FFCP PHASE1:Hg19::chr6:56485148..56485166,-: Difference between revisions
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m (moved FFCP PHASE1 hg19::chr6:56485148..56485166,- to FFCP PHASE1:Hg19::chr6:56485148..56485166,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr6:56485148..56485166,- | |||
|coexpression_cluster_id=C457 | |||
|description=CAGE_peak_at_chr6:56485148..56485166,- | |||
|id=chr6:56485148..56485166,- | |||
|ontology_enrichment_celltype=CL:0000066!3.13e-13!254;CL:0002076!1.51e-10!43;CL:0000223!4.08e-10!59;CL:0002251!1.21e-07!21 | |||
|ontology_enrichment_celltype_v019=CL:0002076;1.98e-24;42!CL:0002251;1.02e-22;20!CL:0002623;2.49e-16;3!CL:0000154;1.03e-13;6!CL:0000622;5.61e-10;5!CL:0000240;4.22e-08;6!CL:0000311;4.22e-08;6!CL:0000079;4.22e-08;6!CL:0000237;4.22e-08;6!CL:0002231;7.70e-08;3!CL:0002166;2.19e-07;3!CL:0002621;4.83e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002076,3.77e-30,42;CL:0000223,2.13e-23,58;CL:0002251,9.64e-23,20;CL:0000066,2.19e-16,253;CL:0002623,2.56e-16,3;CL:0000154,9.06e-14,6;CL:0000622,5.70e-10,5;CL:0000240,3.84e-08,6;CL:0000311,3.84e-08,6;CL:0000079,3.84e-08,6;CL:0000237,3.84e-08,6;CL:0000036,3.84e-08,6;CL:0000357,3.84e-08,6;CL:0000114,3.84e-08,6;CL:0002231,7.97e-08,3;CL:0002166,1.93e-07,3;CL:0002321,2.98e-07,250;CL:0000076,4.23e-07,63;CL:0002621,4.54e-07,3 | |||
|ontology_enrichment_development_v019=CL:0000223;1.83e-11;58!UBERON:0008814;2.09e-10;2!UBERON:0010056;2.09e-10;2!CL:0000357;4.22e-08;6!CL:0000114;4.22e-08;6 | |||
|ontology_enrichment_disease=DOID:305!3.12e-11!106;DOID:0050687!5.21e-11!143;DOID:1749!6.61e-11!14;DOID:14566!1.49e-08!239;DOID:162!1.60e-08!235 | |||
|ontology_enrichment_disease_v019=DOID:1749;8.68e-12;14 | |||
|ontology_enrichment_disease_v019_2=DOID:1749,8.77e-12,14 | |||
|ontology_enrichment_uberon=UBERON:0000161!2.13e-07!35;UBERON:0004121!3.41e-07!169;UBERON:0000153!3.98e-07!129;UBERON:0007811!3.98e-07!129;UBERON:0000924!4.57e-07!173;UBERON:0006601!4.57e-07!173;UBERON:0000033!5.33e-07!123;UBERON:0004119!7.17e-07!169;UBERON:0000925!7.17e-07!169;UBERON:0006595!7.17e-07!169 | |||
|ontology_enrichment_uberon_v019=UBERON:0000165;9.90e-13;28!UBERON:0000161;7.77e-12;19!UBERON:0000166;7.77e-12;19!UBERON:0003729;4.51e-09;13!UBERON:0001044;2.22e-08;6!UBERON:0003293;2.22e-08;6!UBERON:0003294;2.22e-08;6!UBERON:0010047;2.22e-08;6!UBERON:0003408;2.22e-08;6!UBERON:0000167;2.22e-08;6!UBERON:0000344;4.79e-08;20!UBERON:0001723;3.26e-07;3!UBERON:0001033;3.26e-07;3!UBERON:0001949;4.83e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000166,4.04e-13,22;UBERON:0000165,2.88e-12,29;UBERON:0000930,2.88e-12,29;UBERON:0000161,6.47e-12,36;UBERON:0003102,1.97e-10,99;UBERON:0003729,3.96e-09,13;UBERON:0000033,1.80e-08,56;UBERON:0001004,1.81e-08,74;UBERON:0001044,2.25e-08,6;UBERON:0003293,2.25e-08,6;UBERON:0003294,2.25e-08,6;UBERON:0010047,2.25e-08,6;UBERON:0000167,2.25e-08,6;UBERON:0000344,4.48e-08,20;UBERON:0004119,1.21e-07,160;UBERON:0000925,1.21e-07,160;UBERON:0006595,1.21e-07,160;UBERON:0000153,1.89e-07,62;UBERON:0007811,1.89e-07,62;UBERON:0001723,2.92e-07,3;UBERON:0001033,2.92e-07,3;UBERON:0010056,2.92e-07,3;UBERON:0001949,4.54e-07,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.730310090387373,0,0,0,0,0.286235987131057,0.273748850145768,0,0.152826811495903,0,0.0787107813136792,0,0,0,0,0.30120591877825,0,0,0,0,0,0,0,0,0,0,0,0,0.242584061187816,0,0.411167888021826,0,0,0,0,0,0,0,0.188242339542605,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