FFCP PHASE1:Hg19::chr7:100205345..100205374,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr7:100205345..100205374,+ | |||
|coexpression_cluster_id=C1779 | |||
|description=CAGE_peak_at_chr7:100205345..100205374,+ | |description=CAGE_peak_at_chr7:100205345..100205374,+ | ||
|id=chr7:100205345..100205374,+ | |id=chr7:100205345..100205374,+ | ||
|ontology_enrichment_celltype=CL:0000055!2.21e-26!180;CL:0000057!5.36e-19!75;CL:0002620!8.18e-13!23;CL:0000183!7.63e-10!59;CL:0000187!2.00e-09!54;CL:0000680!1.70e-08!57;CL:0000056!1.70e-08!57;CL:0000355!1.70e-08!57;CL:0000048!1.71e-08!430;CL:0000393!1.89e-08!60;CL:0000211!1.89e-08!60;CL:0000723!5.69e-08!436;CL:0000034!6.19e-08!444 | |ontology_enrichment_celltype=CL:0000055!2.21e-26!180;CL:0000057!5.36e-19!75;CL:0002620!8.18e-13!23;CL:0000183!7.63e-10!59;CL:0000187!2.00e-09!54;CL:0000680!1.70e-08!57;CL:0000056!1.70e-08!57;CL:0000355!1.70e-08!57;CL:0000048!1.71e-08!430;CL:0000393!1.89e-08!60;CL:0000211!1.89e-08!60;CL:0000723!5.69e-08!436;CL:0000034!6.19e-08!444 | ||
|ontology_enrichment_celltype_v019=CL:0000135;1.09e-11;3!CL:0000388;1.09e-11;3!CL:0000499;8.67e-09;28!CL:0002575;1.75e-08;2!CL:0002600;4.31e-08;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,2.96e-14,76;CL:0000135,4.32e-12,3;CL:0000388,4.32e-12,3;CL:0000499,5.23e-09,28;CL:0002575,1.44e-08,2;CL:0002600,2.42e-08,2;CL:0002320,1.39e-07,361 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000914!5.11e-12!83;UBERON:0002329!5.11e-12!83;UBERON:0003077!5.11e-12!83;UBERON:0003059!5.11e-12!83;UBERON:0007282!5.11e-12!83;UBERON:0009618!5.11e-12!83;UBERON:0007285!5.11e-12!83;UBERON:0003102!1.14e-10!95;UBERON:0002199!3.02e-10!45;UBERON:0002416!3.02e-10!45;UBERON:0004290!1.19e-09!70;UBERON:0000486!4.93e-09!82;UBERON:0001134!2.90e-08!61;UBERON:0002036!2.90e-08!61;UBERON:0003082!2.90e-08!61;UBERON:0002097!9.61e-08!40;UBERON:0002385!9.68e-08!63;UBERON:0001015!9.68e-08!63;UBERON:0000383!9.68e-08!63 | |||
|ontology_enrichment_uberon_v019=UBERON:0007846;1.09e-11;3!UBERON:0000043;1.09e-11;3!UBERON:0007845;1.09e-11;3!UBERON:0004905;1.61e-07;8!UBERON:0000982;1.61e-07;8!UBERON:0004770;1.61e-07;8!UBERON:0002072;2.10e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007846,4.32e-12,3;UBERON:0000043,4.32e-12,3;UBERON:0007845,4.32e-12,3;UBERON:0003102,7.53e-10,99;UBERON:0002199,9.39e-09,46;UBERON:0002416,9.39e-09,46;UBERON:0004905,1.08e-07,8;UBERON:0000982,1.08e-07,8;UBERON:0004770,1.08e-07,8;UBERON:0002072,1.31e-07,5;UBERON:0002384,3.88e-07,371 | |||
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|phase1_expression=0,0.214100523890983,0.140954404095971,1.0007329835313,0,0,2.53299878168311,1.89515962028049,0.522371256399677,0,0,0,0,0.866364470720326,0.994192127183747,0,0,0,0,0,0,0,0,0,0.125542639594803,0,0,0,0,0,0,0,0,0,0.0774672005803016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,0,0.12786256184353,1.0843174571537,0,1.88300474649071,0,0.973269740605272,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.275118041940067,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12663051166458,0.264818361626438,12.333974692199,1.77334191099179,1.12135520028461,0,0.24666754841716,0.311211035399766,0.134710672069688,0.326923806226917,0.302714855289863,1.15235184896,0,0.312160076830321,0,1.04614076386261,0,0.323745888736263,0.140450806702248,0.408308342509787,0,0,1.18800285728205,4.20353779773547,0,1.43723628363248,0,0.250237039743928,0.277064115484183,0,1.83892677479412,1.65261864797256,0,0.358779271377724,1.06778694409284,0.423863802319124,2.40072876867522,0,1.03056216018252,0.558350568994769,0.337552664482532,0.68205903612839,0.252433774244115,0.184099797284599,1.13152239773168,2.4850671476163,0.403008392910561,0.169560592310488,0,0,0,0,0,0,0.10366105501537,0.252320850875628,0,0,1.28648187638577,0,0,1.44375896333917,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325808305310325,0,0,0,0.117408694235822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112131084345361,0,0.1466765716419,0,0,0,0.531876233169741,0,0,0,0.799266537048298,0,1.08524321078289,0.823240336780769,0,0,0,0,0,0,0,0,0,0,1.14861935834114,0,0,0,0,0.112085143993527,0,0,0,0,0,0,0,0,0,0,0,0.981531933753119,4.00136416847742,1.62759014219841,0.623912584592421,1.96271887676878,0.315404830067869,0.585707074963566,0.300946