FFCP PHASE1:Hg19::chr6:56013734..56013753,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr6:56013734..56013753,- | |||
|description=CAGE_peak_at_chr6:56013734..56013753,- | |description=CAGE_peak_at_chr6:56013734..56013753,- | ||
|id=chr6:56013734..56013753,- | |id=chr6:56013734..56013753,- | ||
|ontology_enrichment_celltype=CL:0002551!2.38e-12!6;CL:0002367!1.92e-10!2;CL:0000188!2.91e-08!9 | |ontology_enrichment_celltype=CL:0002551!2.38e-12!6;CL:0002367!1.92e-10!2;CL:0000188!2.91e-08!9 | ||
|ontology_enrichment_celltype_v019=CL:0002550;4.72e-15;1!CL:0000167;1.72e-14;1!CL:0000164;1.72e-14;1!CL:0000502;1.72e-14;1!CL:0000172;1.72e-14;1!CL:0000173;1.72e-14;1!CL:0002598;3.95e-08;2!CL:0002363;4.37e-08;2!CL:0002367;6.80e-08;2!CL:0000188;9.10e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0002550,4.73e-15,1;CL:0000167,1.84e-14,1;CL:0000164,1.84e-14,1;CL:0000502,1.84e-14,1;CL:0000172,1.84e-14,1;CL:0000173,1.84e-14,1;CL:0002351,1.84e-14,1;CL:0002598,4.09e-08,2;CL:0002363,4.38e-08,2;CL:0000008,4.38e-08,2;CL:0002367,6.15e-08,2 | |||
|ontology_enrichment_development_v019=CL:0002351;1.72e-14;1!CL:0000008;4.37e-08;2 | |||
|ontology_enrichment_disease=DOID:171!2.61e-22!10;DOID:169!4.20e-13!6;DOID:3095!1.29e-09!22;DOID:2994!1.29e-09!22 | |||
|ontology_enrichment_disease_v019=DOID:4430;1.72e-14;1!DOID:169;7.10e-10;6!DOID:3193;3.95e-08;2!DOID:962;3.95e-08;2 | |||
|ontology_enrichment_disease_v019_2=DOID:4430,1.84e-14,1;DOID:169,7.10e-10,6;DOID:3193,3.82e-08,2;DOID:962,3.82e-08,2 | |||
|ontology_enrichment_uberon=UBERON:0005969!1.92e-10!2;UBERON:0003956!1.92e-10!2;UBERON:0000013!3.02e-09!5;UBERON:0002410!3.02e-09!5;UBERON:0002067!2.91e-08!9;UBERON:0004016!2.91e-08!9;UBERON:0010083!2.91e-08!9 | |ontology_enrichment_uberon=UBERON:0005969!1.92e-10!2;UBERON:0003956!1.92e-10!2;UBERON:0000013!3.02e-09!5;UBERON:0002410!3.02e-09!5;UBERON:0002067!2.91e-08!9;UBERON:0004016!2.91e-08!9;UBERON:0010083!2.91e-08!9 | ||
|ontology_enrichment_uberon_v019=UBERON:0003714;3.95e-08;2!UBERON:0003566;4.37e-08;2!UBERON:0001777;4.37e-08;2!UBERON:0005969;6.80e-08;2!UBERON:0003956;6.80e-08;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003714,3.82e-08,2;UBERON:0003566,4.38e-08,2;UBERON:0001777,4.38e-08,2;UBERON:0005969,6.15e-08,2;UBERON:0003956,6.15e-08,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.808264032418128,0,0,0,11.2474287280222,0,0,0.149448680551801,0.587172493218824,2.42809416552197,0.140450806702248,0.204154171254893,0,1.96318984233954,0,0,0,0,0,0.125118519871964,0,0,0,0,0,0,0.213557388818567,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.56131627434455,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.285955987316295,0,0,0,0,0,0,0,0,0,0,0,0,1.14861935834114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.271265023699736,0,0.178428988797162,0,0,0.300946099727719,0,0,0,0.184369168541703,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276242966807689,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.7400729292582,0,0.15350367472613,0,1.07420244868274,0,0,0.0890320356467374,0.165284915360978,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.70290178461057,0,0,0,0,0.117812402345686,0,0,0,0,0,0,0,0.424216295861138,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.379473173765715,1.74967360122491,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.689486746482929,1.16641845353302,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.866851769704557,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.91502377331055,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149254802886874,0.233713309847224,0,0,0,0,1.14420034198462,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.639471856518258,0,0.943595651135378,0,0.509197589862076,0.425149840203366,0,7.82102885162541,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.527613733078862,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.913158720509496,0,0,0,0,0,1.91244099532837,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.17838273550813,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.808264032418128,0,0,0,11.2474287280222,0,0,0.149448680551801,0.587172493218824,2.42809416552197,0.140450806702248,0.204154171254893,0,1.96318984233954,0,0,0,0,0,0.125118519871964,0,0,0,0,0,0,0.213557388818567,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.56131627434455,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.285955987316295,0,0,0,0,0,0,0,0,0,0,0,0,1.14861935834114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.271265023699736,0,0.178428988797162,0,0,0.300946099727719,0,0,0,0.184369168541703,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276242966807689,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.7400729292582,0,0.15350367472613,0,1.07420244868274,0,0,0.0890320356467374,0.165284915360978,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.70290178461057,0,0,0,0,0.117812402345686,0,0,0,0,0,0,0,0.424216295861138,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.379473173765715,1.74967360122491,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.689486746482929,1.16641845353302,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.866851769704557,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.91502377331055,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149254802886874,0.233713309847224,0,0,0,0,1.14420034198462,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.639471856518258,0,0.943595651135378,0,0.509197589862076,0.425149840203366,0,7.82102885162541,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.527613733078862,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.913158720509496,0,0,0,0,0,1.91244099532837,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.17838273550813,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr6:56013734..56013753,- | |short_description=p@chr6:56013734..56013753,- | ||
}} | }} |
Latest revision as of 02:28, 31 July 2015
Short description: | p@chr6:56013734..56013753, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr6:56013734..56013753, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast of the conjuctiva | 4.73e-15 | 1 |
peptide hormone secreting cell | 1.84e-14 | 1 |
enteroendocrine cell | 1.84e-14 | 1 |
type D enteroendocrine cell | 1.84e-14 | 1 |
somatostatin secreting cell | 1.84e-14 | 1 |
pancreatic D cell | 1.84e-14 | 1 |
progenitor cell of endocrine pancreas | 1.84e-14 | 1 |
bronchial smooth muscle cell | 4.09e-08 | 2 |
keratocyte | 4.38e-08 | 2 |
migratory cranial neural crest cell | 4.38e-08 | 2 |
trabecular meshwork cell | 6.15e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
neural tissue | 3.82e-08 | 2 |
head connective tissue | 4.38e-08 | 2 |
substantia propria of cornea | 4.38e-08 | 2 |
reticulum trabeculare | 6.15e-08 | 2 |
aqueous drainage system | 6.15e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
somatostatinoma | 1.84e-14 | 1 |
neuroendocrine tumor | 7.10e-10 | 6 |
peripheral nerve sheath neoplasm | 3.82e-08 | 2 |
neurofibroma | 3.82e-08 | 2 |