;CL:0000559,3.69e-37,59;CL:0002009,9.83e-36,61;CL:0000763,3.10e-30,108;CL:0000049,3.10e-30,108;CL:0002393,1.10e-24,9;CL:0002397,1.10e-24,9;CL:0000134,8.70e-15,354;CL:0002320,2.75e-14,361;CL:0000219,1.59e-12,386;CL:0000767,2.26e-12,3;CL:0000623,2.26e-12,3;CL:0000825,2.26e-12,3;CL:0000034,2.09e-10,441;CL:0000048,2.25e-10,427;CL:0000723,4.45e-10,433;CL:0000094,9.93e-08,8;CL:0000838,1.42e-07,52;CL:0000542,2.19e-07,53;CL:0000051,2.19e-07,53;CL:0000097,3.70e-07,5;CL:0002028,3.70e-07,5 | |||
|ontology_enrichment_development_v019=CL:0002057;7.69e-38;42!CL:0000049;1.01e-07;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!1.51e-31!80;UBERON:0001474!2.40e-29!86;UBERON:0002390!3.81e-29!102;UBERON:0003061!3.81e-29!102;UBERON:0002193!1.04e-25!112;UBERON:0004765!1.73e-24!101;UBERON:0001434!1.73e-24!101;UBERON:0002405!4.19e-23!115;UBERON:0002384!8.35e-12!375;UBERON:0002204!1.27e-11!167;UBERON:0003081!4.10e-10!216 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,7.91e-35,76;UBERON:0001474,9.44e-32,82;UBERON:0002390,2.47e-29,98;UBERON:0003061,2.47e-29,98;UBERON:0004765,2.77e-28,90;UBERON:0002405,3.89e-27,93;UBERON:0002193,6.69e-26,108;UBERON:0001434,1.00e-24,100;UBERON:0002384,1.32e-13,371;UBERON:0002204,6.59e-12,167;UBERON:0003081,3.27e-10,203 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.08055698328027,4.60595277716655,3.40595471295367,0,0,0,0,0,0.293600439334847,6.09394949385065,3.00816671205213,4.99125002646459,0,0,0,0.145398238779565,0,0.727752183563449,0.929716147622738,2.05583944010913,4.33588919253145,0.28769239232215,2.30544635876191,6.14853797710322,3.7922024881028,5.16387746867061,13.5426486594342,0.941211697713023,0.272906150057846,4.49446968890169,1.83650335422542,1.28371610830437,4.47535988059329,0.329851300186716,0.598390972864896,0.426224750532694,0.290209238628584,0.56738522469114,1.24564449799115,1.00499466102697,1.0429658368404,6.73285418585862,1.21079900526674,1.47311054395026,2.53169909952708,2.11255286311942,2.76385589954557,2.51590374610051,1.12328631146495,0.600707571366025,0.32145117339416,0.855038231223746,1.19350006319454,1.0959849225878,0,0,0.889509253863555,0.426730222566507,0,0,0,0,2.84606484554724,2.34894875748376,3.82273228125229,0,1.12101712596307,0.263384084775077,1.180258620683,0,3.70082698199117,0,3.2592226663359,2.36723902867367,0,0,0.294605907474837,0.664601683750863,0.270803863765016,0,0.130059347559878,0.164437904603676,0,0,0.593146252648242,1.07016331235885,0,0,0.383220493601921,1.37450978193052,1.26509846009751,0,0,0,0,0,0,0,0,3.02410114837099,1.06976078313403,2.46201486600758,0,0.670700859703636,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0.174129737299267,0,0.476981248610684,1.14398982156026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112611480483322,0,0,0,1.31780417436063,0,0,0,0,0.132409180813219,0.286836620748814,0.354668382198357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103325781175765,0,0,0,0,0,0,0,0,0,0.150238058906597,0.226864366320042,0,0,0,0,0,0,0,0.168776332241266,0,0.252433774244115,0.0920498986422993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.982827216677626,0,0,0.122988438543114,0,0,0,0,0.0925884451585296,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0895585227028483,0,0,0,0,2.90259361757081,2.30591925467138,3.1560608356595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.355