FFCP PHASE1:Hg19::chr6:73344775..73344779,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr6:73344775..73344779,+ | |||
|description=CAGE_peak_at_chr6:73344775..73344779,+ | |description=CAGE_peak_at_chr6:73344775..73344779,+ | ||
|id=chr6:73344775..73344779,+ | |id=chr6:73344775..73344779,+ | ||
|ontology_enrichment_celltype=CL:0000945!3.86e-08!24;CL:0000826!3.86e-08!24 | |ontology_enrichment_celltype=CL:0000945!3.86e-08!24;CL:0000826!3.86e-08!24 | ||
|ontology_enrichment_celltype_v019=CL:0000817;9.12e-14;1!CL:0000054;1.59e-07;2!CL:0000137;1.59e-07;2!CL:0000092;1.59e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000054,1.87e-07,2;CL:0000137,1.87e-07,2;CL:0000092,1.87e-07,2 | |||
|ontology_enrichment_development_v019=UBERON:0003056;1.64e-17;3!UBERON:0005425;9.12e-14;1 | |||
|ontology_enrichment_disease=DOID:2531!5.16e-17!51;DOID:0060083!5.16e-17!51;DOID:1240!3.94e-12!39;DOID:162!1.33e-10!235;DOID:14566!1.80e-10!239;DOID:0050686!2.78e-10!137;DOID:8692!2.37e-08!31 | |||
|ontology_enrichment_disease_v019=DOID:200;1.59e-07;2!DOID:4305;1.59e-07;2!DOID:3910;1.59e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:2531,1.71e-08,51;DOID:0060083,1.71e-08,51;DOID:200,1.87e-07,2;DOID:4305,1.87e-07,2;DOID:3910,2.25e-07,2 | |||
|ontology_enrichment_uberon=UBERON:0001869!3.37e-12!32;UBERON:0002619!2.80e-11!22;UBERON:0001893!3.93e-11!34;UBERON:0001950!5.03e-11!20;UBERON:0000956!1.39e-10!25;UBERON:0000203!1.39e-10!25;UBERON:0002791!1.71e-10!33;UBERON:0002780!2.29e-10!41;UBERON:0001890!2.29e-10!41;UBERON:0006240!2.29e-10!41;UBERON:0002020!5.06e-10!34;UBERON:0003528!5.06e-10!34;UBERON:0003080!5.74e-10!42;UBERON:0000955!1.32e-08!69;UBERON:0006238!1.32e-08!69;UBERON:0000073!1.48e-08!94;UBERON:0001016!1.48e-08!94;UBERON:0003056!7.47e-08!61;UBERON:0000153!1.60e-07!129;UBERON:0007811!1.60e-07!129;UBERON:0002346!1.93e-07!90;UBERON:0001049!3.69e-07!57;UBERON:0005068!3.69e-07!57;UBERON:0006241!3.69e-07!57;UBERON:0007135!3.69e-07!57;UBERON:0000924!6.66e-07!173;UBERON:0006601!6.66e-07!173 | |||
|ontology_enrichment_uberon_v019=UBERON:0000941;9.12e-14;1!UBERON:0001785;9.12e-14;1!UBERON:0002464;9.12e-14;1!UBERON:0004904;9.12e-14;1!UBERON:0001021;9.12e-14;1!UBERON:0002346;2.21e-13;4!UBERON:0000923;2.21e-13;4!UBERON:0010316;2.21e-13;4!UBERON:0005291;2.21e-13;4!UBERON:0002050;6.79e-11;5!UBERON:0005423;6.79e-11;5!UBERON:0002771;1.59e-07;2!UBERON:0004903;1.59e-07;2!UBERON:0003714;1.59e-07;2!UBERON:0005162;1.59e-07;2!UBERON:0000122;1.59e-07;2!UBERON:0002173;1.59e-07;2!UBERON:0002186;1.59e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000941,5.85e-14,1;UBERON:0001785,5.85e-14,1;UBERON:0002464,5.85e-14,1;UBERON:0004904,5.85e-14,1;UBERON:0001021,5.85e-14,1;UBERON:0003902,5.85e-14,1;UBERON:0005425,5.85e-14,1;UBERON:0000966,2.45e-09,6;UBERON:0005388,2.45e-09,6;UBERON:0001802,2.45e-09,6;UBERON:0002346,2.53e-08,86;UBERON:0003714,1.28e-07,2;UBERON:0005162,1.28e-07,2;UBERON:0000122,1.28e-07,2;UBERON:0002771,1.99e-07,2;UBERON:0004903,2.25e-07,2;UBERON:0002173,2.25e-07,2;UBERON:0002186,2.25e-07,2;UBERON:0003056,7.34e-07,61 | |||
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|short_description=p@chr6:73344775..73344779,+ | |short_description=p@chr6:73344775..73344779,+ | ||
}} | }} |
Latest revision as of 03:02, 31 July 2015
Short description: | p@chr6:73344775..73344779, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr6:73344775..73344779, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone matrix secreting cell | 1.87e-07 | 2 |
osteocyte | 1.87e-07 | 2 |
osteoclast | 1.87e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
cranial nerve II | 5.85e-14 | 1 |
cranial nerve | 5.85e-14 | 1 |
nerve trunk | 5.85e-14 | 1 |
nerve connecting eye with brain | 5.85e-14 | 1 |
nerve | 5.85e-14 | 1 |
retinal neural layer | 5.85e-14 | 1 |
presumptive neural retina | 5.85e-14 | 1 |
retina | 2.45e-09 | 6 |
photoreceptor array | 2.45e-09 | 6 |
posterior segment of eyeball | 2.45e-09 | 6 |
neurectoderm | 2.53e-08 | 86 |
neural tissue | 1.28e-07 | 2 |
multi cell component structure | 1.28e-07 | 2 |
neuron projection bundle | 1.28e-07 | 2 |
middle temporal gyrus | 1.99e-07 | 2 |
bronchoalveolar duct junction | 2.25e-07 | 2 |
alveolar duct | 2.25e-07 | 2 |
bronchiole | 2.25e-07 | 2 |
pre-chordal neural plate | 7.34e-07 | 61 |
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 1.71e-08 | 51 |
immune system cancer | 1.71e-08 | 51 |
giant cell tumor | 1.87e-07 | 2 |
bone giant cell tumor | 1.87e-07 | 2 |
lung adenocarcinoma | 2.25e-07 | 2 |