FFCP PHASE1:Hg19::chr6:6799417..6799457,-: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr6:6799417..6799457,- | |||
|coexpression_cluster_id=C314 | |||
|description=CAGE_peak_at_chr6:6799417..6799457,- | |||
|id=chr6:6799417..6799457,- | |||
|ontology_enrichment_celltype=CL:0002009!1.08e-35!65;CL:0002194!1.30e-34!63;CL:0000576!1.30e-34!63;CL:0000040!1.30e-34!63;CL:0000559!1.30e-34!63;CL:0000557!5.88e-32!71;CL:0000839!2.51e-30!70;CL:0000763!7.62e-28!112;CL:0000049!7.62e-28!112;CL:0000766!2.81e-27!76;CL:0000738!3.16e-24!140;CL:0002032!4.81e-24!165;CL:0000837!4.81e-24!165;CL:0002031!5.68e-24!124;CL:0002087!7.19e-24!119;CL:0000037!1.39e-22!172;CL:0000566!1.39e-22!172;CL:0000988!1.07e-20!182;CL:0000990!4.55e-15!8;CL:0000235!7.50e-14!10;CL:0000860!4.29e-13!45;CL:0002057!1.21e-12!42;CL:0000451!4.09e-12!10;CL:0002619!3.62e-10!3;CL:0000453!5.17e-09!5;CL:0000840!2.67e-08!5;CL:0001029!2.67e-08!5 | |||
|ontology_enrichment_celltype_v019=CL:0000235;2.68e-52;6!CL:0002619;1.83e-27;3!CL:0000473;1.44e-14;39!CL:0000234;1.44e-14;39!CL:0000840;4.42e-14;5!CL:0000990;1.46e-09;8!CL:0000451;6.59e-08;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0000235,3.20e-52,6;CL:0002194,2.45e-30,59;CL:0000576,2.45e-30,59;CL:0000040,2.45e-30,59;CL:0000559,2.45e-30,59;CL:0002009,2.81e-29,61;CL:0002619,1.75e-27,3;CL:0000839,6.60e-27,66;CL:0000557,1.79e-26,67;CL:0000766,1.73e-24,72;CL:0002087,1.29e-16,115;CL:0002031,8.11e-16,120;CL:0000763,1.48e-15,108;CL:0000049,1.48e-15,108;CL:0000840,4.32e-14,5;CL:0001029,4.32e-14,5;CL:0000738,1.20e-13,136;CL:0000473,2.32e-13,48;CL:0000234,2.32e-13,48;CL:0002032,4.10e-11,161;CL:0000837,4.10e-11,161;CL:0000037,1.54e-10,168;CL:0000988,7.28e-10,177;CL:0000990,1.44e-09,8;CL:0000451,6.52e-08,10 | |||
|ontology_enrichment_development_v019=UBERON:0009143;2.97e-10;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!2.12e-27!80;UBERON:0001474!6.83e-25!86;UBERON:0002390!3.76e-24!102;UBERON:0003061!3.76e-24!102;UBERON:0002193!9.01e-23!112;UBERON:0002405!1.97e-20!115;UBERON:0004765!6.24e-20!101;UBERON:0001434!6.24e-20!101;UBERON:0002204!1.74e-10!167;UBERON:0003081!4.28e-08!216 | |||
|ontology_enrichment_uberon_v019=UBERON:0002372;4.85e-10;1!UBERON:0001961;4.85e-10;1!UBERON:0001744;4.85e-10;1!UBERON:0001042;4.85e-10;1!UBERON:0001735;4.85e-10;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,4.37e-23,76;UBERON:0001474,3.11e-21,82;UBERON:0002405,3.62e-21,93;UBERON:0004765,3.83e-19,90;UBERON:0002193,7.00e-18,108;UBERON:0002390,2.18e-17,98;UBERON:0003061,2.18e-17,98;UBERON:0001434,5.40e-17,100;UBERON:0002372,4.85e-10,1;UBERON:0001961,4.85e-10,1;UBERON:0001744,4.85e-10,1;UBERON:0001735,4.85e-10,1;UBERON:0002204,3.53e-09,167;UBERON:0003081,4.27e-07,203 | |||
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| ||
|short_description=p@chr6:6799417..6799457,- | |||
}} | }} |
Latest revision as of 02:46, 31 July 2015
Short description: | p@chr6:6799417..6799457, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr6:6799417..6799457, - |
Coexpression cluster: | C314_Macrophage_Dendritic_Monocytederived_CD14_Esophageal_Mast_Keratinocyte |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
macrophage | 3.20e-52 | 6 |
monopoietic cell | 2.45e-30 | 59 |
monocyte | 2.45e-30 | 59 |
monoblast | 2.45e-30 | 59 |
promonocyte | 2.45e-30 | 59 |
macrophage dendritic cell progenitor | 2.81e-29 | 61 |
adult endothelial progenitor cell | 1.75e-27 | 3 |
myeloid lineage restricted progenitor cell | 6.60e-27 | 66 |
granulocyte monocyte progenitor cell | 1.79e-26 | 67 |
myeloid leukocyte | 1.73e-24 | 72 |
nongranular leukocyte | 1.29e-16 | 115 |
hematopoietic lineage restricted progenitor cell | 8.11e-16 | 120 |
myeloid cell | 1.48e-15 | 108 |
common myeloid progenitor | 1.48e-15 | 108 |
immature conventional dendritic cell | 4.32e-14 | 5 |
common dendritic progenitor | 4.32e-14 | 5 |
leukocyte | 1.20e-13 | 136 |
defensive cell | 2.32e-13 | 48 |
phagocyte | 2.32e-13 | 48 |
hematopoietic oligopotent progenitor cell | 4.10e-11 | 161 |
hematopoietic multipotent progenitor cell | 4.10e-11 | 161 |
hematopoietic stem cell | 1.54e-10 | 168 |
hematopoietic cell | 7.28e-10 | 177 |
conventional dendritic cell | 1.44e-09 | 8 |
dendritic cell | 6.52e-08 | 10 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 4.37e-23 | 76 |
bone element | 3.11e-21 | 82 |
immune system | 3.62e-21 | 93 |
skeletal element | 3.83e-19 | 90 |
hemolymphoid system | 7.00e-18 | 108 |
hematopoietic system | 2.18e-17 | 98 |
blood island | 2.18e-17 | 98 |
skeletal system | 5.40e-17 | 100 |
tonsil | 4.85e-10 | 1 |
mucosa-associated lymphoid tissue | 4.85e-10 | 1 |
lymphoid tissue | 4.85e-10 | 1 |
tonsillar ring | 4.85e-10 | 1 |
musculoskeletal system | 3.53e-09 | 167 |
lateral plate mesoderm | 4.27e-07 | 203 |