FFCP PHASE1:Hg19::chr6:46700055..46700067,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr6:46700055..46700067,- | |||
|coexpression_cluster_id=C166 | |||
|description=CAGE_peak_at_chr6:46700055..46700067,- | |description=CAGE_peak_at_chr6:46700055..46700067,- | ||
|id=chr6:46700055..46700067,- | |id=chr6:46700055..46700067,- | ||
|ontology_enrichment_celltype=CL:0002194!1.45e-46!63;CL:0000576!1.45e-46!63;CL:0000040!1.45e-46!63;CL:0000559!1.45e-46!63;CL:0002009!5.69e-45!65;CL:0000839!2.21e-41!70;CL:0000557!1.01e-40!71;CL:0000766!1.09e-37!76;CL:0000763!9.00e-24!112;CL:0000049!9.00e-24!112;CL:0002087!4.90e-22!119;CL:0002031!6.46e-21!124;CL:0002057!2.00e-19!42;CL:0000235!4.64e-18!10;CL:0000860!6.31e-18!45;CL:0000738!7.24e-18!140;CL:0002619!6.96e-16!3;CL:0002032!2.76e-14!165;CL:0000837!2.76e-14!165;CL:0000037!1.81e-13!172;CL:0000566!1.81e-13!172;CL:0000988!2.06e-12!182;CL:0000840!2.14e-08!5;CL:0001029!2.14e-08!5 | |ontology_enrichment_celltype=CL:0002194!1.45e-46!63;CL:0000576!1.45e-46!63;CL:0000040!1.45e-46!63;CL:0000559!1.45e-46!63;CL:0002009!5.69e-45!65;CL:0000839!2.21e-41!70;CL:0000557!1.01e-40!71;CL:0000766!1.09e-37!76;CL:0000763!9.00e-24!112;CL:0000049!9.00e-24!112;CL:0002087!4.90e-22!119;CL:0002031!6.46e-21!124;CL:0002057!2.00e-19!42;CL:0000235!4.64e-18!10;CL:0000860!6.31e-18!45;CL:0000738!7.24e-18!140;CL:0002619!6.96e-16!3;CL:0002032!2.76e-14!165;CL:0000837!2.76e-14!165;CL:0000037!1.81e-13!172;CL:0000566!1.81e-13!172;CL:0000988!2.06e-12!182;CL:0000840!2.14e-08!5;CL:0001029!2.14e-08!5 | ||
|ontology_enrichment_celltype_v019=CL:0000235;6.31e-107;6!CL:0000840;5.39e-28;5!CL:0002619;1.45e-24;3!CL:0000990;6.40e-19;8!CL:0000451;1.31e-15;10!CL:0000473;3.21e-14;39!CL:0000234;3.21e-14;39!CL:0000766;1.56e-07;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000235,7.59e-107,6;CL:0002194,1.37e-35,59;CL:0000576,1.37e-35,59;CL:0000040,1.37e-35,59;CL:0000559,1.37e-35,59;CL:0002009,1.98e-34,61;CL:0000839,7.93e-32,66;CL:0000557,2.37e-31,67;CL:0000766,3.58e-29,72;CL:0000840,5.40e-28,5;CL:0001029,5.40e-28,5;CL:0002619,1.29e-24,3;CL:0000763,2.30e-19,108;CL:0000049,2.30e-19,108;CL:0000990,6.40e-19,8;CL:0002087,3.68e-18,115;CL:0002031,2.20e-17,120;CL:0000451,1.31e-15,10;CL:0000738,2.78e-15,136;CL:0000473,2.16e-13,48;CL:0000234,2.16e-13,48;CL:0002032,8.04e-13,161;CL:0000837,8.04e-13,161;CL:0000037,2.92e-12,168;CL:0000988,1.32e-11,177 | |||
|ontology_enrichment_development_v019=CL:0000049;9.80e-08;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!2.54e-36!102;UBERON:0003061!2.54e-36!102;UBERON:0002371!1.56e-35!80;UBERON:0001474!1.14e-32!86;UBERON:0002193!1.61e-32!112;UBERON:0002405!1.66e-31!115;UBERON:0004765!5.55e-27!101;UBERON:0001434!5.55e-27!101;UBERON:0002204!2.13e-15!167;UBERON:0003081!5.73e-15!216;UBERON:0004177!1.37e-10!7;UBERON:0002106!4.99e-07!3;UBERON:0004854!4.99e-07!3;UBERON:0009034!4.99e-07!3;UBERON:0002095!4.99e-07!3;UBERON:0004782!4.99e-07!3;UBERON:0003281!4.99e-07!3;UBERON:0009664!4.99e-07!3;UBERON:0002296!4.99e-07!3;UBERON:0005602!4.99e-07!3;UBERON:0001179!4.99e-07!3;UBERON:0006293!4.99e-07!3 | |ontology_enrichment_uberon=UBERON:0002390!2.54e-36!102;UBERON:0003061!2.54e-36!102;UBERON:0002371!1.56e-35!80;UBERON:0001474!1.14e-32!86;UBERON:0002193!1.61e-32!112;UBERON:0002405!1.66e-31!115;UBERON:0004765!5.55e-27!101;UBERON:0001434!5.55e-27!101;UBERON:0002204!2.13e-15!167;UBERON:0003081!5.73e-15!216;UBERON:0004177!1.37e-10!7;UBERON:0002106!4.99e-07!3;UBERON:0004854!4.99e-07!3;UBERON:0009034!4.99e-07!3;UBERON:0002095!4.99e-07!3;UBERON:0004782!4.99e-07!3;UBERON:0003281!4.99e-07!3;UBERON:0009664!4.99e-07!3;UBERON:0002296!4.99e-07!3;UBERON:0005602!4.99e-07!3;UBERON:0001179!4.99e-07!3;UBERON:0006293!4.99e-07!3 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.24e-27,76;UBERON:0001474,1.34e-25,82;UBERON:0004765,2.65e-23,90;UBERON:0002405,1.53e-22,93;UBERON:0002390,2.24e-21,98;UBERON:0003061,2.24e-21,98;UBERON:0001434,6.08e-21,100;UBERON:0002193,2.30e-19,108;UBERON:0002204,2.44e-12,167;UBERON:0003081,4.95e-10,203 | |||
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|short_description=p@chr6:46700055..46700067,- | |short_description=p@chr6:46700055..46700067,- | ||
}} | }} |
Latest revision as of 02:09, 31 July 2015
Short description: | p@chr6:46700055..46700067, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr6:46700055..46700067, - |
Coexpression cluster: | C166_Macrophage_Monocytederived_Dendritic_adipose_lymph_CD14_lung |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
macrophage | 7.59e-107 | 6 |
monopoietic cell | 1.37e-35 | 59 |
monocyte | 1.37e-35 | 59 |
monoblast | 1.37e-35 | 59 |
promonocyte | 1.37e-35 | 59 |
macrophage dendritic cell progenitor | 1.98e-34 | 61 |
myeloid lineage restricted progenitor cell | 7.93e-32 | 66 |
granulocyte monocyte progenitor cell | 2.37e-31 | 67 |
myeloid leukocyte | 3.58e-29 | 72 |
immature conventional dendritic cell | 5.40e-28 | 5 |
common dendritic progenitor | 5.40e-28 | 5 |
adult endothelial progenitor cell | 1.29e-24 | 3 |
myeloid cell | 2.30e-19 | 108 |
common myeloid progenitor | 2.30e-19 | 108 |
conventional dendritic cell | 6.40e-19 | 8 |
nongranular leukocyte | 3.68e-18 | 115 |
hematopoietic lineage restricted progenitor cell | 2.20e-17 | 120 |
dendritic cell | 1.31e-15 | 10 |
leukocyte | 2.78e-15 | 136 |
defensive cell | 2.16e-13 | 48 |
phagocyte | 2.16e-13 | 48 |
hematopoietic oligopotent progenitor cell | 8.04e-13 | 161 |
hematopoietic multipotent progenitor cell | 8.04e-13 | 161 |
hematopoietic stem cell | 2.92e-12 | 168 |
hematopoietic cell | 1.32e-11 | 177 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.24e-27 | 76 |
bone element | 1.34e-25 | 82 |
skeletal element | 2.65e-23 | 90 |
immune system | 1.53e-22 | 93 |
hematopoietic system | 2.24e-21 | 98 |
blood island | 2.24e-21 | 98 |
skeletal system | 6.08e-21 | 100 |
hemolymphoid system | 2.30e-19 | 108 |
musculoskeletal system | 2.44e-12 | 167 |
lateral plate mesoderm | 4.95e-10 | 203 |