FFCP PHASE1:Hg19::chr6:53359400..53359406,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr6:53359400..53359406,+ | |||
|description=CAGE_peak_at_chr6:53359400..53359406,+ | |description=CAGE_peak_at_chr6:53359400..53359406,+ | ||
|id=chr6:53359400..53359406,+ | |id=chr6:53359400..53359406,+ | ||
|ontology_enrichment_celltype=CL:0000359!9.59e-45!32;CL:0000192!4.65e-38!42;CL:0000514!4.65e-38!42;CL:0000680!4.62e-28!57;CL:0000056!4.62e-28!57;CL:0000355!4.62e-28!57;CL:0000187!7.49e-28!54;CL:0002539!2.80e-26!10;CL:0000393!2.85e-26!60;CL:0000211!2.85e-26!60;CL:0000183!7.78e-25!59;CL:0002595!1.43e-14!5;CL:0000222!1.89e-11!119;CL:0000055!7.29e-11!180;CL:0002592!1.83e-09!3;CL:0002494!1.93e-07!16;CL:0000220!2.88e-07!246;CL:0002321!3.91e-07!248;CL:0002589!7.64e-07!2;CL:0000569!9.05e-07!4;CL:0000011!9.05e-07!4 | |ontology_enrichment_celltype=CL:0000359!9.59e-45!32;CL:0000192!4.65e-38!42;CL:0000514!4.65e-38!42;CL:0000680!4.62e-28!57;CL:0000056!4.62e-28!57;CL:0000355!4.62e-28!57;CL:0000187!7.49e-28!54;CL:0002539!2.80e-26!10;CL:0000393!2.85e-26!60;CL:0000211!2.85e-26!60;CL:0000183!7.78e-25!59;CL:0002595!1.43e-14!5;CL:0000222!1.89e-11!119;CL:0000055!7.29e-11!180;CL:0002592!1.83e-09!3;CL:0002494!1.93e-07!16;CL:0000220!2.88e-07!246;CL:0002321!3.91e-07!248;CL:0002589!7.64e-07!2;CL:0000569!9.05e-07!4;CL:0000011!9.05e-07!4 | ||
|ontology_enrichment_celltype_v019=CL:0000359;7.13e-91;32!CL:0002539;1.74e-55;10!CL:0000192;8.73e-55;43!CL:0002595;2.39e-36;5!CL:0000187;1.74e-28;55!CL:0002592;9.77e-23;3!CL:0000393;3.42e-22;61!CL:0000211;3.42e-22;61!CL:0002589;1.04e-15;2!CL:0002593;2.50e-15;2!CL:0002494;3.50e-11;16!CL:0002591;2.46e-08;1!CL:0000569;5.24e-08;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000359,5.38e-95,32;CL:0000192,9.37e-70,43;CL:0000514,9.37e-70,43;CL:0002539,1.26e-55,10;CL:0000187,1.01e-53,55;CL:0000680,9.51e-51,58;CL:0000056,9.51e-51,58;CL:0000355,9.51e-51,58;CL:0000393,4.57e-48,61;CL:0000211,4.57e-48,61;CL:0002595,2.07e-36,5;CL:0002592,1.09e-22,3;CL:0000222,2.54e-22,121;CL:0002589,1.08e-15,2;CL:0002593,2.24e-15,2;CL:0002494,3.62e-11,16;CL:0002321,6.51e-11,250;CL:0002591,2.29e-08,1;CL:0000569,5.24e-08,4;CL:0000011,5.24e-08,4 | |||
|ontology_enrichment_development_v019=CL:0000514;8.73e-55;43!CL:0000355;4.05e-26;58!CL:0000011;5.24e-08;4 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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| ||
|short_description=p@chr6:53359400..53359406,+ | |short_description=p@chr6:53359400..53359406,+ | ||
}} | }} |
Latest revision as of 02:22, 31 July 2015
Short description: | p@chr6:53359400..53359406, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr6:53359400..53359406, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
vascular associated smooth muscle cell | 5.38e-95 | 32 |
smooth muscle cell | 9.37e-70 | 43 |
smooth muscle myoblast | 9.37e-70 | 43 |
aortic smooth muscle cell | 1.26e-55 | 10 |
muscle cell | 1.01e-53 | 55 |
muscle precursor cell | 9.51e-51 | 58 |
myoblast | 9.51e-51 | 58 |
multi-potent skeletal muscle stem cell | 9.51e-51 | 58 |
electrically responsive cell | 4.57e-48 | 61 |
electrically active cell | 4.57e-48 | 61 |
smooth muscle cell of the subclavian artery | 2.07e-36 | 5 |
smooth muscle cell of the coronary artery | 1.09e-22 | 3 |
mesodermal cell | 2.54e-22 | 121 |
smooth muscle cell of the brachiocephalic vasculature | 1.08e-15 | 2 |
smooth muscle cell of the internal thoracic artery | 2.24e-15 | 2 |
cardiocyte | 3.62e-11 | 16 |
embryonic cell | 6.51e-11 | 250 |
smooth muscle cell of the pulmonary artery | 2.29e-08 | 1 |
cardiac mesenchymal cell | 5.24e-08 | 4 |
migratory trunk neural crest cell | 5.24e-08 | 4 |