FFCP PHASE1:Hg19::chr6:72255927..72255937,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr6:72255927..72255937,+ | |||
|description=CAGE_peak_at_chr6:72255927..72255937,+ | |description=CAGE_peak_at_chr6:72255927..72255937,+ | ||
|id=chr6:72255927..72255937,+ | |id=chr6:72255927..72255937,+ | ||
|ontology_enrichment_celltype=CL:0000810!8.86e-17!1;CL:0000895!8.86e-17!1;CL:0002436!8.86e-17!1;CL:0002427!8.86e-17!1;CL:0002428!8.86e-17!1;CL:0002429!8.86e-17!1;CL:0002433!8.86e-17!1;CL:0002431!8.86e-17!1;CL:0002432!8.86e-17!1;CL:0002537!2.52e-13!5;CL:0000893!4.70e-09!2;CL:0002489!4.70e-09!2;CL:0000809!4.70e-09!2;CL:0000808!4.70e-09!2;CL:0000894!4.70e-09!2;CL:0000806!4.70e-09!2;CL:0000807!4.70e-09!2;CL:0000805!4.70e-09!2;CL:0002425!4.70e-09!2 | |ontology_enrichment_celltype=CL:0000810!8.86e-17!1;CL:0000895!8.86e-17!1;CL:0002436!8.86e-17!1;CL:0002427!8.86e-17!1;CL:0002428!8.86e-17!1;CL:0002429!8.86e-17!1;CL:0002433!8.86e-17!1;CL:0002431!8.86e-17!1;CL:0002432!8.86e-17!1;CL:0002537!2.52e-13!5;CL:0000893!4.70e-09!2;CL:0002489!4.70e-09!2;CL:0000809!4.70e-09!2;CL:0000808!4.70e-09!2;CL:0000894!4.70e-09!2;CL:0000806!4.70e-09!2;CL:0000807!4.70e-09!2;CL:0000805!4.70e-09!2;CL:0002425!4.70e-09!2 | ||
|ontology_enrichment_celltype_v019=CL:0002537;2.94e-11;5!CL:0000039;2.18e-08;7!CL:0000586;2.18e-08;7 | |||
|ontology_enrichment_celltype_v019_2=CL:0002537,2.94e-11,5;CL:0000039,2.18e-08,7;CL:0000586,2.18e-08,7 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:1799!1.93e-16!1;DOID:10165!1.93e-16!1;DOID:1798!1.93e-16!1 | |ontology_enrichment_disease=DOID:1799!1.93e-16!1;DOID:10165!1.93e-16!1;DOID:1798!1.93e-16!1 | ||
|ontology_enrichment_disease_v019=DOID:3095;4.96e-10;22!DOID:2994;4.96e-10;22 | |||
|ontology_enrichment_disease_v019_2=DOID:3095,4.96e-10,22;DOID:2994,4.96e-10,22 | |||
|ontology_enrichment_uberon=UBERON:0001282!4.72e-17!1;UBERON:0009842!4.72e-17!1;UBERON:0003704!4.72e-17!1;UBERON:0001171!4.72e-17!1;UBERON:0001172!4.72e-17!1;UBERON:0005631!1.73e-10!14;UBERON:0000158!1.73e-10!14;UBERON:0000305!8.72e-10!7;UBERON:0004871!1.13e-08!8 | |ontology_enrichment_uberon=UBERON:0001282!4.72e-17!1;UBERON:0009842!4.72e-17!1;UBERON:0003704!4.72e-17!1;UBERON:0001171!4.72e-17!1;UBERON:0001172!4.72e-17!1;UBERON:0005631!1.73e-10!14;UBERON:0000158!1.73e-10!14;UBERON:0000305!8.72e-10!7;UBERON:0004871!1.13e-08!8 | ||
|ontology_enrichment_uberon_v019=UBERON:0001282;1.46e-50;1!UBERON:0009842;1.46e-50;1!UBERON:0003704;1.46e-50;1!UBERON:0001171;1.46e-50;1!UBERON:0001172;1.46e-50;1!UBERON:0001280;6.76e-18;3!UBERON:0004647;6.76e-18;3!UBERON:0002394;8.82e-14;4!UBERON:0003928;8.82e-14;4!UBERON:0002294;1.89e-08;7!UBERON:0001173;1.89e-08;7!UBERON:0000305;2.03e-08;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001282,1.46e-50,1;UBERON:0009842,1.46e-50,1;UBERON:0003704,1.46e-50,1;UBERON:0001171,1.46e-50,1;UBERON:0001172,1.46e-50,1;UBERON:0001280,6.76e-18,3;UBERON:0004647,6.76e-18,3;UBERON:0005171,6.76e-18,3;UBERON:0002394,1.22e-09,6;UBERON:0003928,1.22e-09,6;UBERON:0000305,2.03e-08,7;UBERON:0004871,1.59e-07,8;UBERON:0002294,7.48e-07,9;UBERON:0001173,7.48e-07,9;UBERON:0004912,7.48e-07,9 | |||
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|short_description=p@chr6:72255927..72255937,+ | |short_description=p@chr6:72255927..72255937,+ | ||
}} | }} |
Latest revision as of 02:58, 31 July 2015
Short description: | p@chr6:72255927..72255937, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr6:72255927..72255937, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
amnion mesenchymal stem cell | 2.94e-11 | 5 |
germ line cell | 2.18e-08 | 7 |
germ cell | 2.18e-08 | 7 |
Ontology term | p-value | n |
---|---|---|
intralobular bile duct | 1.46e-50 | 1 |
acinus | 1.46e-50 | 1 |
intrahepatic bile duct | 1.46e-50 | 1 |
portal lobule | 1.46e-50 | 1 |
hepatic acinus | 1.46e-50 | 1 |
liver parenchyma | 6.76e-18 | 3 |
liver lobule | 6.76e-18 | 3 |
hepatic duct | 6.76e-18 | 3 |
bile duct | 1.22e-09 | 6 |
digestive system duct | 1.22e-09 | 6 |
amnion | 2.03e-08 | 7 |
somatic layer of lateral plate mesoderm | 1.59e-07 | 8 |
biliary system | 7.48e-07 | 9 |
biliary tree | 7.48e-07 | 9 |
biliary bud | 7.48e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
germ cell and embryonal cancer | 4.96e-10 | 22 |
germ cell cancer | 4.96e-10 | 22 |