FFCP PHASE1:Hg19::chr7:10196589..10196595,-: Difference between revisions
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|id=chr7:10196589..10196595,-
|short_description=p@chr7:10196589..10196595,-
|description=CAGE_peak_at_chr7:10196589..10196595,-
|association_with_transcript=NA
|E...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr7:10196589..10196595,- | |||
|coexpression_cluster_id=C1679 | |||
|description=CAGE_peak_at_chr7:10196589..10196595,- | |||
|id=chr7:10196589..10196595,- | |||
|ontology_enrichment_celltype=CL:0002139!1.45e-30!24;CL:0000115!9.22e-28!35;CL:0002078!1.85e-21!44;CL:0000071!2.67e-18!18;CL:0002546!2.67e-18!18;CL:0002618!6.14e-17!3;CL:0000213!7.11e-16!57;CL:0000215!7.11e-16!57;CL:0005020!4.45e-15!6;CL:0002138!4.45e-15!6;CL:0005022!4.45e-15!6;CL:0002543!8.77e-15!6;CL:1000413!5.18e-10!9 | |||
|ontology_enrichment_celltype_v019=CL:0002138;1.22e-59;6!CL:0002139;5.74e-27;24!CL:0000115;1.96e-23;36!CL:0002262;5.15e-21;2!CL:1000398;5.15e-21;2!CL:0002078;1.60e-18;45!CL:0002618;1.71e-14;3!CL:0000213;2.68e-11;58!CL:0000215;2.68e-11;58!CL:0002543;6.55e-08;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0005020,1.82e-59,6;CL:0002138,1.82e-59,6;CL:0005022,1.82e-59,6;CL:0000115,5.37e-28,36;CL:0002139,6.34e-27,24;CL:0002078,1.46e-22,45;CL:0002262,3.81e-21,2;CL:1000398,3.81e-21,2;CL:0000213,1.12e-17,58;CL:0000215,1.12e-17,58;CL:0002618,1.60e-14,3;CL:0000222,8.28e-09,121;CL:0002543,6.34e-08,6 | |||
|ontology_enrichment_development_v019=CL:0005022;1.22e-59;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001986!2.67e-18!18;UBERON:0004638!2.67e-18!18;UBERON:0004852!2.67e-18!18;UBERON:0000487!9.57e-15!22;UBERON:0002465!1.93e-13!10;UBERON:0006914!7.96e-13!25;UBERON:0000055!1.32e-12!69;UBERON:0000341!1.62e-11!2;UBERON:0001473!2.47e-11!8;UBERON:0004536!2.47e-11!8;UBERON:0006558!2.47e-11!8;UBERON:0002049!1.23e-10!79;UBERON:0007798!1.23e-10!79;UBERON:0002066!2.31e-10!5;UBERON:0003915!5.18e-10!9;UBERON:0004700!5.18e-10!9;UBERON:0001917!5.18e-10!9;UBERON:0001638!6.85e-10!9;UBERON:0003920!6.85e-10!9;UBERON:0004582!6.85e-10!9;UBERON:0007023!3.42e-08!115;UBERON:0004535!6.09e-08!110;UBERON:0001009!1.19e-07!113;UBERON:0001981!2.66e-07!60;UBERON:0007500!2.66e-07!60;UBERON:0004537!2.66e-07!60;UBERON:0006965!2.66e-07!60;UBERON:0002363!5.43e-07!1;UBERON:0007647!5.43e-07!1;UBERON:0010115!5.43e-07!1;UBERON:0004872!6.38e-07!84;UBERON:0006122!6.80e-07!1;UBERON:0000989!7.60e-07!1;UBERON:0008811!7.60e-07!1;UBERON:0006258!7.60e-07!1;UBERON:0005876!7.60e-07!1;UBERON:0004874!7.60e-07!1;UBERON:0004111!8.92e-07!241;UBERON:0002171!9.48e-07!1;UBERON:0006518!9.48e-07!1;UBERON:0008949!9.48e-07!1;UBERON:0000101!9.48e-07!1;UBERON:0002167!9.48e-07!1 | |||
