FFCP PHASE1:Hg19::chr7:107338327..107338350,+: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr7:107338327..107338350,+ | |||
|coexpression_cluster_id=C348 | |||
|description=CAGE_peak_at_chr7:107338327..107338350,+ | |||
|id=chr7:107338327..107338350,+ | |||
|ontology_enrichment_celltype=CL:0000148!1.53e-15!10;CL:0000541!1.53e-15!10;CL:0000147!6.60e-11!14;CL:0000333!2.22e-08!41;CL:0000710!1.99e-07!20;CL:0002567!6.33e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0002566;1.84e-34;1!CL:0000148;2.27e-30;10!CL:0000147;5.78e-22;14!CL:0000710;1.23e-15;20!CL:0002567;2.59e-12;3!CL:0000075;8.62e-12;27!CL:0000149;1.44e-09;4!CL:0002077;1.46e-08;34 | |||
|ontology_enrichment_celltype_v019_2=CL:0002566,1.84e-34,1;CL:0000148,1.68e-30,10;CL:0000541,1.68e-30,10;CL:0000147,4.67e-22,14;CL:0000710,1.06e-15,20;CL:0002567,2.07e-12,3;CL:0000075,7.72e-12,27;CL:0000149,1.32e-09,4;CL:0002077,1.48e-09,34;CL:0000333,1.06e-07,41 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:5409;1.44e-09;4 | |||
|ontology_enrichment_disease_v019_2=DOID:5409,1.44e-09,4 | |||
|ontology_enrichment_uberon=UBERON:0001869!5.25e-29!32;UBERON:0001893!3.93e-27!34;UBERON:0001950!1.11e-26!20;UBERON:0002791!1.67e-24!33;UBERON:0002619!3.92e-24!22;UBERON:0002020!1.06e-23!34;UBERON:0003528!1.06e-23!34;UBERON:0000955!1.52e-23!69;UBERON:0006238!1.52e-23!69;UBERON:0000073!2.95e-23!94;UBERON:0001016!2.95e-23!94;UBERON:0001017!3.62e-23!82;UBERON:0002780!5.56e-22!41;UBERON:0001890!5.56e-22!41;UBERON:0006240!5.56e-22!41;UBERON:0005743!7.50e-22!86;UBERON:0001049!1.70e-21!57;UBERON:0005068!1.70e-21!57;UBERON:0006241!1.70e-21!57;UBERON:0007135!1.70e-21!57;UBERON:0003080!2.21e-21!42;UBERON:0000956!4.77e-21!25;UBERON:0000203!4.77e-21!25;UBERON:0002616!2.44e-18!59;UBERON:0000200!1.10e-17!6;UBERON:0003056!1.02e-15!61;UBERON:0003075!1.64e-14!86;UBERON:0007284!1.64e-14!86;UBERON:0007023!1.08e-13!115;UBERON:0002346!1.14e-13!90;UBERON:0002771!1.50e-13!3;UBERON:0001871!3.83e-13!7;UBERON:0004121!1.47e-11!169;UBERON:0000924!3.71e-11!173;UBERON:0006601!3.71e-11!173;UBERON:0000033!3.98e-11!123;UBERON:0000153!2.18e-10!129;UBERON:0007811!2.18e-10!129;UBERON:0002021!4.31e-08!5;UBERON:0002420!1.38e-07!9;UBERON:0007245!1.38e-07!9;UBERON:0010009!1.38e-07!9;UBERON:0010011!1.38e-07!9;UBERON:0000454!1.38e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0002114;2.59e-12;2!UBERON:0002108;6.55e-08;4!UBERON:0002021;6.55e-08;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002114,2.89e-12,2;UBERON:0002108,7.01e-08,4;UBERON:0002021,7.49e-08,5 | |||
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| ||
|short_description=p@chr7:107338327..107338350,+ | |||
}} | }} |
Latest revision as of 04:54, 31 July 2015
Short description: | p@chr7:107338327..107338350, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr7:107338327..107338350, + |
Coexpression cluster: | C348_Melanocyte_melanoma_retina_cervical_eye_carcinoid_Basophils |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
dark melanocyte | 1.84e-34 | 1 |
melanocyte | 1.68e-30 | 10 |
melanoblast | 1.68e-30 | 10 |
pigment cell | 4.67e-22 | 14 |
neurecto-epithelial cell | 1.06e-15 | 20 |
light melanocyte | 2.07e-12 | 3 |
columnar/cuboidal epithelial cell | 7.72e-12 | 27 |
visual pigment cell | 1.32e-09 | 4 |
ecto-epithelial cell | 1.48e-09 | 34 |
migratory neural crest cell | 1.06e-07 | 41 |
Ontology term | p-value | n |
---|---|---|
duodenum | 2.89e-12 | 2 |
small intestine | 7.01e-08 | 4 |
occipital lobe | 7.49e-08 | 5 |
Ontology term | p-value | n |
---|---|---|
lung small cell carcinoma | 1.44e-09 | 4 |