391948742546,0,0,0,0,0,0,0,0,0,0,0.144781306667579,0,0,0,4.3346767244424,4.9594342217689,5.13372145118993,0,0,0,0,0,0,0,0,0,0,0.271265023699736,0,0,0,0,0,0,0,0,0,0,0,0,1.03384013061444,2.15714200818617,0.853820462427555,0,0,0,0,0.153461973288062,0,0,0,0,0,0.154209693802656,0,0,0,0,0.241718899183244,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183138929636687,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.31481234683064,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.281695602532241,0.143411352204052,0,0,0,0,0.329294892959902,0,0,0,0.670302275535787,1.08890984861323,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.735120647943095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.333698283423817,0,0,0,0,0,0,0,0,0,0,0,0.23874448473769,0.296964680832639,0,0,0,0,0.16480387422676,0,0.19924798825107,0,0,0,0,0,0.179736702294654,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03423011972439,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.638002319463839,0,0,0,0,0,0,0,0,0,0.158936578980379,0,0.163232808159148,0,0,0,0,0,0.889563386041866,0,0,0,0,0,0,0.19566461893209,0,0,0,0,0.126373159256976,0,0,0,0,0,0,0,0,0,0.195984794828755,0.0870592065804026,0,0,0,0,0.0821154570532092,0.0969890164884194,0,0,0,0,0,0,0.320635281006135,0,0,0,0,0.171594997861965,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196854963029498,0,0,0,0,0,0,0,0.77380195455795,0,0,0.0788057072991982,0,0.105600336519406,0,0,0,0,0,0,0,0,0,0.410462603746695,0,0,0,0,0,0,0.171086837884329,0,0,0,0,0,0.197611631897944,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.303298235083296,0,0,0,0,0.149254802886874,0,0,0.568209015825267,0.251567901752575,0,0,0,0,0,0,0,0.155262956876259,0,0,0,0.150257608997218,0,0,0,0,0.464033759878494,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132864840313363,0,0,0.245772908753719,0,0,0,0,0,0.552317850755522,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11796972334774,0,0.115525666150338,0,0,0,0,0,0,0,0,1.18284868973636,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111231401892069,0,0,0,0,0.215927591218621,0.9555033757741,0,0,0.116241425368125,0,0,0,0,0,0,0,0.0852134047591577,0,0.22910686854405,0,0.955538938977433,0,0,0.121917924982269,0,0,0,0,0.233939463462106,0.198950775161368,0,0.11294608203896,0,0,0.0771741581079447,0,0,0,0.235676547101626,0,0.297046400327086,0,0,0,0,0,0,0.352894871715692,0.0802413666891683,0,0,0,0,0,0,0,0,0,0,0,0,0.126698501011437,0,0,0,0,0,0,0,0,0,0,0.0645889098360061,0.124149428591716,0,0,0,0,0,0.0673520530145875,0,0,0.244209805832924,0.106727345877715,0,0,0,0,0,0,0,0 | |||
|short_description=p1@BC043260 | |||
}} |
Latest revision as of 05:42, 31 July 2015
Short description: | p1@BC043260 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_BC043260_5end |
Coexpression cluster: | C4150_CD14_Natural_Basophils_CD8_CD4_Eosinophils_Neutrophils |
Association with transcript: | 262bp_to_BC043260_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 7.91e-35 | 76 |
bone element | 9.44e-32 | 82 |
hematopoietic system | 2.47e-29 | 98 |
blood island | 2.47e-29 | 98 |
skeletal element | 2.77e-28 | 90 |
immune system | 3.89e-27 | 93 |
hemolymphoid system | 6.69e-26 | 108 |
skeletal system | 1.00e-24 | 100 |
connective tissue | 1.32e-13 | 371 |
musculoskeletal system | 6.59e-12 | 167 |
lateral plate mesoderm | 3.27e-10 | 203 |