0.211255286311942,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0,0.283604451492204,0.221729397462564,0.175669571386252,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.550236083880135,0,0,0,0,0,0,0,0,0,0.0892997282840798,0.22452937262617,0.112611480483322,0,0,0,0,0,0,0,0,0.264818361626438,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149448680551801,0,0,0,0,0.491337269247072,0,0,0,0,0,0.168336113954066,0,0,0,0,0,0,0.538168907066586,0.213557388818567,0.211931901159562,0,0,1.03056216018252,0.18611685633159,0.337552664482532,0,0,0,0,1.06502877754984,0.201504196455281,0.169560592310488,1.35282597214308,1.36373060295417,0,0.121973706129595,0,0.116193942869518,0.10366105501537,0,0,0,0,0,0,0,0,0.168584690078102,0,0.220587945464788,0.217879444092406,0.237270619111097,0,0,0,0,0,0,0,0,0.982827216677626,0,0,0,0.171567810298526,2.96325770603289,0,6.23279628952111,8.1477831739506,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.68771405118175,2.83550194484773,5.55262840757659,3.77824120068151,0.383382679165211,0,0,0,0,0,0,0,0,1.71072446022705,0,0,0,0,0,0,0,0,0,0.26593811658487,0,0,0,0,0,0,0,0,0,0,0,0,0.299918973546171,0,0,0,0.239624855491583,0,0,0,0.205476322550383,0,0,0,0,0,0,0,0,0.167516265334349,0,0,0,0,0,0,0,0.207970861530807,0,0,0.117141414992713,0,0,0,0,0,0.0868836144680828,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.308419387605311,0,0.246381468041427,0,0,0.120859449591622,4.41114234667227,17.4953878978203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.223874754722178,0,0,0,0,0,0.206082023295445,0.366277859273374,0,0,0,1.6068392984416,0,0,0.15350367472613,0,0,0.145016693914229,0.255679882248303,0,4.95854746082934,3.65161127993702,2.16941611240793,9.81230474298834,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.54907405947211,0.117812402345686,0,0,0,0,0.243713489631284,0,0.409499734223957,0.141405431953713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.769776901804097,0,0,0.0941438007767792,0,0,0,4.82419140434615,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0.199579371432817,0,0,0,0,0,0.156679895773023,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121360521749513,0,0.852408440419239,0.23874448473769,0,0.921482106297696,0,0.140669416410513,0.111308705022906,0,0,0,0,0,0.409074730008619,0.492339221844278,0,0,0.179021174675609,0,0,0,0,0,0.0927680981618513,0,0.260427761085233,0.0874599999961957,0,2.04828206913899,0.254253650292766,0,0.344743373241465,0,0.173624994933292,0,0.361789315876224,0,0.331737779793674,0.295547618953547,0,0,3.34616986268648,0,0.227884111694002,0,0,0.108647371922008,0.638002319463839,0,0,0,0,0,0,0,0,0.189753732724185,0,0,0.326465616318295,0,0.216388639742091,0,0,0,0.593042257361244,0,0,0,0,0,0,0.391329237864179,1.94224303627274,0,0,0,0.063186579628488,0,0,0,0,0.313932918407225,0,0,2.35746944122336,0,0.489961987071888,0.522355239482415,0,0.859930162358083,0,0.0730893170861856,0.246346371159628,0.0969890164884194,0,0,0.137041924646751,0,0.126621591911757,0.977756913674015,0.0801588202515337,0,0,0.288180834308212,0,0.343189995723929,0,0.372757606696298,2.59263438078475,0.407712618220842,0.104602846312333,0.101998217636322,0,0,0.273810757783986,0,0.429765441419957,0,0,0.687481272035051,0.717873024576814,0.199679000498991,0,0,0,0,0,0,0,0.0674035438541849,0.295282444544246,0,0,0.408610218334727,0,0.412618309791701,0,0,0,0,0.335434687599266,0,0.0524545881349981,0,0.896436696664224,1.53532157855556,0,0,0,0,0,0,0,0.164185041