FFCP PHASE1:Hg19::chr6:56407223..56407227,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=454bp_to_BC038763_5end | |association_with_transcript=454bp_to_BC038763_5end | ||
|cluster_id=chr6:56407223..56407227,- | |||
|coexpression_cluster_id=C2865 | |||
|description=CAGE_peak_1_at_BC038763_5end | |description=CAGE_peak_1_at_BC038763_5end | ||
|id=chr6:56407223..56407227,- | |id=chr6:56407223..56407227,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0008947;6.95e-09;29!UBERON:0003104;5.38e-07;31 | |||
|ontology_enrichment_disease=DOID:0050687!3.64e-09!143 | |ontology_enrichment_disease=DOID:0050687!3.64e-09!143 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:0050687,2.91e-09,143 | |||
|ontology_enrichment_uberon=UBERON:0007023!3.81e-17!115;UBERON:0000062!5.45e-13!511;UBERON:0001007!9.23e-13!155;UBERON:0001555!9.23e-13!155;UBERON:0007026!9.23e-13!155;UBERON:0004921!4.70e-12!129;UBERON:0004185!4.70e-12!129;UBERON:0000468!1.19e-10!659;UBERON:0004119!1.66e-10!169;UBERON:0000925!1.66e-10!169;UBERON:0006595!1.66e-10!169;UBERON:0000477!7.19e-10!286;UBERON:0000481!1.62e-09!347;UBERON:0000480!2.80e-09!626;UBERON:0000467!4.34e-09!625;UBERON:0000077!5.61e-09!130;UBERON:0004111!1.64e-08!241;UBERON:0000073!5.80e-08!94;UBERON:0001016!5.80e-08!94;UBERON:0001017!1.94e-07!82;UBERON:0005743!2.32e-07!86;UBERON:0001049!3.85e-07!57;UBERON:0005068!3.85e-07!57;UBERON:0006241!3.85e-07!57;UBERON:0007135!3.85e-07!57;UBERON:0000922!9.80e-07!612 | |ontology_enrichment_uberon=UBERON:0007023!3.81e-17!115;UBERON:0000062!5.45e-13!511;UBERON:0001007!9.23e-13!155;UBERON:0001555!9.23e-13!155;UBERON:0007026!9.23e-13!155;UBERON:0004921!4.70e-12!129;UBERON:0004185!4.70e-12!129;UBERON:0000468!1.19e-10!659;UBERON:0004119!1.66e-10!169;UBERON:0000925!1.66e-10!169;UBERON:0006595!1.66e-10!169;UBERON:0000477!7.19e-10!286;UBERON:0000481!1.62e-09!347;UBERON:0000480!2.80e-09!626;UBERON:0000467!4.34e-09!625;UBERON:0000077!5.61e-09!130;UBERON:0004111!1.64e-08!241;UBERON:0000073!5.80e-08!94;UBERON:0001016!5.80e-08!94;UBERON:0001017!1.94e-07!82;UBERON:0005743!2.32e-07!86;UBERON:0001049!3.85e-07!57;UBERON:0005068!3.85e-07!57;UBERON:0006241!3.85e-07!57;UBERON:0007135!3.85e-07!57;UBERON:0000922!9.80e-07!612 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0011216,2.23e-19,223;UBERON:0007023,8.13e-18,114;UBERON:0001007,4.23e-13,145;UBERON:0001555,4.23e-13,145;UBERON:0007026,4.23e-13,145;UBERON:0004921,3.96e-12,118;UBERON:0004119,5.17e-11,160;UBERON:0000925,5.17e-11,160;UBERON:0006595,5.17e-11,160;UBERON:0001016,1.21e-07,89;UBERON:0004111,1.91e-07,240;UBERON:0001017,4.57e-07,81;UBERON:0000160,7.51e-07,17;UBERON:0005177,8.54e-07,101 | |||
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| ||
|short_description=p1@BC038763 | |short_description=p1@BC038763 | ||
}} | }} |
Latest revision as of 02:28, 31 July 2015
Short description: | p1@BC038763 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_BC038763_5end |
Coexpression cluster: | C2865_cervix_uterus_lung_rectum_rectal_Prostate_stomach |
Association with transcript: | 454bp_to_BC038763_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
organ system subdivision | 2.23e-19 | 223 |
adult organism | 8.13e-18 | 114 |
digestive system | 4.23e-13 | 145 |
digestive tract | 4.23e-13 | 145 |
primitive gut | 4.23e-13 | 145 |
subdivision of digestive tract | 3.96e-12 | 118 |
endoderm-derived structure | 5.17e-11 | 160 |
endoderm | 5.17e-11 | 160 |
presumptive endoderm | 5.17e-11 | 160 |
nervous system | 1.21e-07 | 89 |
anatomical conduit | 1.91e-07 | 240 |
central nervous system | 4.57e-07 | 81 |
intestine | 7.51e-07 | 17 |
trunk region element | 8.54e-07 | 101 |
Ontology term | p-value | n |
---|---|---|
cell type cancer | 2.91e-09 | 143 |