FFCP PHASE1:Hg19::chr6:56497686..56497712,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr6:56497686..56497712,- | |||
|coexpression_cluster_id=C956 | |coexpression_cluster_id=C956 | ||
|description=CAGE_peak_at_chr6:56497686..56497712,- | |description=CAGE_peak_at_chr6:56497686..56497712,- | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0002076;8.18e-10;42!CL:0002623;1.03e-07;3!CL:0002251;8.85e-07;20 | |ontology_enrichment_celltype_v019=CL:0002076;8.18e-10;42!CL:0002623;1.03e-07;3!CL:0002251;8.85e-07;20 | ||
|ontology_enrichment_celltype_v019_2=CL:0002076,2.47e-11,42;CL:0000223,5.42e-09,58;CL:0002623,1.04e-07,3 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:17;9.31e-07;5!DOID:450;9.31e-07;5!DOID:66;9.31e-07;5!DOID:423;9.31e-07;5!DOID:0080000;9.31e-07;5!DOID:11722;9.31e-07;5 | |ontology_enrichment_disease_v019=DOID:17;9.31e-07;5!DOID:450;9.31e-07;5!DOID:66;9.31e-07;5!DOID:423;9.31e-07;5!DOID:0080000;9.31e-07;5!DOID:11722;9.31e-07;5 | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000033!2.82e-14!123;UBERON:0000153!9.79e-14!129;UBERON:0007811!9.79e-14!129;UBERON:0004121!1.42e-12!169;UBERON:0000924!1.86e-11!173;UBERON:0006601!1.86e-11!173;UBERON:0000955!1.71e-10!69;UBERON:0006238!1.71e-10!69;UBERON:0000475!5.89e-10!365;UBERON:0001017!8.23e-10!82;UBERON:0001049!1.93e-09!57;UBERON:0005068!1.93e-09!57;UBERON:0006241!1.93e-09!57;UBERON:0007135!1.93e-09!57;UBERON:0005743!2.53e-09!86;UBERON:0000073!3.28e-09!94;UBERON:0001016!3.28e-09!94;UBERON:0000062!8.65e-09!511;UBERON:0002616!2.58e-08!59;UBERON:0000161!2.88e-07!35;UBERON:0003080!3.83e-07!42;UBERON:0002780!7.57e-07!41;UBERON:0001890!7.57e-07!41;UBERON:0006240!7.57e-07!41;UBERON:0000467!8.36e-07!625;UBERON:0000468!8.88e-07!659 | |ontology_enrichment_uberon=UBERON:0000033!2.82e-14!123;UBERON:0000153!9.79e-14!129;UBERON:0007811!9.79e-14!129;UBERON:0004121!1.42e-12!169;UBERON:0000924!1.86e-11!173;UBERON:0006601!1.86e-11!173;UBERON:0000955!1.71e-10!69;UBERON:0006238!1.71e-10!69;UBERON:0000475!5.89e-10!365;UBERON:0001017!8.23e-10!82;UBERON:0001049!1.93e-09!57;UBERON:0005068!1.93e-09!57;UBERON:0006241!1.93e-09!57;UBERON:0007135!1.93e-09!57;UBERON:0005743!2.53e-09!86;UBERON:0000073!3.28e-09!94;UBERON:0001016!3.28e-09!94;UBERON:0000062!8.65e-09!511;UBERON:0002616!2.58e-08!59;UBERON:0000161!2.88e-07!35;UBERON:0003080!3.83e-07!42;UBERON:0002780!7.57e-07!41;UBERON:0001890!7.57e-07!41;UBERON:0006240!7.57e-07!41;UBERON:0000467!8.36e-07!625;UBERON:0000468!8.88e-07!659 | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2=UBERON:0004121,2.29e-10,171;UBERON:0000924,2.29e-10,171;UBERON:0006601,2.29e-10,171;UBERON:0010371,1.96e-09,104;UBERON:0001049,1.23e-08,56;UBERON:0005068,1.23e-08,56;UBERON:0006241,1.23e-08,56;UBERON:0007135,1.23e-08,56;UBERON:0003102,5.36e-08,99;UBERON:0000166,4.79e-07,22 | |||
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|phase1_expression=0.181678379270557,0.642301571672949,0.140954404095971,1.0007329835313,0.446961094427288,0,0,0,0,0,0,0.436882744260345,0.263766978228454,0.495065411840187,0.331397375727916,0,0.602694528023977,0,0,0,0,0,0.286235987131057,1.09499540058307,0.627713197974014,0.229240217243854,0.164201178899891,0.236132343941038,0,0,0,0,0,0,0,0,0,0,0.200544447470142,0,0,0,0.257575567634187,0,0,0,0.232429036905685,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.217188844705117,0,0,0,0,0,0,0.22465726229299,0,0.16072558669708,0,0.39783335439818,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.04535523804977,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0,0,1.00267582127178,0.289693037921647,0,0,0.189069634328136,0.665188192387692,0.527008714158756,0,0,0.741568885568859,0,0,0,0,0,0,0,0,0,0,0,0.275118041940067,0,0,0.71153252537342,1.00416183829401,0,0.760272105718513,0.732186172644509,0,0,0.17859945656816,0,0.112611480483322,0,0,0,0,0,0,0,0.759783069987479,0.397227542439656,0.573673241497627,1.41867352879343,0,0,0.24666754841716,0,0.134710672069688,0,0.151357427644931,0.576175924479999,0,0,0,0.149448680551801,0,0,0.140450806702248,0,0.491337269247072,0.309977343527296,0,0.741800787835671,0,0,0.336672227908132,0.250237039743928,0,0,0,0.300476117813194,0,3.94657198515496,2.34913127700424,1.05965950579781,1.50045548042201,0.721367704669072,1.54584324027377,0.744467425326359,1.5189869901714,0.292311015483596,1.00973509697646,0.368199594569197,0.323292113637624,2.4850671476163,0.403008392910561,0.339121184620975,1.35282597214308,1.63647