498678,0.170388021785422,0.113312091520126,0,0,0.517131825446202,0.39669780522807,0.171086837884329,0,0,0,0,0,0.197611631897944,0,0.638341257770182,0,0,0,0,0,0,0.122026264901963,0.751145584238999,0.573409195690071,0.221858103073705,0,1.10678907948985,0.624902039810533,0,0,0,0,0,0,0,0,0,0,0.889811221596536,0.228840068396924,0.302461847526478,0,0,0,0,0,0,0,0,0,1.52322084867518,0.406870733204662,0.181848659202559,0.322231671127465,0,0,0.800055529326307,0,0.336749488765919,0,0,0,0,0.453411851024545,0.231522474323834,0.244736704506468,0.179088841081487,0,0.219284049578707,0.530067437837643,0.964570191354574,0.506827321959218,0,0,1.21543982470953,0.276516872303462,0,0,0,0.655219697692825,0,0,0,0,0.516644938982447,0,0,0.979156554036111,0,0,0.107824811396682,0,0.327628914576042,0,0,0,0,0,0,0,0,1.2249819094128,0,0,0.478901577171454,0,0.252071696221718,0,0.322951291263702,0,0.88332946650923,0.353909170043221,10.6388587142574,1.61735932610474,0.762764190934334,0,0,0,0,0,0,1.31017534008077,0,0.0675375846183947,0.781078098613847,0.413373593002368,0,0,0,0.992422356778588,0.351742488719241,3.32182311862948,0,1.3451348888753,0,0,0,0,0,0.203909198930495,0,0.590969204419841,0.222462803784138,0.078493092850514,0.314231179832004,0,0,0,0.47775168788705,0.0714765441766563,0.158013611732727,0.23248285073625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| 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| ||
|short_description=p@chr6:56485148..56485166,- | |||
}} | }} |
Latest revision as of 02:30, 31 July 2015
Short description: | p@chr6:56485148..56485166, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr6:56485148..56485166, - |
Coexpression cluster: | C457_salivary_Prostate_oral_Small_Keratinocyte_Urothelial_Mammary |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endo-epithelial cell | 3.77e-30 | 42 |
endodermal cell | 2.13e-23 | 58 |
epithelial cell of alimentary canal | 9.64e-23 | 20 |
epithelial cell | 2.19e-16 | 253 |
acinar cell of salivary gland | 2.56e-16 | 3 |
protein secreting cell | 9.06e-14 | 6 |
acinar cell | 5.70e-10 | 5 |
stratified squamous epithelial cell | 3.84e-08 | 6 |
keratin accumulating cell | 3.84e-08 | 6 |
stratified epithelial cell | 3.84e-08 | 6 |
keratinizing barrier epithelial cell | 3.84e-08 | 6 |
epithelial fate stem cell | 3.84e-08 | 6 |
stratified epithelial stem cell | 3.84e-08 | 6 |
surface ectodermal cell | 3.84e-08 | 6 |
epithelial cell of prostate | 7.97e-08 | 3 |
epithelial cell of Malassez | 1.93e-07 | 3 |
embryonic cell | 2.98e-07 | 250 |
squamous epithelial cell | 4.23e-07 | 63 |
gingival epithelial cell | 4.54e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
oral opening | 4.04e-13 | 22 |
mouth | 2.88e-12 | 29 |
stomodeum | 2.88e-12 | 29 |
orifice | 6.47e-12 | 36 |
surface structure | 1.97e-10 | 99 |
mouth mucosa | 3.96e-09 | 13 |
head | 1.80e-08 | 56 |
respiratory system | 1.81e-08 | 74 |
saliva-secreting gland | 2.25e-08 | 6 |
gland of oral region | 2.25e-08 | 6 |
gland of foregut | 2.25e-08 | 6 |
oral gland | 2.25e-08 | 6 |
oral cavity | 2.25e-08 | 6 |
mucosa | 4.48e-08 | 20 |
endoderm-derived structure | 1.21e-07 | 160 |
endoderm | 1.21e-07 | 160 |
presumptive endoderm | 1.21e-07 | 160 |
anterior region of body | 1.89e-07 | 62 |
craniocervical region | 1.89e-07 | 62 |
tongue | 2.92e-07 | 3 |
gustatory system | 2.92e-07 | 3 |
future tongue | 2.92e-07 | 3 |
gingival epithelium | 4.54e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 8.77e-12 | 14 |