|ontology_enrichment_uberon_v019=UBERON:0001473;5.04e-45;8!UBERON:0004536;5.04e-45;8!UBERON:0006558;5.04e-45;8!UBERON:0002465;3.05e-36;10!UBERON:0001281;5.15e-21;2!UBERON:0003497;5.15e-21;2!UBERON:0003909;5.15e-21;2!UBERON:0003835;5.15e-21;2!UBERON:0001280;1.71e-14;3!UBERON:0004647;1.71e-14;3!UBERON:0002405;4.96e-14;27!UBERON:0000055;2.64e-11;65!UBERON:0002066;3.10e-09;5!UBERON:0002049;1.48e-07;75!UBERON:0007798;1.48e-07;75!UBERON:0002193;3.40e-07;42!UBERON:0003513;5.86e-07;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001473,6.81e-45,8;UBERON:0004536,6.81e-45,8;UBERON:0006558,6.81e-45,8;UBERON:0002465,3.88e-36,10;UBERON:0001281,3.81e-21,2;UBERON:0003497,3.81e-21,2;UBERON:0003909,3.81e-21,2;UBERON:0003835,3.81e-21,2;UBERON:0000055,3.48e-15,68;UBERON:0001280,1.40e-14,3;UBERON:0004647,1.40e-14,3;UBERON:0005171,1.40e-14,3;UBERON:0002049,2.51e-13,78;UBERON:0007798,2.51e-13,78;UBERON:0004535,1.03e-09,109;UBERON:0001009,1.80e-09,112;UBERON:0002066,2.97e-09,5;UBERON:0002394,5.92e-08,6;UBERON:0003928,5.92e-08,6;UBERON:0003513,5.38e-07,7 | |||
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|short_description=p@chr7:10196589..10196595,- | |||
}} | }} |
Latest revision as of 04:27, 31 July 2015
Short description: | p@chr7:10196589..10196595, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr7:10196589..10196595, - |
Coexpression cluster: | C1679_Endothelial_retina_Hepatic_lung_Renal_kidney_gall |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphangioblast | 1.82e-59 | 6 |
endothelial cell of lymphatic vessel | 1.82e-59 | 6 |
vascular lymphangioblast | 1.82e-59 | 6 |
endothelial cell | 5.37e-28 | 36 |
endothelial cell of vascular tree | 6.34e-27 | 24 |
meso-epithelial cell | 1.46e-22 | 45 |
endothelial cell of sinusoid | 3.81e-21 | 2 |
endothelial cell of hepatic sinusoid | 3.81e-21 | 2 |
lining cell | 1.12e-17 | 58 |
barrier cell | 1.12e-17 | 58 |
endothelial cell of umbilical vein | 1.60e-14 | 3 |
mesodermal cell | 8.28e-09 | 121 |
vein endothelial cell | 6.34e-08 | 6 |
Ontology term | p-value | n |
---|---|---|
lymphatic vessel | 6.81e-45 | 8 |
lymph vasculature | 6.81e-45 | 8 |
lymphatic part of lymphoid system | 6.81e-45 | 8 |
lymphoid system | 3.88e-36 | 10 |
hepatic sinusoid | 3.81e-21 | 2 |
abdomen blood vessel | 3.81e-21 | 2 |
sinusoid | 3.81e-21 | 2 |
abdominal segment blood vessel | 3.81e-21 | 2 |
vessel | 3.48e-15 | 68 |
liver parenchyma | 1.40e-14 | 3 |
liver lobule | 1.40e-14 | 3 |
hepatic duct | 1.40e-14 | 3 |
vasculature | 2.51e-13 | 78 |
vascular system | 2.51e-13 | 78 |
cardiovascular system | 1.03e-09 | 109 |
circulatory system | 1.80e-09 | 112 |
umbilical vein | 2.97e-09 | 5 |
bile duct | 5.92e-08 | 6 |
digestive system duct | 5.92e-08 | 6 |
trunk blood vessel | 5.38e-07 | 7 |