672354501,1.14721838155602,0,0.132529768321485,0.116193942869518,0.310983165046111,0,0.72995471815166,0,1.28648187638577,0,0,0.721879481669586,0.354920400119532,0.168584690078102,0.241011029883482,0.110293972732394,0.435758888184812,0,0.134831308160164,0,0,0,0,0,0,2.53510069643662,1.96565443335525,0,0,0,0.343135620597051,1.75600456653801,0,1.60846355858609,4.35165692245089,0,0,1.44331342025273,0.115930404975077,0.117408694235822,0,0,0.190254152234598,0,0,0,0,0,0.93733833986777,1.84780341018745,2.26840155587818,0.716468181622786,2.61570544662566,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0.845302752556,0.531876233169741,0,0.257207374262142,0,0,0.428933980974443,0,0,0,0,0,0,0,1.19967589418468,0,0,0,0.718874566474748,0,0,0.579125226670317,1.2328579353023,0.358121926479791,0.112085143993527,0,0,0,0.76228387266739,0,0,0.167516265334349,0,0,0,0,0.613457458595699,0.500170521059677,0.542530047399471,1.03985430765404,1.07057393278297,0.473107245101804,0.585707074963566,0,0,1.03473071292505,0.664225598535437,0.368738337083406,0.521301686808497,0,0,0,0,0,0.303127571446259,0,0,0.248107807818777,0.306923946576125,0.280660094433074,0.640695746278505,0.511707249066704,0.160853921143607,0,0.462629081407967,0,0.0821271560138091,0.519254429183621,0.581051892299796,0,1.80455823272956,7.4585601038076,0.229628896329213,0.364182336013434,0.655622074797121,0,0.462092022626489,0,0,0.422206515571503,0,0,0.215915916102139,0,0,0,0,0,0,0,0,0,0.328014645699706,0.325378394664303,0.206082023295445,0.732555718546747,0.247528499761764,0,0,1.6068392984416,0.096670718292122,0.154048617114644,0,0.275673144969061,0.214840489736547,0.145016693914229,0.170453254832202,0.267096106940212,3.30569830721956,2.11409074101617,3.1903178123646,4.14746901507755,0.464845549297286,1.25924938732256,0,0,0,0.869932992075073,0,0,0,0.949138274156178,0.190630193923825,0,0.855877976067841,0,0,0.179872457583315,0.274537029736055,0.471249609382746,0,0,0,0,0.243713489631284,0,0.545999645631943,0.848432591722276,0,0,0,0,0,0,0,0.30982349809975,0,0.286822704408103,0,0,0,0.211107635297664,0.329294892959902,0,0,0.865999014529609,0,0,0.188287601553558,0,0,0,1.37834040124176,0,0,0,0,0,0,0,0,0,0.962479855263359,0,0,0,0,0,0.59873811429845,0.191505370132367,0,0,0.280797178113459,0,0.156679895773023,0,0,0,0,0.425846237690326,0,0,0,0,0,0,0,0,0,0,0,0.293016358543788,0,0,1.42068073403207,1.19372242368845,1.18785872333055,2.15012491469462,0.994147647766298,0.984685914873589,0,0.16480387422676,0,0,0.276283915531148,0.503865495708552,0.818149460017238,0.738508832766417,0.622079175323615,0,0,0,0.197286811273867,0,0,0.969332746095218,1.11321717794222,0,0,0,0.724999575434793,0.1137934482855,1.01701460117107,0,0,0,0.520874984799877,0,1.80894657938112,1.52581736317083,0.774054819518572,0.591095237907095,0,0.21787692703798,1.67308493134324,0.230850775511391,0,0,0.0897576444097721,0.217294743844016,0,0.0915975934018623,0,1.02193298195737,0.156980256395025,0,0,0,0,0,0,0.210998064528027,0.163232808159148,0,0.649165919226273,0,0.0884575645033392,0.611030144933625,0.296521128680622,0,0.208843899010911,0.337005664903385,0,1.40558667435203,0,0.391329237864179,0.728341138602278,0.394584402849391,0,0.61214552326098,0,0.300646838828985,0,0,0,0.313932918407225,0,0,2.91216813327591,0.173559738335131,0.195984794828755,0.522355239482415,0.17472666824203,1.89184635718778,0,0,0,0.387956065953678,0,0.451961481561065,0.274083849293502,0.19871461170299,0.63310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| ||
|short_description=p@chr6:56497686..56497712,- | |short_description=p@chr6:56497686..56497712,- | ||
}} | }} |
Latest revision as of 02:31, 31 July 2015
Short description: | p@chr6:56497686..56497712, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr6:56497686..56497712, - |
Coexpression cluster: | C956_salivary_Prostate_oral_thalamus_olfactory_Fibroblast_substantia |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endo-epithelial cell | 2.47e-11 | 42 |
endodermal cell | 5.42e-09 | 58 |
acinar cell of salivary gland | 1.04e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
ectoderm-derived structure | 2.29e-10 | 171 |
ectoderm | 2.29e-10 | 171 |
presumptive ectoderm | 2.29e-10 | 171 |
ecto-epithelium | 1.96e-09 | 104 |
neural tube | 1.23e-08 | 56 |
neural rod | 1.23e-08 | 56 |
future spinal cord | 1.23e-08 | 56 |
neural keel | 1.23e-08 | 56 |
surface structure | 5.36e-08 | 99 |
oral opening | 4.79e-07 | 22 |