FFCP PHASE1:Hg19::chr7:106415430..106415437,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-19bp_to_ENST00000490162_5end | |association_with_transcript=-19bp_to_ENST00000490162_5end | ||
|cluster_id=chr7:106415430..106415437,+ | |||
|coexpression_cluster_id=C461 | |coexpression_cluster_id=C461 | ||
|description=CAGE_peak_2_at_ENST00000490162_5end | |description=CAGE_peak_2_at_ENST00000490162_5end | ||
|id=chr7:106415430..106415437,+ | |id=chr7:106415430..106415437,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0002251;2.29e-11;20 | |||
|ontology_enrichment_celltype_v019_2=CL:0002251,2.29e-11,20 | |||
|ontology_enrichment_development_v019=UBERON:0008814;1.55e-98;2!UBERON:0010056;1.55e-98;2 | |||
|ontology_enrichment_disease=DOID:1036!2.62e-11!8;DOID:162!7.82e-11!235;DOID:14566!1.96e-10!239;DOID:1749!4.70e-09!14;DOID:305!1.51e-08!106;DOID:4074!3.21e-08!2;DOID:4905!3.21e-08!2;DOID:3498!3.21e-08!2;DOID:0050687!1.64e-07!143 | |ontology_enrichment_disease=DOID:1036!2.62e-11!8;DOID:162!7.82e-11!235;DOID:14566!1.96e-10!239;DOID:1749!4.70e-09!14;DOID:305!1.51e-08!106;DOID:4074!3.21e-08!2;DOID:4905!3.21e-08!2;DOID:3498!3.21e-08!2;DOID:0050687!1.64e-07!143 | ||
|ontology_enrichment_disease_v019=DOID:1749;1.43e-15;14!DOID:7;2.32e-07;39 | |||
|ontology_enrichment_disease_v019_2=DOID:1749,1.43e-15,14 | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0001723;2.39e-66;3!UBERON:0001033;2.39e-66;3!UBERON:0003343;3.10e-50;4!UBERON:0004785;3.10e-50;4!UBERON:0000974;4.27e-34;6!UBERON:0003729;1.21e-16;13!UBERON:0000161;6.95e-12;19!UBERON:0000166;6.95e-12;19!UBERON:0000344;2.29e-11;20!UBERON:0000020;4.42e-10;23!UBERON:0001032;1.01e-09;24!UBERON:0004456;1.01e-09;24!UBERON:0000165;1.52e-08;28 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001723,2.39e-66,3;UBERON:0001033,2.39e-66,3;UBERON:0010056,2.39e-66,3;UBERON:0003343,3.10e-50,4;UBERON:0004785,3.10e-50,4;UBERON:0000974,3.81e-21,10;UBERON:0001042,3.81e-21,10;UBERON:0009145,3.81e-21,10;UBERON:0006562,2.25e-19,11;UBERON:0003729,1.21e-16,13;UBERON:0008814,1.85e-12,18;UBERON:0001557,6.95e-12,19;UBERON:0000344,2.29e-11,20;UBERON:0000166,1.80e-10,22;UBERON:0000020,1.01e-09,24;UBERON:0001032,1.01e-09,24;UBERON:0004456,1.01e-09,24;UBERON:0000165,2.67e-08,29;UBERON:0000930,2.67e-08,29;UBERON:0000161,5.81e-07,36 | |||
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| ||
|short_description=p2@ENST00000490162 | |short_description=p2@ENST00000490162 | ||
}} | }} |
Latest revision as of 04:49, 31 July 2015
Short description: | p2@ENST00000490162 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_ENST00000490162_5end |
Coexpression cluster: | C461_oral_chorionic_squamous_amniotic_epidermoid_gall_bronchogenic |
Association with transcript: | -19bp_to_ENST00000490162_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of alimentary canal | 2.29e-11 | 20 |
Ontology term | p-value | n |
---|---|---|
tongue | 2.39e-66 | 3 |
gustatory system | 2.39e-66 | 3 |
future tongue | 2.39e-66 | 3 |
mucosa of oral region | 3.10e-50 | 4 |
respiratory system mucosa | 3.10e-50 | 4 |
neck | 3.81e-21 | 10 |
chordate pharynx | 3.81e-21 | 10 |
pharyngeal region of foregut | 3.81e-21 | 10 |
pharynx | 2.25e-19 | 11 |
mouth mucosa | 1.21e-16 | 13 |
pharyngeal arch system | 1.85e-12 | 18 |
upper respiratory tract | 6.95e-12 | 19 |
mucosa | 2.29e-11 | 20 |
oral opening | 1.80e-10 | 22 |
sense organ | 1.01e-09 | 24 |
sensory system | 1.01e-09 | 24 |
entire sense organ system | 1.01e-09 | 24 |
mouth | 2.67e-08 | 29 |
stomodeum | 2.67e-08 | 29 |
orifice | 5.81e-07 | 36 |
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 1.43e-15 | 14 |