099727719,4.5481500811197,4.1389228517002,0,0.368738337083406,1.12948698808508,1.37060810223918,2.74514739048685,0,0,0,0,0,0.30239029332968,0,0,0,0,0,0.160853921143607,0,0,2.48586415438378,0.574890092096664,0,1.27831416305955,0.120859449591622,0,0,0.229628896329213,0.728364672026868,1.83574180943194,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0,0.082509499920588,0,0,0,1.35339005608971,0,0.307007349452259,0.275673144969061,0.859361958946189,0.145016693914229,0.255679882248303,0.623224249527161,0,0,0,0,0,3.1481234683064,0,0,0,0.869932992075073,0.18532421910392,0,0,0,0,0.255897791311334,0.855877976067841,0.636406495851874,0.78494864019923,0,0.274537029736055,0.589062011728432,0,0,0,0.975267478179181,0.243713489631284,0,1.50149902548784,0.848432591722276,1.13008116620243,0.551365343546124,0,0,1.15755106853338,1.9676842561399,0,0.6196469961995,0.281695602532241,0.286822704408103,0,0,0.709522128141196,1.47775344708365,1.64647446479951,0.379473173765715,1.04980416073495,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213648142254946,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0.111443384277478,0,0,0,0,0,0,0,0,0,0.19924798825107,0,0.251932747854276,0,0,0,0,0,0,0.197286811273867,0,0,0,0,0,0,0,0,0,0,0,0,0,0.347249989866585,0,0,0,0.110579259931225,0,0,0.10893846351899,0,0.384751292518985,0,0,0,0,0,1.00757352742049,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189559738885464,0,0,0,0,0,0,0,0,0,0,0,1.04836000945218,0,0,0,0,0,0,0.225980740780532,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.418411385249333,0,0.577901179803038,0,0,0,0,0,0.558564802544508,0,0,0,0,0,0,0,0,0.0787831823072236,0,0,0,0,0,0,0,0.550157746388935,0,0.2249738915515,0,0,0,0,0,0,0,0,1.42939065274673,0,0,0,0,0,0,0,0.511164065356265,0.113312091520126,0,0,0,0,0,0,0.106787412567695,0,0,0.496166021811951,0,0,0,0,0,0,0,0,0,0,0,0,0.110929051536852,0,0,0,0,1.14186133417987,0,0,0,0,0.233713309847224,0,0.378806010550178,0.50313580350515,0.889811221596536,0.228840068396924,0.604923695052956,0.466311601748341,0.147855149989634,0,0,0,0.829412415681711,0,0,0,0,0,0.545545977607678,0.107410557042488,0.464033759878494,0.796191777397232,0,2.06037423109676,0.336749488765919,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.552317850755522,0,0,0,0,0,0.109209638192014,0.33946505990805,0,0,0,0.318004350653419,0,0,4.58478726797889,0.6124909547064,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.397832444232549,0.0752103283492573,0,0,0,0,0,0,0.781078098613847,0.206686796501184,0,0,0,0,0,0,0,0,0,0,0.177404740325278,0,0,0,0,0,0,0.235479278551542,0,0,0,0,0,0,0,0,0.347716544605159,1.60342272946051,0,0,0,0,0.236664001461131,0,0,0,0,0,0,0,0,0,0,1.1598144313382,0.485710993059139,0,0,0,0,0,0,0,0.218559560503957,0,0,0,0,0,0,0,0,0,0,0,0,0.0802413666891683,0,0,0,0.473314686579554,0,0,0,1.85997509083376,2.31087814315709,1.73050624849516,0.126166424835079,0,0.253397002022874,0,0,0,0,0.151557396436479,0.267964130156178,0,0,0,0.23806443146374,0,0.124149428591716,0,0,0.202117188958219,0,0,0,0,0.332660356546013,0,0,0,0,0,0,0,0,0.402547587182052,0 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|short_description=p@chr7:100205345..100205374,+ | |short_description=p@chr7:100205345..100205374,+ | ||
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Latest revision as of 04:05, 31 July 2015
Short description: | p@chr7:100205345..100205374, + |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr7:100205345..100205374, + |
Coexpression cluster: | C1779_Osteoblast_Fibroblast_Mesenchymal_Smooth_normal_Pericytes_Nucleus |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 2.96e-14 | 76 |
fibrocyte | 4.32e-12 | 3 |
tendon cell | 4.32e-12 | 3 |
stromal cell | 5.23e-09 | 28 |
central nervous system pericyte | 1.44e-08 | 2 |
smooth muscle cell of trachea | 2.42e-08 | 2 |
connective tissue cell | 1.39e-07 | 361 |
Ontology term | p-value | n |
---|---|---|
dense regular connective tissue | 4.32e-12 | 3 |
tendon | 4.32e-12 | 3 |
regular connective tissue | 4.32e-12 | 3 |
surface structure | 7.53e-10 | 99 |
integument | 9.39e-09 | 46 |
integumental system | 9.39e-09 | 46 |
articulation | 1.08e-07 | 8 |
skeletal joint | 1.08e-07 | 8 |
articular system | 1.08e-07 | 8 |
hypodermis | 1.31e-07 | 5 |
connective tissue | 3.88e-07 | 371 |